Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0469:0473
Extra
PDB:
ATOM 1 O3' C A 468 29.612 147.389 54.640 1.00 51.99 O
ATOM 2 P U A 469 29.482 148.959 54.296 1.00 52.18 P
ATOM 3 OP1 U A 469 29.355 149.045 52.823 1.00 51.17 O
ATOM 4 OP2 U A 469 30.551 149.725 54.987 1.00 52.14 O
ATOM 5 O5' U A 469 28.096 149.395 54.943 1.00 49.24 O
ATOM 6 C5' U A 469 27.917 149.383 56.361 1.00 49.39 C
ATOM 7 C4' U A 469 26.908 150.429 56.769 1.00 51.94 C
ATOM 8 O4' U A 469 27.447 151.757 56.540 1.00 53.40 O
ATOM 9 C3' U A 469 25.610 150.423 55.984 1.00 52.13 C
ATOM 10 O3' U A 469 24.712 149.421 56.437 1.00 51.30 O
ATOM 11 C2' U A 469 25.098 151.838 56.201 1.00 52.91 C
ATOM 12 O2' U A 469 24.517 152.017 57.477 1.00 52.60 O
ATOM 13 C1' U A 469 26.403 152.634 56.142 1.00 52.85 C
ATOM 14 N1 U A 469 26.735 153.197 54.820 1.00 53.56 N
ATOM 15 C2 U A 469 25.972 154.258 54.351 1.00 54.43 C
ATOM 16 O2 U A 469 25.011 154.699 54.947 1.00 55.37 O
ATOM 17 N3 U A 469 26.381 154.786 53.154 1.00 54.06 N
ATOM 18 C4 U A 469 27.450 154.375 52.388 1.00 55.90 C
ATOM 19 O4 U A 469 27.799 155.061 51.422 1.00 57.41 O
ATOM 20 C5 U A 469 28.159 153.249 52.915 1.00 55.26 C
ATOM 21 C6 U A 469 27.785 152.712 54.079 1.00 53.69 C
ATOM 22 P G A 470 24.043 148.427 55.368 1.00 53.66 P
ATOM 23 OP1 G A 470 23.188 147.466 56.112 1.00 52.76 O
ATOM 24 OP2 G A 470 25.089 147.913 54.438 1.00 51.60 O
ATOM 25 O5' G A 470 23.106 149.394 54.529 1.00 53.15 O
TER
ATOM 1 O3' A B 472 22.882 156.499 45.361 1.00 52.60 O
ATOM 2 P A B 473 24.317 157.039 45.853 1.00 53.63 P
ATOM 3 OP1 A B 473 24.939 157.700 44.680 1.00 52.07 O
ATOM 4 OP2 A B 473 25.028 155.924 46.521 1.00 52.76 O
ATOM 5 O5' A B 473 23.974 158.168 46.930 1.00 52.93 O
ATOM 6 C5' A B 473 24.926 159.207 47.239 1.00 54.75 C
ATOM 7 C4' A B 473 24.336 160.209 48.212 1.00 56.80 C
ATOM 8 O4' A B 473 23.827 159.517 49.391 1.00 56.05 O
ATOM 9 C3' A B 473 25.345 161.238 48.736 1.00 58.56 C
ATOM 10 O3' A B 473 24.701 162.454 49.132 1.00 61.29 O
ATOM 11 C2' A B 473 25.788 160.590 50.042 1.00 58.70 C
ATOM 12 O2' A B 473 26.348 161.504 50.964 1.00 59.02 O
ATOM 13 C1' A B 473 24.445 160.061 50.537 1.00 56.54 C
ATOM 14 N9 A B 473 24.480 159.066 51.607 1.00 54.18 N
ATOM 15 C8 A B 473 25.225 157.921 51.725 1.00 53.32 C
ATOM 16 N7 A B 473 25.017 157.271 52.843 1.00 52.86 N
ATOM 17 C5 A B 473 24.065 158.038 53.502 1.00 52.64 C
ATOM 18 C6 A B 473 23.419 157.892 54.743 1.00 52.51 C
ATOM 19 N6 A B 473 23.646 156.883 55.580 1.00 52.30 N
ATOM 20 N1 A B 473 22.520 158.833 55.100 1.00 53.20 N
ATOM 21 C2 A B 473 22.297 159.852 54.266 1.00 53.37 C
ATOM 22 N3 A B 473 22.840 160.100 53.077 1.00 53.24 N
ATOM 23 C4 A B 473 23.725 159.143 52.750 1.00 53.21 C
ATOM 24 P A B 474 24.096 163.464 48.036 1.00 62.86 P
ATOM 25 OP1 A B 474 24.253 162.875 46.666 1.00 59.96 O
ATOM 26 OP2 A B 474 24.652 164.812 48.324 1.00 61.25 O
ATOM 27 O5' A B 474 22.553 163.510 48.434 1.00 59.05 O
TER
ATOM 2 P U A 469 29.482 148.959 54.296 1.00 52.18 P
ATOM 3 OP1 U A 469 29.355 149.045 52.823 1.00 51.17 O
ATOM 4 OP2 U A 469 30.551 149.725 54.987 1.00 52.14 O
ATOM 5 O5' U A 469 28.096 149.395 54.943 1.00 49.24 O
ATOM 6 C5' U A 469 27.917 149.383 56.361 1.00 49.39 C
ATOM 7 C4' U A 469 26.908 150.429 56.769 1.00 51.94 C
ATOM 8 O4' U A 469 27.447 151.757 56.540 1.00 53.40 O
ATOM 9 C3' U A 469 25.610 150.423 55.984 1.00 52.13 C
ATOM 10 O3' U A 469 24.712 149.421 56.437 1.00 51.30 O
ATOM 11 C2' U A 469 25.098 151.838 56.201 1.00 52.91 C
ATOM 12 O2' U A 469 24.517 152.017 57.477 1.00 52.60 O
ATOM 13 C1' U A 469 26.403 152.634 56.142 1.00 52.85 C
ATOM 14 N1 U A 469 26.735 153.197 54.820 1.00 53.56 N
ATOM 15 C2 U A 469 25.972 154.258 54.351 1.00 54.43 C
ATOM 16 O2 U A 469 25.011 154.699 54.947 1.00 55.37 O
ATOM 17 N3 U A 469 26.381 154.786 53.154 1.00 54.06 N
ATOM 18 C4 U A 469 27.450 154.375 52.388 1.00 55.90 C
ATOM 19 O4 U A 469 27.799 155.061 51.422 1.00 57.41 O
ATOM 20 C5 U A 469 28.159 153.249 52.915 1.00 55.26 C
ATOM 21 C6 U A 469 27.785 152.712 54.079 1.00 53.69 C
ATOM 22 P G A 470 24.043 148.427 55.368 1.00 53.66 P
ATOM 23 OP1 G A 470 23.188 147.466 56.112 1.00 52.76 O
ATOM 24 OP2 G A 470 25.089 147.913 54.438 1.00 51.60 O
ATOM 25 O5' G A 470 23.106 149.394 54.529 1.00 53.15 O
TER
ATOM 1 O3' A B 472 22.882 156.499 45.361 1.00 52.60 O
ATOM 2 P A B 473 24.317 157.039 45.853 1.00 53.63 P
ATOM 3 OP1 A B 473 24.939 157.700 44.680 1.00 52.07 O
ATOM 4 OP2 A B 473 25.028 155.924 46.521 1.00 52.76 O
ATOM 5 O5' A B 473 23.974 158.168 46.930 1.00 52.93 O
ATOM 6 C5' A B 473 24.926 159.207 47.239 1.00 54.75 C
ATOM 7 C4' A B 473 24.336 160.209 48.212 1.00 56.80 C
ATOM 8 O4' A B 473 23.827 159.517 49.391 1.00 56.05 O
ATOM 9 C3' A B 473 25.345 161.238 48.736 1.00 58.56 C
ATOM 10 O3' A B 473 24.701 162.454 49.132 1.00 61.29 O
ATOM 11 C2' A B 473 25.788 160.590 50.042 1.00 58.70 C
ATOM 12 O2' A B 473 26.348 161.504 50.964 1.00 59.02 O
ATOM 13 C1' A B 473 24.445 160.061 50.537 1.00 56.54 C
ATOM 14 N9 A B 473 24.480 159.066 51.607 1.00 54.18 N
ATOM 15 C8 A B 473 25.225 157.921 51.725 1.00 53.32 C
ATOM 16 N7 A B 473 25.017 157.271 52.843 1.00 52.86 N
ATOM 17 C5 A B 473 24.065 158.038 53.502 1.00 52.64 C
ATOM 18 C6 A B 473 23.419 157.892 54.743 1.00 52.51 C
ATOM 19 N6 A B 473 23.646 156.883 55.580 1.00 52.30 N
ATOM 20 N1 A B 473 22.520 158.833 55.100 1.00 53.20 N
ATOM 21 C2 A B 473 22.297 159.852 54.266 1.00 53.37 C
ATOM 22 N3 A B 473 22.840 160.100 53.077 1.00 53.24 N
ATOM 23 C4 A B 473 23.725 159.143 52.750 1.00 53.21 C
ATOM 24 P A B 474 24.096 163.464 48.036 1.00 62.86 P
ATOM 25 OP1 A B 474 24.253 162.875 46.666 1.00 59.96 O
ATOM 26 OP2 A B 474 24.652 164.812 48.324 1.00 61.25 O
ATOM 27 O5' A B 474 22.553 163.510 48.434 1.00 59.05 O
TER
Atoms:
C4: (27.450,154.375,52.388)
N3: (26.381,154.786,53.154)
OP1: (29.355,149.045,52.823)
OP2: (30.551,149.725,54.987)
C2: (25.972,154.258,54.351)
C1': (26.403,152.634,56.142)
C3': (25.610,150.423,55.984)
O5': (28.096,149.395,54.943)
O4': (27.447,151.757,56.540)
C5': (27.917,149.383,56.361)
P: (29.482,148.959,54.296)
C4': (26.908,150.429,56.769)
C2': (25.098,151.838,56.201)
O2': (24.517,152.017,57.477)
N1: (26.735,153.197,54.820)
O4: (27.799,155.061,51.422)
O2: (25.011,154.699,54.947)
C6: (27.785,152.712,54.079)
C5: (28.159,153.249,52.915)
O3': (24.712,149.421,56.437)
N3: (26.381,154.786,53.154)
OP1: (29.355,149.045,52.823)
OP2: (30.551,149.725,54.987)
C2: (25.972,154.258,54.351)
C1': (26.403,152.634,56.142)
C3': (25.610,150.423,55.984)
O5': (28.096,149.395,54.943)
O4': (27.447,151.757,56.540)
C5': (27.917,149.383,56.361)
P: (29.482,148.959,54.296)
C4': (26.908,150.429,56.769)
C2': (25.098,151.838,56.201)
O2': (24.517,152.017,57.477)
N1: (26.735,153.197,54.820)
O4: (27.799,155.061,51.422)
O2: (25.011,154.699,54.947)
C6: (27.785,152.712,54.079)
C5: (28.159,153.249,52.915)
O3': (24.712,149.421,56.437)
OP1: (24.939,157.700,44.680)
OP2: (25.028,155.924,46.521)
C3': (25.345,161.238,48.736)
C1': (24.445,160.061,50.537)
C5': (24.926,159.207,47.239)
O4': (23.827,159.517,49.391)
C8: (25.225,157.921,51.725)
O2': (26.348,161.504,50.964)
C6: (23.419,157.892,54.743)
C5: (24.065,158.038,53.502)
C4: (23.725,159.143,52.750)
P: (24.317,157.039,45.853)
C4': (24.336,160.209,48.212)
C2': (25.788,160.590,50.042)
C2: (22.297,159.852,54.266)
N1: (22.520,158.833,55.100)
N3: (22.840,160.100,53.077)
N6: (23.646,156.883,55.580)
N7: (25.017,157.271,52.843)
N9: (24.480,159.066,51.607)
O5': (23.974,158.168,46.930)
O3': (24.701,162.454,49.132)
OP2: (25.028,155.924,46.521)
C3': (25.345,161.238,48.736)
C1': (24.445,160.061,50.537)
C5': (24.926,159.207,47.239)
O4': (23.827,159.517,49.391)
C8: (25.225,157.921,51.725)
O2': (26.348,161.504,50.964)
C6: (23.419,157.892,54.743)
C5: (24.065,158.038,53.502)
C4: (23.725,159.143,52.750)
P: (24.317,157.039,45.853)
C4': (24.336,160.209,48.212)
C2': (25.788,160.590,50.042)
C2: (22.297,159.852,54.266)
N1: (22.520,158.833,55.100)
N3: (22.840,160.100,53.077)
N6: (23.646,156.883,55.580)
N7: (25.017,157.271,52.843)
N9: (24.480,159.066,51.607)
O5': (23.974,158.168,46.930)
O3': (24.701,162.454,49.132)
Image (generated by PyMOL):