ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2R8S:R121:R145

Extra

PDB:
ATOM 1 O3' C A 120 93.933 -22.703 7.091 1.00 56.65 O
ATOM 2 P U A 121 95.207 -22.461 6.157 1.00 58.16 P
ATOM 3 OP1 U A 121 96.205 -21.758 6.997 1.00 55.53 O
ATOM 4 OP2 U A 121 94.762 -21.884 4.865 1.00 53.66 O
ATOM 5 O5' U A 121 95.744 -23.940 5.854 1.00 57.36 O
ATOM 6 C5' U A 121 96.360 -24.670 6.901 1.00 57.17 C
ATOM 7 C4' U A 121 96.468 -26.134 6.545 1.00 54.77 C
ATOM 8 O4' U A 121 95.187 -26.651 6.129 1.00 53.11 O
ATOM 9 C3' U A 121 97.363 -26.425 5.365 1.00 53.97 C
ATOM 10 O3' U A 121 98.730 -26.349 5.773 1.00 57.73 O
ATOM 11 C2' U A 121 96.897 -27.829 4.986 1.00 53.18 C
ATOM 12 O2' U A 121 97.402 -28.867 5.812 1.00 47.34 O
ATOM 13 C1' U A 121 95.393 -27.686 5.180 1.00 51.80 C
ATOM 14 N1 U A 121 94.621 -27.391 3.923 1.00 51.69 N
ATOM 15 C2 U A 121 94.377 -28.428 3.037 1.00 49.14 C
ATOM 16 O2 U A 121 94.761 -29.572 3.222 1.00 46.76 O
ATOM 17 N3 U A 121 93.640 -28.085 1.926 1.00 47.14 N
ATOM 18 C4 U A 121 93.161 -26.821 1.615 1.00 50.15 C
ATOM 19 O4 U A 121 92.521 -26.648 0.577 1.00 48.89 O
ATOM 20 C5 U A 121 93.451 -25.793 2.583 1.00 48.59 C
ATOM 21 C6 U A 121 94.158 -26.107 3.674 1.00 50.60 C
ATOM 22 P A A 122 99.862 -25.881 4.736 1.00 57.73 P
ATOM 23 OP1 A A 122 101.157 -25.953 5.452 1.00 56.29 O
ATOM 24 OP2 A A 122 99.415 -24.609 4.115 1.00 55.87 O
ATOM 25 O5' A A 122 99.811 -27.003 3.596 1.00 52.40 O
TER

ATOM 1 O3' U B 144 91.684 -27.275 -5.838 1.00 62.64 O
ATOM 2 P A B 145 90.832 -27.670 -4.535 1.00 65.66 P
ATOM 3 OP1 A B 145 89.414 -27.738 -4.953 1.00 63.73 O
ATOM 4 OP2 A B 145 91.222 -26.777 -3.420 1.00 63.99 O
ATOM 5 O5' A B 145 91.354 -29.145 -4.183 1.00 65.54 O
ATOM 6 C5' A B 145 91.267 -30.207 -5.136 1.00 66.22 C
ATOM 7 C4' A B 145 91.012 -31.532 -4.447 1.00 65.10 C
ATOM 8 O4' A B 145 92.118 -31.810 -3.553 1.00 64.49 O
ATOM 9 C3' A B 145 89.755 -31.582 -3.582 1.00 67.27 C
ATOM 10 O3' A B 145 89.129 -32.856 -3.664 1.00 71.18 O
ATOM 11 C2' A B 145 90.286 -31.331 -2.174 1.00 66.58 C
ATOM 12 O2' A B 145 89.478 -31.876 -1.146 1.00 64.21 O
ATOM 13 C1' A B 145 91.617 -32.066 -2.251 1.00 65.00 C
ATOM 14 N9 A B 145 92.588 -31.680 -1.224 1.00 65.33 N
ATOM 15 C8 A B 145 92.750 -30.455 -0.627 1.00 64.34 C
ATOM 16 N7 A B 145 93.707 -30.428 0.271 1.00 63.47 N
ATOM 17 C5 A B 145 94.206 -31.718 0.267 1.00 65.72 C
ATOM 18 C6 A B 145 95.236 -32.341 1.000 1.00 64.98 C
ATOM 19 N6 A B 145 95.966 -31.691 1.910 1.00 65.09 N
ATOM 20 N1 A B 145 95.482 -33.652 0.762 1.00 64.49 N
ATOM 21 C2 A B 145 94.741 -34.291 -0.154 1.00 64.24 C
ATOM 22 N3 A B 145 93.746 -33.812 -0.903 1.00 64.25 N
ATOM 23 C4 A B 145 93.529 -32.507 -0.648 1.00 65.66 C
ATOM 24 P U B 146 88.059 -33.178 -4.807 1.00 74.96 P
ATOM 25 OP1 U B 146 88.456 -32.454 -6.038 1.00 74.63 O
ATOM 26 OP2 U B 146 86.713 -32.975 -4.224 1.00 73.58 O
ATOM 27 O5' U B 146 88.287 -34.742 -5.069 1.00 76.14 O
TER

Atoms:
C4: (93.161,-26.821,1.615)
N3: (93.640,-28.085,1.926)
OP1: (96.205,-21.758,6.997)
OP2: (94.762,-21.884,4.865)
C2: (94.377,-28.428,3.037)
C1': (95.393,-27.686,5.180)
C3': (97.363,-26.425,5.365)
O5': (95.744,-23.940,5.854)
O4': (95.187,-26.651,6.129)
C5': (96.360,-24.670,6.901)
P: (95.207,-22.461,6.157)
C4': (96.468,-26.134,6.545)
C2': (96.897,-27.829,4.986)
O2': (97.402,-28.867,5.812)
N1: (94.621,-27.391,3.923)
O4: (92.521,-26.648,0.577)
O2: (94.761,-29.572,3.222)
C6: (94.158,-26.107,3.674)
C5: (93.451,-25.793,2.583)
O3': (98.730,-26.349,5.773)
OP1: (89.414,-27.738,-4.953)
OP2: (91.222,-26.777,-3.420)
C3': (89.755,-31.582,-3.582)
C1': (91.617,-32.066,-2.251)
C5': (91.267,-30.207,-5.136)
O4': (92.118,-31.810,-3.553)
C8: (92.750,-30.455,-0.627)
O2': (89.478,-31.876,-1.146)
C6: (95.236,-32.341,1.000)
C5: (94.206,-31.718,0.267)
C4: (93.529,-32.507,-0.648)
P: (90.832,-27.670,-4.535)
C4': (91.012,-31.532,-4.447)
C2': (90.286,-31.331,-2.174)
C2: (94.741,-34.291,-0.154)
N1: (95.482,-33.652,0.762)
N3: (93.746,-33.812,-0.903)
N6: (95.966,-31.691,1.910)
N7: (93.707,-30.428,0.271)
N9: (92.588,-31.680,-1.224)
O5': (91.354,-29.145,-4.183)
O3': (89.129,-32.856,-3.664)
Image (generated by PyMOL):
PyMOL image
show in jmol