ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:0453:0464

Extra

PDB:
ATOM 1 O3' G A 452 56.403 143.454 51.570 1.00 41.21 O
ATOM 2 P U A 453 57.463 144.539 52.118 1.00 44.55 P
ATOM 3 OP1 U A 453 58.306 145.003 50.980 1.00 41.00 O
ATOM 4 OP2 U A 453 58.115 143.988 53.342 1.00 39.56 O
ATOM 5 O5' U A 453 56.529 145.743 52.574 1.00 38.90 O
ATOM 6 C5' U A 453 55.856 146.569 51.609 1.00 37.22 C
ATOM 7 C4' U A 453 54.628 147.183 52.232 1.00 38.40 C
ATOM 8 O4' U A 453 53.609 146.166 52.359 1.00 39.71 O
ATOM 9 C3' U A 453 54.835 147.708 53.644 1.00 39.41 C
ATOM 10 O3' U A 453 55.347 149.038 53.644 1.00 39.99 O
ATOM 11 C2' U A 453 53.443 147.602 54.244 1.00 38.73 C
ATOM 12 O2' U A 453 52.615 148.665 53.840 1.00 38.15 O
ATOM 13 C1' U A 453 52.938 146.306 53.601 1.00 39.02 C
ATOM 14 N1 U A 453 53.175 145.079 54.385 1.00 37.91 N
ATOM 15 C2 U A 453 52.508 144.925 55.590 1.00 37.17 C
ATOM 16 O2 U A 453 51.758 145.765 56.048 1.00 39.60 O
ATOM 17 N3 U A 453 52.759 143.747 56.245 1.00 36.46 N
ATOM 18 C4 U A 453 53.598 142.730 55.837 1.00 38.90 C
ATOM 19 O4 U A 453 53.723 141.727 56.543 1.00 39.41 O
ATOM 20 C5 U A 453 54.261 142.966 54.592 1.00 38.64 C
ATOM 21 C6 U A 453 54.035 144.102 53.927 1.00 37.43 C
ATOM 22 P A A 454 56.544 149.433 54.640 1.00 38.34 P
ATOM 23 OP1 A A 454 56.872 150.845 54.359 1.00 43.10 O
ATOM 24 OP2 A A 454 57.613 148.406 54.551 1.00 38.45 O
ATOM 25 O5' A A 454 55.869 149.373 56.079 1.00 36.41 O
TER

ATOM 1 O3' G B 463 54.680 137.071 60.218 1.00 31.57 O
ATOM 2 P A B 464 53.645 136.544 59.106 1.00 31.80 P
ATOM 3 OP1 A B 464 52.681 135.705 59.856 1.00 31.80 O
ATOM 4 OP2 A B 464 54.338 135.976 57.923 1.00 28.67 O
ATOM 5 O5' A B 464 52.940 137.889 58.636 1.00 30.41 O
ATOM 6 C5' A B 464 51.579 138.161 58.964 1.00 29.68 C
ATOM 7 C4' A B 464 51.468 138.626 60.393 1.00 30.60 C
ATOM 8 O4' A B 464 52.351 139.755 60.631 1.00 31.50 O
ATOM 9 C3' A B 464 50.083 139.143 60.716 1.00 33.25 C
ATOM 10 O3' A B 464 49.227 138.066 61.056 1.00 33.99 O
ATOM 11 C2' A B 464 50.348 140.113 61.856 1.00 32.60 C
ATOM 12 O2' A B 464 50.514 139.431 63.080 1.00 34.74 O
ATOM 13 C1' A B 464 51.678 140.737 61.410 1.00 31.12 C
ATOM 14 N9 A B 464 51.519 141.935 60.576 1.00 29.90 N
ATOM 15 C8 A B 464 51.934 142.089 59.277 1.00 30.07 C
ATOM 16 N7 A B 464 51.661 143.266 58.769 1.00 29.10 N
ATOM 17 C5 A B 464 51.028 143.934 59.800 1.00 26.83 C
ATOM 18 C6 A B 464 50.507 145.223 59.891 1.00 29.05 C
ATOM 19 N6 A B 464 50.559 146.108 58.894 1.00 29.88 N
ATOM 20 N1 A B 464 49.927 145.587 61.053 1.00 28.88 N
ATOM 21 C2 A B 464 49.898 144.704 62.053 1.00 29.23 C
ATOM 22 N3 A B 464 50.370 143.460 62.092 1.00 31.17 N
ATOM 23 C4 A B 464 50.929 143.130 60.918 1.00 28.33 C
ATOM 24 P A B 465 47.817 137.907 60.313 1.00 34.53 P
ATOM 25 OP1 A B 465 47.263 136.598 60.710 1.00 34.91 O
ATOM 26 OP2 A B 465 47.976 138.231 58.870 1.00 33.87 O
ATOM 27 O5' A B 465 46.926 139.041 60.982 1.00 35.07 O
TER

Atoms:
C4: (53.598,142.730,55.837)
N3: (52.759,143.747,56.245)
OP1: (58.306,145.003,50.980)
OP2: (58.115,143.988,53.342)
C2: (52.508,144.925,55.590)
C1': (52.938,146.306,53.601)
C3': (54.835,147.708,53.644)
O5': (56.529,145.743,52.574)
O4': (53.609,146.166,52.359)
C5': (55.856,146.569,51.609)
P: (57.463,144.539,52.118)
C4': (54.628,147.183,52.232)
C2': (53.443,147.602,54.244)
O2': (52.615,148.665,53.840)
N1: (53.175,145.079,54.385)
O4: (53.723,141.727,56.543)
O2: (51.758,145.765,56.048)
C6: (54.035,144.102,53.927)
C5: (54.261,142.966,54.592)
O3': (55.347,149.038,53.644)
OP1: (52.681,135.705,59.856)
OP2: (54.338,135.976,57.923)
C3': (50.083,139.143,60.716)
C1': (51.678,140.737,61.410)
C5': (51.579,138.161,58.964)
O4': (52.351,139.755,60.631)
C8: (51.934,142.089,59.277)
O2': (50.514,139.431,63.080)
C6: (50.507,145.223,59.891)
C5: (51.028,143.934,59.800)
C4: (50.929,143.130,60.918)
P: (53.645,136.544,59.106)
C4': (51.468,138.626,60.393)
C2': (50.348,140.113,61.856)
C2: (49.898,144.704,62.053)
N1: (49.927,145.587,61.053)
N3: (50.370,143.460,62.092)
N6: (50.559,146.108,58.894)
N7: (51.661,143.266,58.769)
N9: (51.519,141.935,60.576)
O5': (52.940,137.889,58.636)
O3': (49.227,138.066,61.056)
Image (generated by PyMOL):
PyMOL image
show in jmol