Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A498:A502
Extra
PDB:
ATOM 1 O3' G A 497 -22.416-112.629 29.080 1.00 0.01 O
ATOM 2 P U A 498 -23.514-113.126 30.124 1.00 0.01 P
ATOM 3 OP1 U A 498 -22.812-113.933 31.135 1.00 0.01 O
ATOM 4 OP2 U A 498 -24.591-113.753 29.346 1.00 0.01 O
ATOM 5 O5' U A 498 -24.026-111.773 30.771 1.00 0.01 O
ATOM 6 C5' U A 498 -23.255-111.086 31.735 1.00 0.01 C
ATOM 7 C4' U A 498 -24.002-109.902 32.289 1.00 0.01 C
ATOM 8 O4' U A 498 -24.343-108.987 31.228 1.00 0.01 O
ATOM 9 C3' U A 498 -25.325-110.209 32.931 1.00 0.01 C
ATOM 10 O3' U A 498 -25.178-110.658 34.244 1.00 0.01 O
ATOM 11 C2' U A 498 -26.050-108.890 32.842 1.00 0.01 C
ATOM 12 O2' U A 498 -25.566-108.005 33.834 1.00 0.01 O
ATOM 13 C1' U A 498 -25.584-108.387 31.497 1.00 0.01 C
ATOM 14 N1 U A 498 -26.520-108.711 30.405 1.00 0.01 N
ATOM 15 C2 U A 498 -27.439-107.749 30.151 1.00 0.01 C
ATOM 16 O2 U A 498 -27.475-106.778 30.851 1.00 0.01 O
ATOM 17 N3 U A 498 -28.314-107.940 29.126 1.00 0.01 N
ATOM 18 C4 U A 498 -28.349-109.024 28.310 1.00 0.01 C
ATOM 19 O4 U A 498 -29.192-109.065 27.424 1.00 0.01 O
ATOM 20 C5 U A 498 -27.350-110.006 28.607 1.00 0.01 C
ATOM 21 C6 U A 498 -26.483-109.815 29.610 1.00 0.01 C
ATOM 22 P G A 499 -25.912-111.976 34.700 1.00 0.01 P
ATOM 23 OP1 G A 499 -25.373-112.349 36.035 1.00 0.01 O
ATOM 24 OP2 G A 499 -25.774-112.923 33.573 1.00 0.01 O
ATOM 25 O5' G A 499 -27.427-111.510 34.836 1.00 0.01 O
TER
ATOM 1 O3' A B 501 -36.075-111.270 27.684 1.00 0.05 O
ATOM 2 P A B 502 -34.947-110.828 26.637 1.00 0.01 P
ATOM 3 OP1 A B 502 -35.425-111.224 25.300 1.00 0.01 O
ATOM 4 OP2 A B 502 -33.671-111.366 27.116 1.00 0.01 O
ATOM 5 O5' A B 502 -34.942-109.247 26.754 1.00 0.01 O
ATOM 6 C5' A B 502 -35.827-108.466 25.979 1.00 0.01 C
ATOM 7 C4' A B 502 -35.361-107.042 25.840 1.00 0.01 C
ATOM 8 O4' A B 502 -34.626-106.649 27.015 1.00 0.01 O
ATOM 9 C3' A B 502 -34.461-106.751 24.640 1.00 0.01 C
ATOM 10 O3' A B 502 -35.123-105.864 23.742 1.00 0.01 O
ATOM 11 C2' A B 502 -33.213-106.067 25.222 1.00 0.01 C
ATOM 12 O2' A B 502 -32.814-104.900 24.516 1.00 0.01 O
ATOM 13 C1' A B 502 -33.623-105.728 26.652 1.00 0.01 C
ATOM 14 N9 A B 502 -32.527-105.815 27.626 1.00 0.01 N
ATOM 15 C8 A B 502 -31.643-106.832 27.839 1.00 0.01 C
ATOM 16 N7 A B 502 -30.768-106.617 28.790 1.00 0.01 N
ATOM 17 C5 A B 502 -31.098-105.362 29.241 1.00 0.01 C
ATOM 18 C6 A B 502 -30.559-104.556 30.247 1.00 0.01 C
ATOM 19 N6 A B 502 -29.525-104.882 31.030 1.00 0.01 N
ATOM 20 N1 A B 502 -31.139-103.365 30.423 1.00 0.01 N
ATOM 21 C2 A B 502 -32.166-103.021 29.661 1.00 0.01 C
ATOM 22 N3 A B 502 -32.756-103.690 28.703 1.00 0.01 N
ATOM 23 C4 A B 502 -32.168-104.864 28.533 1.00 0.01 C
ATOM 24 P A B 503 -36.143-106.462 22.677 1.00 27.93 P
ATOM 25 OP1 A B 503 -35.476-107.593 22.022 1.00 27.93 O
ATOM 26 OP2 A B 503 -36.609-105.347 21.866 1.00 27.93 O
ATOM 27 O5' A B 503 -37.324-106.995 23.592 1.00 27.93 O
TER
ATOM 2 P U A 498 -23.514-113.126 30.124 1.00 0.01 P
ATOM 3 OP1 U A 498 -22.812-113.933 31.135 1.00 0.01 O
ATOM 4 OP2 U A 498 -24.591-113.753 29.346 1.00 0.01 O
ATOM 5 O5' U A 498 -24.026-111.773 30.771 1.00 0.01 O
ATOM 6 C5' U A 498 -23.255-111.086 31.735 1.00 0.01 C
ATOM 7 C4' U A 498 -24.002-109.902 32.289 1.00 0.01 C
ATOM 8 O4' U A 498 -24.343-108.987 31.228 1.00 0.01 O
ATOM 9 C3' U A 498 -25.325-110.209 32.931 1.00 0.01 C
ATOM 10 O3' U A 498 -25.178-110.658 34.244 1.00 0.01 O
ATOM 11 C2' U A 498 -26.050-108.890 32.842 1.00 0.01 C
ATOM 12 O2' U A 498 -25.566-108.005 33.834 1.00 0.01 O
ATOM 13 C1' U A 498 -25.584-108.387 31.497 1.00 0.01 C
ATOM 14 N1 U A 498 -26.520-108.711 30.405 1.00 0.01 N
ATOM 15 C2 U A 498 -27.439-107.749 30.151 1.00 0.01 C
ATOM 16 O2 U A 498 -27.475-106.778 30.851 1.00 0.01 O
ATOM 17 N3 U A 498 -28.314-107.940 29.126 1.00 0.01 N
ATOM 18 C4 U A 498 -28.349-109.024 28.310 1.00 0.01 C
ATOM 19 O4 U A 498 -29.192-109.065 27.424 1.00 0.01 O
ATOM 20 C5 U A 498 -27.350-110.006 28.607 1.00 0.01 C
ATOM 21 C6 U A 498 -26.483-109.815 29.610 1.00 0.01 C
ATOM 22 P G A 499 -25.912-111.976 34.700 1.00 0.01 P
ATOM 23 OP1 G A 499 -25.373-112.349 36.035 1.00 0.01 O
ATOM 24 OP2 G A 499 -25.774-112.923 33.573 1.00 0.01 O
ATOM 25 O5' G A 499 -27.427-111.510 34.836 1.00 0.01 O
TER
ATOM 1 O3' A B 501 -36.075-111.270 27.684 1.00 0.05 O
ATOM 2 P A B 502 -34.947-110.828 26.637 1.00 0.01 P
ATOM 3 OP1 A B 502 -35.425-111.224 25.300 1.00 0.01 O
ATOM 4 OP2 A B 502 -33.671-111.366 27.116 1.00 0.01 O
ATOM 5 O5' A B 502 -34.942-109.247 26.754 1.00 0.01 O
ATOM 6 C5' A B 502 -35.827-108.466 25.979 1.00 0.01 C
ATOM 7 C4' A B 502 -35.361-107.042 25.840 1.00 0.01 C
ATOM 8 O4' A B 502 -34.626-106.649 27.015 1.00 0.01 O
ATOM 9 C3' A B 502 -34.461-106.751 24.640 1.00 0.01 C
ATOM 10 O3' A B 502 -35.123-105.864 23.742 1.00 0.01 O
ATOM 11 C2' A B 502 -33.213-106.067 25.222 1.00 0.01 C
ATOM 12 O2' A B 502 -32.814-104.900 24.516 1.00 0.01 O
ATOM 13 C1' A B 502 -33.623-105.728 26.652 1.00 0.01 C
ATOM 14 N9 A B 502 -32.527-105.815 27.626 1.00 0.01 N
ATOM 15 C8 A B 502 -31.643-106.832 27.839 1.00 0.01 C
ATOM 16 N7 A B 502 -30.768-106.617 28.790 1.00 0.01 N
ATOM 17 C5 A B 502 -31.098-105.362 29.241 1.00 0.01 C
ATOM 18 C6 A B 502 -30.559-104.556 30.247 1.00 0.01 C
ATOM 19 N6 A B 502 -29.525-104.882 31.030 1.00 0.01 N
ATOM 20 N1 A B 502 -31.139-103.365 30.423 1.00 0.01 N
ATOM 21 C2 A B 502 -32.166-103.021 29.661 1.00 0.01 C
ATOM 22 N3 A B 502 -32.756-103.690 28.703 1.00 0.01 N
ATOM 23 C4 A B 502 -32.168-104.864 28.533 1.00 0.01 C
ATOM 24 P A B 503 -36.143-106.462 22.677 1.00 27.93 P
ATOM 25 OP1 A B 503 -35.476-107.593 22.022 1.00 27.93 O
ATOM 26 OP2 A B 503 -36.609-105.347 21.866 1.00 27.93 O
ATOM 27 O5' A B 503 -37.324-106.995 23.592 1.00 27.93 O
TER
Atoms:
C4: (-28.349,-109.024,28.310)
N3: (-28.314,-107.940,29.126)
OP1: (-22.812,-113.933,31.135)
OP2: (-24.591,-113.753,29.346)
C2: (-27.439,-107.749,30.151)
C1': (-25.584,-108.387,31.497)
C3': (-25.325,-110.209,32.931)
O5': (-24.026,-111.773,30.771)
O4': (-24.343,-108.987,31.228)
C5': (-23.255,-111.086,31.735)
P: (-23.514,-113.126,30.124)
C4': (-24.002,-109.902,32.289)
C2': (-26.050,-108.890,32.842)
O2': (-25.566,-108.005,33.834)
N1: (-26.520,-108.711,30.405)
O4: (-29.192,-109.065,27.424)
O2: (-27.475,-106.778,30.851)
C6: (-26.483,-109.815,29.610)
C5: (-27.350,-110.006,28.607)
O3': (-25.178,-110.658,34.244)
N3: (-28.314,-107.940,29.126)
OP1: (-22.812,-113.933,31.135)
OP2: (-24.591,-113.753,29.346)
C2: (-27.439,-107.749,30.151)
C1': (-25.584,-108.387,31.497)
C3': (-25.325,-110.209,32.931)
O5': (-24.026,-111.773,30.771)
O4': (-24.343,-108.987,31.228)
C5': (-23.255,-111.086,31.735)
P: (-23.514,-113.126,30.124)
C4': (-24.002,-109.902,32.289)
C2': (-26.050,-108.890,32.842)
O2': (-25.566,-108.005,33.834)
N1: (-26.520,-108.711,30.405)
O4: (-29.192,-109.065,27.424)
O2: (-27.475,-106.778,30.851)
C6: (-26.483,-109.815,29.610)
C5: (-27.350,-110.006,28.607)
O3': (-25.178,-110.658,34.244)
OP1: (-35.425,-111.224,25.300)
OP2: (-33.671,-111.366,27.116)
C3': (-34.461,-106.751,24.640)
C1': (-33.623,-105.728,26.652)
C5': (-35.827,-108.466,25.979)
O4': (-34.626,-106.649,27.015)
C8: (-31.643,-106.832,27.839)
O2': (-32.814,-104.900,24.516)
C6: (-30.559,-104.556,30.247)
C5: (-31.098,-105.362,29.241)
C4: (-32.168,-104.864,28.533)
P: (-34.947,-110.828,26.637)
C4': (-35.361,-107.042,25.840)
C2': (-33.213,-106.067,25.222)
C2: (-32.166,-103.021,29.661)
N1: (-31.139,-103.365,30.423)
N3: (-32.756,-103.690,28.703)
N6: (-29.525,-104.882,31.030)
N7: (-30.768,-106.617,28.790)
N9: (-32.527,-105.815,27.626)
O5': (-34.942,-109.247,26.754)
O3': (-35.123,-105.864,23.742)
OP2: (-33.671,-111.366,27.116)
C3': (-34.461,-106.751,24.640)
C1': (-33.623,-105.728,26.652)
C5': (-35.827,-108.466,25.979)
O4': (-34.626,-106.649,27.015)
C8: (-31.643,-106.832,27.839)
O2': (-32.814,-104.900,24.516)
C6: (-30.559,-104.556,30.247)
C5: (-31.098,-105.362,29.241)
C4: (-32.168,-104.864,28.533)
P: (-34.947,-110.828,26.637)
C4': (-35.361,-107.042,25.840)
C2': (-33.213,-106.067,25.222)
C2: (-32.166,-103.021,29.661)
N1: (-31.139,-103.365,30.423)
N3: (-32.756,-103.690,28.703)
N6: (-29.525,-104.882,31.030)
N7: (-30.768,-106.617,28.790)
N9: (-32.527,-105.815,27.626)
O5': (-34.942,-109.247,26.754)
O3': (-35.123,-105.864,23.742)
Image (generated by PyMOL):