Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0U:A24:A61
Extra
PDB:
ATOM 1 O3' G A 23 -7.119 15.182 -1.658 1.00 45.46 O
ATOM 2 P U A 24 -8.438 15.780 -2.335 1.00 43.23 P
ATOM 3 OP1 U A 24 -9.576 15.424 -1.460 1.00 37.52 O
ATOM 4 OP2 U A 24 -8.414 15.422 -3.772 1.00 40.10 O
ATOM 5 O5' U A 24 -8.191 17.360 -2.246 1.00 44.96 O
ATOM 6 C5' U A 24 -8.206 18.022 -0.981 1.00 43.14 C
ATOM 7 C4' U A 24 -7.412 19.310 -1.073 1.00 44.81 C
ATOM 8 O4' U A 24 -6.013 19.023 -0.832 1.00 48.16 O
ATOM 9 C3' U A 24 -7.430 19.954 -2.449 1.00 46.88 C
ATOM 10 O3' U A 24 -8.547 20.825 -2.573 1.00 47.99 O
ATOM 11 C2' U A 24 -6.117 20.730 -2.451 1.00 47.09 C
ATOM 12 O2' U A 24 -6.209 21.929 -1.713 1.00 51.83 O
ATOM 13 C1' U A 24 -5.196 19.786 -1.699 1.00 44.40 C
ATOM 14 N1 U A 24 -4.454 18.876 -2.588 1.00 41.22 N
ATOM 15 C2 U A 24 -3.484 19.398 -3.413 1.00 43.51 C
ATOM 16 O2 U A 24 -3.207 20.577 -3.450 1.00 45.67 O
ATOM 17 N3 U A 24 -2.837 18.492 -4.206 1.00 41.97 N
ATOM 18 C4 U A 24 -3.072 17.137 -4.245 1.00 42.08 C
ATOM 19 O4 U A 24 -2.416 16.442 -5.007 1.00 44.57 O
ATOM 20 C5 U A 24 -4.099 16.664 -3.354 1.00 42.58 C
ATOM 21 C6 U A 24 -4.743 17.534 -2.572 1.00 41.96 C
ATOM 22 P A A 25 -9.225 21.018 -4.011 1.00 51.98 P
ATOM 23 OP1 A A 25 -10.433 21.843 -3.786 1.00 49.63 O
ATOM 24 OP2 A A 25 -9.347 19.687 -4.645 1.00 47.72 O
ATOM 25 O5' A A 25 -8.160 21.870 -4.856 1.00 45.90 O
TER
ATOM 1 O3' G B 60 0.062 13.344 -9.402 1.00 45.49 O
ATOM 2 P A B 61 0.963 13.037 -8.110 1.00 49.70 P
ATOM 3 OP1 A B 61 2.345 12.974 -8.638 1.00 45.55 O
ATOM 4 OP2 A B 61 0.397 11.910 -7.335 1.00 43.97 O
ATOM 5 O5' A B 61 0.776 14.338 -7.182 1.00 49.02 O
ATOM 6 C5' A B 61 1.815 15.299 -6.934 1.00 46.37 C
ATOM 7 C4' A B 61 2.111 16.192 -8.129 1.00 46.25 C
ATOM 8 O4' A B 61 0.900 16.849 -8.566 1.00 48.15 O
ATOM 9 C3' A B 61 3.075 17.334 -7.844 1.00 47.64 C
ATOM 10 O3' A B 61 4.397 16.894 -8.096 1.00 49.30 O
ATOM 11 C2' A B 61 2.634 18.406 -8.838 1.00 44.74 C
ATOM 12 O2' A B 61 3.089 18.154 -10.154 1.00 44.93 O
ATOM 13 C1' A B 61 1.128 18.227 -8.778 1.00 43.12 C
ATOM 14 N9 A B 61 0.456 18.945 -7.702 1.00 43.05 N
ATOM 15 C8 A B 61 -0.292 18.412 -6.687 1.00 41.67 C
ATOM 16 N7 A B 61 -0.792 19.310 -5.873 1.00 40.21 N
ATOM 17 C5 A B 61 -0.338 20.509 -6.394 1.00 40.24 C
ATOM 18 C6 A B 61 -0.512 21.845 -5.996 1.00 41.30 C
ATOM 19 N6 A B 61 -1.226 22.207 -4.924 1.00 42.77 N
ATOM 20 N1 A B 61 0.077 22.802 -6.740 1.00 39.40 N
ATOM 21 C2 A B 61 0.788 22.445 -7.812 1.00 38.80 C
ATOM 22 N3 A B 61 1.024 21.227 -8.285 1.00 41.04 N
ATOM 23 C4 A B 61 0.428 20.302 -7.521 1.00 41.46 C
ATOM 24 P A B 62 5.502 17.075 -6.960 1.00 49.57 P
ATOM 25 OP1 A B 62 6.726 16.446 -7.505 1.00 48.94 O
ATOM 26 OP2 A B 62 4.942 16.659 -5.651 1.00 44.86 O
ATOM 27 O5' A B 62 5.702 18.662 -6.921 1.00 47.68 O
TER
ATOM 2 P U A 24 -8.438 15.780 -2.335 1.00 43.23 P
ATOM 3 OP1 U A 24 -9.576 15.424 -1.460 1.00 37.52 O
ATOM 4 OP2 U A 24 -8.414 15.422 -3.772 1.00 40.10 O
ATOM 5 O5' U A 24 -8.191 17.360 -2.246 1.00 44.96 O
ATOM 6 C5' U A 24 -8.206 18.022 -0.981 1.00 43.14 C
ATOM 7 C4' U A 24 -7.412 19.310 -1.073 1.00 44.81 C
ATOM 8 O4' U A 24 -6.013 19.023 -0.832 1.00 48.16 O
ATOM 9 C3' U A 24 -7.430 19.954 -2.449 1.00 46.88 C
ATOM 10 O3' U A 24 -8.547 20.825 -2.573 1.00 47.99 O
ATOM 11 C2' U A 24 -6.117 20.730 -2.451 1.00 47.09 C
ATOM 12 O2' U A 24 -6.209 21.929 -1.713 1.00 51.83 O
ATOM 13 C1' U A 24 -5.196 19.786 -1.699 1.00 44.40 C
ATOM 14 N1 U A 24 -4.454 18.876 -2.588 1.00 41.22 N
ATOM 15 C2 U A 24 -3.484 19.398 -3.413 1.00 43.51 C
ATOM 16 O2 U A 24 -3.207 20.577 -3.450 1.00 45.67 O
ATOM 17 N3 U A 24 -2.837 18.492 -4.206 1.00 41.97 N
ATOM 18 C4 U A 24 -3.072 17.137 -4.245 1.00 42.08 C
ATOM 19 O4 U A 24 -2.416 16.442 -5.007 1.00 44.57 O
ATOM 20 C5 U A 24 -4.099 16.664 -3.354 1.00 42.58 C
ATOM 21 C6 U A 24 -4.743 17.534 -2.572 1.00 41.96 C
ATOM 22 P A A 25 -9.225 21.018 -4.011 1.00 51.98 P
ATOM 23 OP1 A A 25 -10.433 21.843 -3.786 1.00 49.63 O
ATOM 24 OP2 A A 25 -9.347 19.687 -4.645 1.00 47.72 O
ATOM 25 O5' A A 25 -8.160 21.870 -4.856 1.00 45.90 O
TER
ATOM 1 O3' G B 60 0.062 13.344 -9.402 1.00 45.49 O
ATOM 2 P A B 61 0.963 13.037 -8.110 1.00 49.70 P
ATOM 3 OP1 A B 61 2.345 12.974 -8.638 1.00 45.55 O
ATOM 4 OP2 A B 61 0.397 11.910 -7.335 1.00 43.97 O
ATOM 5 O5' A B 61 0.776 14.338 -7.182 1.00 49.02 O
ATOM 6 C5' A B 61 1.815 15.299 -6.934 1.00 46.37 C
ATOM 7 C4' A B 61 2.111 16.192 -8.129 1.00 46.25 C
ATOM 8 O4' A B 61 0.900 16.849 -8.566 1.00 48.15 O
ATOM 9 C3' A B 61 3.075 17.334 -7.844 1.00 47.64 C
ATOM 10 O3' A B 61 4.397 16.894 -8.096 1.00 49.30 O
ATOM 11 C2' A B 61 2.634 18.406 -8.838 1.00 44.74 C
ATOM 12 O2' A B 61 3.089 18.154 -10.154 1.00 44.93 O
ATOM 13 C1' A B 61 1.128 18.227 -8.778 1.00 43.12 C
ATOM 14 N9 A B 61 0.456 18.945 -7.702 1.00 43.05 N
ATOM 15 C8 A B 61 -0.292 18.412 -6.687 1.00 41.67 C
ATOM 16 N7 A B 61 -0.792 19.310 -5.873 1.00 40.21 N
ATOM 17 C5 A B 61 -0.338 20.509 -6.394 1.00 40.24 C
ATOM 18 C6 A B 61 -0.512 21.845 -5.996 1.00 41.30 C
ATOM 19 N6 A B 61 -1.226 22.207 -4.924 1.00 42.77 N
ATOM 20 N1 A B 61 0.077 22.802 -6.740 1.00 39.40 N
ATOM 21 C2 A B 61 0.788 22.445 -7.812 1.00 38.80 C
ATOM 22 N3 A B 61 1.024 21.227 -8.285 1.00 41.04 N
ATOM 23 C4 A B 61 0.428 20.302 -7.521 1.00 41.46 C
ATOM 24 P A B 62 5.502 17.075 -6.960 1.00 49.57 P
ATOM 25 OP1 A B 62 6.726 16.446 -7.505 1.00 48.94 O
ATOM 26 OP2 A B 62 4.942 16.659 -5.651 1.00 44.86 O
ATOM 27 O5' A B 62 5.702 18.662 -6.921 1.00 47.68 O
TER
Atoms:
C4: (-3.072,17.137,-4.245)
N3: (-2.837,18.492,-4.206)
OP1: (-9.576,15.424,-1.460)
OP2: (-8.414,15.422,-3.772)
C2: (-3.484,19.398,-3.413)
C1': (-5.196,19.786,-1.699)
C3': (-7.430,19.954,-2.449)
O5': (-8.191,17.360,-2.246)
O4': (-6.013,19.023,-0.832)
C5': (-8.206,18.022,-0.981)
P: (-8.438,15.780,-2.335)
C4': (-7.412,19.310,-1.073)
C2': (-6.117,20.730,-2.451)
O2': (-6.209,21.929,-1.713)
N1: (-4.454,18.876,-2.588)
O4: (-2.416,16.442,-5.007)
O2: (-3.207,20.577,-3.450)
C6: (-4.743,17.534,-2.572)
C5: (-4.099,16.664,-3.354)
O3': (-8.547,20.825,-2.573)
N3: (-2.837,18.492,-4.206)
OP1: (-9.576,15.424,-1.460)
OP2: (-8.414,15.422,-3.772)
C2: (-3.484,19.398,-3.413)
C1': (-5.196,19.786,-1.699)
C3': (-7.430,19.954,-2.449)
O5': (-8.191,17.360,-2.246)
O4': (-6.013,19.023,-0.832)
C5': (-8.206,18.022,-0.981)
P: (-8.438,15.780,-2.335)
C4': (-7.412,19.310,-1.073)
C2': (-6.117,20.730,-2.451)
O2': (-6.209,21.929,-1.713)
N1: (-4.454,18.876,-2.588)
O4: (-2.416,16.442,-5.007)
O2: (-3.207,20.577,-3.450)
C6: (-4.743,17.534,-2.572)
C5: (-4.099,16.664,-3.354)
O3': (-8.547,20.825,-2.573)
OP1: (2.345,12.974,-8.638)
OP2: (0.397,11.910,-7.335)
C3': (3.075,17.334,-7.844)
C1': (1.128,18.227,-8.778)
C5': (1.815,15.299,-6.934)
O4': (0.900,16.849,-8.566)
C8: (-0.292,18.412,-6.687)
O2': (3.089,18.154,-10.154)
C6: (-0.512,21.845,-5.996)
C5: (-0.338,20.509,-6.394)
C4: (0.428,20.302,-7.521)
P: (0.963,13.037,-8.110)
C4': (2.111,16.192,-8.129)
C2': (2.634,18.406,-8.838)
C2: (0.788,22.445,-7.812)
N1: (0.077,22.802,-6.740)
N3: (1.024,21.227,-8.285)
N6: (-1.226,22.207,-4.924)
N7: (-0.792,19.310,-5.873)
N9: (0.456,18.945,-7.702)
O5': (0.776,14.338,-7.182)
O3': (4.397,16.894,-8.096)
OP2: (0.397,11.910,-7.335)
C3': (3.075,17.334,-7.844)
C1': (1.128,18.227,-8.778)
C5': (1.815,15.299,-6.934)
O4': (0.900,16.849,-8.566)
C8: (-0.292,18.412,-6.687)
O2': (3.089,18.154,-10.154)
C6: (-0.512,21.845,-5.996)
C5: (-0.338,20.509,-6.394)
C4: (0.428,20.302,-7.521)
P: (0.963,13.037,-8.110)
C4': (2.111,16.192,-8.129)
C2': (2.634,18.406,-8.838)
C2: (0.788,22.445,-7.812)
N1: (0.077,22.802,-6.740)
N3: (1.024,21.227,-8.285)
N6: (-1.226,22.207,-4.924)
N7: (-0.792,19.310,-5.873)
N9: (0.456,18.945,-7.702)
O5': (0.776,14.338,-7.182)
O3': (4.397,16.894,-8.096)
Image (generated by PyMOL):