Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1307:A1333
Extra
PDB:
ATOM 1 O3' C A1306 24.818 -27.588 -41.986 1.00 43.28 O
ATOM 2 P U A1307 25.766 -27.973 -43.232 1.00 45.07 P
ATOM 3 OP1 U A1307 25.966 -26.734 -44.015 1.00 47.43 O
ATOM 4 OP2 U A1307 25.192 -29.185 -43.909 1.00 42.89 O
ATOM 5 O5' U A1307 27.153 -28.356 -42.551 1.00 44.34 O
ATOM 6 C5' U A1307 28.187 -27.374 -42.370 1.00 50.81 C
ATOM 7 C4' U A1307 28.277 -26.958 -40.917 1.00 45.04 C
ATOM 8 O4' U A1307 27.268 -27.663 -40.158 1.00 38.04 O
ATOM 9 C3' U A1307 29.577 -27.286 -40.205 1.00 45.77 C
ATOM 10 O3' U A1307 30.543 -26.269 -40.368 1.00 51.32 O
ATOM 11 C2' U A1307 29.146 -27.342 -38.754 1.00 46.28 C
ATOM 12 O2' U A1307 29.028 -26.039 -38.226 1.00 46.69 O
ATOM 13 C1' U A1307 27.757 -27.961 -38.866 1.00 38.91 C
ATOM 14 N1 U A1307 27.786 -29.421 -38.691 1.00 40.68 N
ATOM 15 C2 U A1307 27.973 -29.918 -37.415 1.00 38.99 C
ATOM 16 O2 U A1307 28.056 -29.204 -36.434 1.00 42.91 O
ATOM 17 N3 U A1307 28.048 -31.281 -37.326 1.00 37.15 N
ATOM 18 C4 U A1307 27.929 -32.187 -38.357 1.00 45.07 C
ATOM 19 O4 U A1307 28.010 -33.397 -38.122 1.00 47.82 O
ATOM 20 C5 U A1307 27.706 -31.601 -39.638 1.00 43.36 C
ATOM 21 C6 U A1307 27.649 -30.271 -39.758 1.00 43.63 C
ATOM 22 P A A1308 32.087 -26.628 -40.171 1.00 51.98 P
ATOM 23 OP1 A A1308 32.905 -25.442 -40.525 1.00 48.71 O
ATOM 24 OP2 A A1308 32.280 -27.906 -40.887 1.00 36.89 O
ATOM 25 O5' A A1308 32.241 -26.926 -38.614 1.00 39.51 O
TER
ATOM 1 O3' G B1332 31.383 -38.329 -37.751 1.00 57.14 O
ATOM 2 P A B1333 30.067 -38.625 -36.894 1.00 51.77 P
ATOM 3 OP1 A B1333 30.080 -40.077 -36.604 1.00 59.92 O
ATOM 4 OP2 A B1333 28.909 -38.036 -37.608 1.00 59.56 O
ATOM 5 O5' A B1333 30.289 -37.785 -35.552 1.00 53.84 O
ATOM 6 C5' A B1333 30.675 -38.412 -34.311 1.00 62.02 C
ATOM 7 C4' A B1333 30.089 -37.646 -33.142 1.00 64.36 C
ATOM 8 O4' A B1333 30.415 -36.254 -33.352 1.00 61.21 O
ATOM 9 C3' A B1333 28.561 -37.670 -33.050 1.00 64.10 C
ATOM 10 O3' A B1333 27.935 -38.609 -32.136 1.00 69.32 O
ATOM 11 C2' A B1333 28.170 -36.254 -32.606 1.00 57.17 C
ATOM 12 O2' A B1333 27.571 -36.220 -31.336 1.00 60.55 O
ATOM 13 C1' A B1333 29.485 -35.468 -32.647 1.00 53.87 C
ATOM 14 N9 A B1333 29.412 -34.143 -33.284 1.00 50.36 N
ATOM 15 C8 A B1333 28.874 -33.819 -34.508 1.00 50.56 C
ATOM 16 N7 A B1333 28.994 -32.546 -34.822 1.00 46.68 N
ATOM 17 C5 A B1333 29.651 -31.996 -33.729 1.00 44.50 C
ATOM 18 C6 A B1333 30.085 -30.692 -33.455 1.00 43.46 C
ATOM 19 N6 A B1333 29.935 -29.677 -34.289 1.00 48.00 N
ATOM 20 N1 A B1333 30.696 -30.465 -32.276 1.00 48.66 N
ATOM 21 C2 A B1333 30.860 -31.485 -31.436 1.00 52.39 C
ATOM 22 N3 A B1333 30.506 -32.761 -31.583 1.00 50.63 N
ATOM 23 C4 A B1333 29.900 -32.956 -32.768 1.00 48.86 C
ATOM 24 P A B1334 28.767 -39.344 -30.949 1.00 81.50 P
ATOM 25 OP1 A B1334 30.199 -38.953 -30.879 1.00 83.48 O
ATOM 26 OP2 A B1334 28.406 -40.780 -30.943 1.00 76.00 O
ATOM 27 O5' A B1334 28.085 -38.812 -29.622 1.00 61.40 O
TER
ATOM 2 P U A1307 25.766 -27.973 -43.232 1.00 45.07 P
ATOM 3 OP1 U A1307 25.966 -26.734 -44.015 1.00 47.43 O
ATOM 4 OP2 U A1307 25.192 -29.185 -43.909 1.00 42.89 O
ATOM 5 O5' U A1307 27.153 -28.356 -42.551 1.00 44.34 O
ATOM 6 C5' U A1307 28.187 -27.374 -42.370 1.00 50.81 C
ATOM 7 C4' U A1307 28.277 -26.958 -40.917 1.00 45.04 C
ATOM 8 O4' U A1307 27.268 -27.663 -40.158 1.00 38.04 O
ATOM 9 C3' U A1307 29.577 -27.286 -40.205 1.00 45.77 C
ATOM 10 O3' U A1307 30.543 -26.269 -40.368 1.00 51.32 O
ATOM 11 C2' U A1307 29.146 -27.342 -38.754 1.00 46.28 C
ATOM 12 O2' U A1307 29.028 -26.039 -38.226 1.00 46.69 O
ATOM 13 C1' U A1307 27.757 -27.961 -38.866 1.00 38.91 C
ATOM 14 N1 U A1307 27.786 -29.421 -38.691 1.00 40.68 N
ATOM 15 C2 U A1307 27.973 -29.918 -37.415 1.00 38.99 C
ATOM 16 O2 U A1307 28.056 -29.204 -36.434 1.00 42.91 O
ATOM 17 N3 U A1307 28.048 -31.281 -37.326 1.00 37.15 N
ATOM 18 C4 U A1307 27.929 -32.187 -38.357 1.00 45.07 C
ATOM 19 O4 U A1307 28.010 -33.397 -38.122 1.00 47.82 O
ATOM 20 C5 U A1307 27.706 -31.601 -39.638 1.00 43.36 C
ATOM 21 C6 U A1307 27.649 -30.271 -39.758 1.00 43.63 C
ATOM 22 P A A1308 32.087 -26.628 -40.171 1.00 51.98 P
ATOM 23 OP1 A A1308 32.905 -25.442 -40.525 1.00 48.71 O
ATOM 24 OP2 A A1308 32.280 -27.906 -40.887 1.00 36.89 O
ATOM 25 O5' A A1308 32.241 -26.926 -38.614 1.00 39.51 O
TER
ATOM 1 O3' G B1332 31.383 -38.329 -37.751 1.00 57.14 O
ATOM 2 P A B1333 30.067 -38.625 -36.894 1.00 51.77 P
ATOM 3 OP1 A B1333 30.080 -40.077 -36.604 1.00 59.92 O
ATOM 4 OP2 A B1333 28.909 -38.036 -37.608 1.00 59.56 O
ATOM 5 O5' A B1333 30.289 -37.785 -35.552 1.00 53.84 O
ATOM 6 C5' A B1333 30.675 -38.412 -34.311 1.00 62.02 C
ATOM 7 C4' A B1333 30.089 -37.646 -33.142 1.00 64.36 C
ATOM 8 O4' A B1333 30.415 -36.254 -33.352 1.00 61.21 O
ATOM 9 C3' A B1333 28.561 -37.670 -33.050 1.00 64.10 C
ATOM 10 O3' A B1333 27.935 -38.609 -32.136 1.00 69.32 O
ATOM 11 C2' A B1333 28.170 -36.254 -32.606 1.00 57.17 C
ATOM 12 O2' A B1333 27.571 -36.220 -31.336 1.00 60.55 O
ATOM 13 C1' A B1333 29.485 -35.468 -32.647 1.00 53.87 C
ATOM 14 N9 A B1333 29.412 -34.143 -33.284 1.00 50.36 N
ATOM 15 C8 A B1333 28.874 -33.819 -34.508 1.00 50.56 C
ATOM 16 N7 A B1333 28.994 -32.546 -34.822 1.00 46.68 N
ATOM 17 C5 A B1333 29.651 -31.996 -33.729 1.00 44.50 C
ATOM 18 C6 A B1333 30.085 -30.692 -33.455 1.00 43.46 C
ATOM 19 N6 A B1333 29.935 -29.677 -34.289 1.00 48.00 N
ATOM 20 N1 A B1333 30.696 -30.465 -32.276 1.00 48.66 N
ATOM 21 C2 A B1333 30.860 -31.485 -31.436 1.00 52.39 C
ATOM 22 N3 A B1333 30.506 -32.761 -31.583 1.00 50.63 N
ATOM 23 C4 A B1333 29.900 -32.956 -32.768 1.00 48.86 C
ATOM 24 P A B1334 28.767 -39.344 -30.949 1.00 81.50 P
ATOM 25 OP1 A B1334 30.199 -38.953 -30.879 1.00 83.48 O
ATOM 26 OP2 A B1334 28.406 -40.780 -30.943 1.00 76.00 O
ATOM 27 O5' A B1334 28.085 -38.812 -29.622 1.00 61.40 O
TER
Atoms:
C4: (27.929,-32.187,-38.357)
N3: (28.048,-31.281,-37.326)
OP1: (25.966,-26.734,-44.015)
OP2: (25.192,-29.185,-43.909)
C2: (27.973,-29.918,-37.415)
C1': (27.757,-27.961,-38.866)
C3': (29.577,-27.286,-40.205)
O5': (27.153,-28.356,-42.551)
O4': (27.268,-27.663,-40.158)
C5': (28.187,-27.374,-42.370)
P: (25.766,-27.973,-43.232)
C4': (28.277,-26.958,-40.917)
C2': (29.146,-27.342,-38.754)
O2': (29.028,-26.039,-38.226)
N1: (27.786,-29.421,-38.691)
O4: (28.010,-33.397,-38.122)
O2: (28.056,-29.204,-36.434)
C6: (27.649,-30.271,-39.758)
C5: (27.706,-31.601,-39.638)
O3': (30.543,-26.269,-40.368)
N3: (28.048,-31.281,-37.326)
OP1: (25.966,-26.734,-44.015)
OP2: (25.192,-29.185,-43.909)
C2: (27.973,-29.918,-37.415)
C1': (27.757,-27.961,-38.866)
C3': (29.577,-27.286,-40.205)
O5': (27.153,-28.356,-42.551)
O4': (27.268,-27.663,-40.158)
C5': (28.187,-27.374,-42.370)
P: (25.766,-27.973,-43.232)
C4': (28.277,-26.958,-40.917)
C2': (29.146,-27.342,-38.754)
O2': (29.028,-26.039,-38.226)
N1: (27.786,-29.421,-38.691)
O4: (28.010,-33.397,-38.122)
O2: (28.056,-29.204,-36.434)
C6: (27.649,-30.271,-39.758)
C5: (27.706,-31.601,-39.638)
O3': (30.543,-26.269,-40.368)
OP1: (30.080,-40.077,-36.604)
OP2: (28.909,-38.036,-37.608)
C3': (28.561,-37.670,-33.050)
C1': (29.485,-35.468,-32.647)
C5': (30.675,-38.412,-34.311)
O4': (30.415,-36.254,-33.352)
C8: (28.874,-33.819,-34.508)
O2': (27.571,-36.220,-31.336)
C6: (30.085,-30.692,-33.455)
C5: (29.651,-31.996,-33.729)
C4: (29.900,-32.956,-32.768)
P: (30.067,-38.625,-36.894)
C4': (30.089,-37.646,-33.142)
C2': (28.170,-36.254,-32.606)
C2: (30.860,-31.485,-31.436)
N1: (30.696,-30.465,-32.276)
N3: (30.506,-32.761,-31.583)
N6: (29.935,-29.677,-34.289)
N7: (28.994,-32.546,-34.822)
N9: (29.412,-34.143,-33.284)
O5': (30.289,-37.785,-35.552)
O3': (27.935,-38.609,-32.136)
OP2: (28.909,-38.036,-37.608)
C3': (28.561,-37.670,-33.050)
C1': (29.485,-35.468,-32.647)
C5': (30.675,-38.412,-34.311)
O4': (30.415,-36.254,-33.352)
C8: (28.874,-33.819,-34.508)
O2': (27.571,-36.220,-31.336)
C6: (30.085,-30.692,-33.455)
C5: (29.651,-31.996,-33.729)
C4: (29.900,-32.956,-32.768)
P: (30.067,-38.625,-36.894)
C4': (30.089,-37.646,-33.142)
C2': (28.170,-36.254,-32.606)
C2: (30.860,-31.485,-31.436)
N1: (30.696,-30.465,-32.276)
N3: (30.506,-32.761,-31.583)
N6: (29.935,-29.677,-34.289)
N7: (28.994,-32.546,-34.822)
N9: (29.412,-34.143,-33.284)
O5': (30.289,-37.785,-35.552)
O3': (27.935,-38.609,-32.136)
Image (generated by PyMOL):