Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1909:A1904
Extra
PDB:
ATOM 1 O3' A A1908 -58.643 103.167 113.875 1.00 40.79 O
ATOM 2 P U A1909 -59.362 104.553 113.563 1.00 18.47 P
ATOM 3 OP1 U A1909 -59.681 105.177 114.864 1.00 18.47 O
ATOM 4 OP2 U A1909 -60.476 104.252 112.608 1.00 18.47 O
ATOM 5 O5' U A1909 -58.219 105.381 112.820 1.00 18.47 O
ATOM 6 C5' U A1909 -56.958 105.559 113.430 1.00 18.47 C
ATOM 7 C4' U A1909 -55.843 105.202 112.504 1.00 18.47 C
ATOM 8 O4' U A1909 -56.155 103.974 111.813 1.00 18.47 O
ATOM 9 C3' U A1909 -55.570 106.188 111.391 1.00 18.47 C
ATOM 10 O3' U A1909 -54.811 107.294 111.827 1.00 18.47 O
ATOM 11 C2' U A1909 -54.859 105.328 110.359 1.00 18.47 C
ATOM 12 O2' U A1909 -53.498 105.132 110.711 1.00 18.47 O
ATOM 13 C1' U A1909 -55.595 104.000 110.517 1.00 18.47 C
ATOM 14 N1 U A1909 -56.680 103.850 109.529 1.00 18.57 N
ATOM 15 C2 U A1909 -56.296 103.875 108.216 1.00 18.57 C
ATOM 16 O2 U A1909 -55.141 104.009 107.861 1.00 18.57 O
ATOM 17 N3 U A1909 -57.329 103.735 107.336 1.00 18.57 N
ATOM 18 C4 U A1909 -58.667 103.579 107.612 1.00 18.57 C
ATOM 19 O4 U A1909 -59.448 103.474 106.668 1.00 18.57 O
ATOM 20 C5 U A1909 -59.000 103.565 108.999 1.00 18.57 C
ATOM 21 C6 U A1909 -58.008 103.699 109.888 1.00 18.57 C
ATOM 22 P A A1910 -55.215 108.775 111.370 1.00 15.03 P
ATOM 23 OP1 A A1910 -54.284 109.710 112.047 1.00 15.03 O
ATOM 24 OP2 A A1910 -56.683 108.926 111.598 1.00 15.03 O
ATOM 25 O5' A A1910 -54.889 108.735 109.817 1.00 15.03 O
TER
ATOM 1 O3' U B1903 -63.255 107.022 102.172 1.00 11.08 O
ATOM 2 P A B1904 -63.221 105.563 102.838 1.00 13.79 P
ATOM 3 OP1 A B1904 -64.413 104.821 102.339 1.00 13.79 O
ATOM 4 OP2 A B1904 -63.054 105.748 104.313 1.00 13.79 O
ATOM 5 O5' A B1904 -61.907 104.937 102.218 1.00 13.79 O
ATOM 6 C5' A B1904 -61.862 104.600 100.850 1.00 13.79 C
ATOM 7 C4' A B1904 -60.644 103.778 100.516 1.00 13.79 C
ATOM 8 O4' A B1904 -59.450 104.454 100.949 1.00 13.79 O
ATOM 9 C3' A B1904 -60.562 102.416 101.169 1.00 13.79 C
ATOM 10 O3' A B1904 -61.323 101.452 100.470 1.00 13.79 O
ATOM 11 C2' A B1904 -59.055 102.115 101.206 1.00 13.79 C
ATOM 12 O2' A B1904 -58.648 101.347 100.080 1.00 13.79 O
ATOM 13 C1' A B1904 -58.422 103.513 101.114 1.00 13.79 C
ATOM 14 N9 A B1904 -57.661 103.864 102.306 1.00 13.81 N
ATOM 15 C8 A B1904 -58.142 104.009 103.572 1.00 13.81 C
ATOM 16 N7 A B1904 -57.203 104.340 104.411 1.00 13.81 N
ATOM 17 C5 A B1904 -56.060 104.415 103.630 1.00 13.81 C
ATOM 18 C6 A B1904 -54.754 104.712 103.951 1.00 13.81 C
ATOM 19 N6 A B1904 -54.373 105.006 105.195 1.00 13.81 N
ATOM 20 N1 A B1904 -53.870 104.697 102.949 1.00 13.81 N
ATOM 21 C2 A B1904 -54.278 104.407 101.719 1.00 13.81 C
ATOM 22 N3 A B1904 -55.486 104.108 101.307 1.00 13.81 N
ATOM 23 C4 A B1904 -56.327 104.131 102.328 1.00 13.81 C
ATOM 24 P A B1905 -62.512 100.696 101.214 1.00 52.95 P
ATOM 25 OP1 A B1905 -63.758 101.046 100.505 1.00 52.95 O
ATOM 26 OP2 A B1905 -62.403 101.007 102.658 1.00 52.95 O
ATOM 27 O5' A B1905 -62.147 99.179 100.967 1.00 52.95 O
TER
ATOM 2 P U A1909 -59.362 104.553 113.563 1.00 18.47 P
ATOM 3 OP1 U A1909 -59.681 105.177 114.864 1.00 18.47 O
ATOM 4 OP2 U A1909 -60.476 104.252 112.608 1.00 18.47 O
ATOM 5 O5' U A1909 -58.219 105.381 112.820 1.00 18.47 O
ATOM 6 C5' U A1909 -56.958 105.559 113.430 1.00 18.47 C
ATOM 7 C4' U A1909 -55.843 105.202 112.504 1.00 18.47 C
ATOM 8 O4' U A1909 -56.155 103.974 111.813 1.00 18.47 O
ATOM 9 C3' U A1909 -55.570 106.188 111.391 1.00 18.47 C
ATOM 10 O3' U A1909 -54.811 107.294 111.827 1.00 18.47 O
ATOM 11 C2' U A1909 -54.859 105.328 110.359 1.00 18.47 C
ATOM 12 O2' U A1909 -53.498 105.132 110.711 1.00 18.47 O
ATOM 13 C1' U A1909 -55.595 104.000 110.517 1.00 18.47 C
ATOM 14 N1 U A1909 -56.680 103.850 109.529 1.00 18.57 N
ATOM 15 C2 U A1909 -56.296 103.875 108.216 1.00 18.57 C
ATOM 16 O2 U A1909 -55.141 104.009 107.861 1.00 18.57 O
ATOM 17 N3 U A1909 -57.329 103.735 107.336 1.00 18.57 N
ATOM 18 C4 U A1909 -58.667 103.579 107.612 1.00 18.57 C
ATOM 19 O4 U A1909 -59.448 103.474 106.668 1.00 18.57 O
ATOM 20 C5 U A1909 -59.000 103.565 108.999 1.00 18.57 C
ATOM 21 C6 U A1909 -58.008 103.699 109.888 1.00 18.57 C
ATOM 22 P A A1910 -55.215 108.775 111.370 1.00 15.03 P
ATOM 23 OP1 A A1910 -54.284 109.710 112.047 1.00 15.03 O
ATOM 24 OP2 A A1910 -56.683 108.926 111.598 1.00 15.03 O
ATOM 25 O5' A A1910 -54.889 108.735 109.817 1.00 15.03 O
TER
ATOM 1 O3' U B1903 -63.255 107.022 102.172 1.00 11.08 O
ATOM 2 P A B1904 -63.221 105.563 102.838 1.00 13.79 P
ATOM 3 OP1 A B1904 -64.413 104.821 102.339 1.00 13.79 O
ATOM 4 OP2 A B1904 -63.054 105.748 104.313 1.00 13.79 O
ATOM 5 O5' A B1904 -61.907 104.937 102.218 1.00 13.79 O
ATOM 6 C5' A B1904 -61.862 104.600 100.850 1.00 13.79 C
ATOM 7 C4' A B1904 -60.644 103.778 100.516 1.00 13.79 C
ATOM 8 O4' A B1904 -59.450 104.454 100.949 1.00 13.79 O
ATOM 9 C3' A B1904 -60.562 102.416 101.169 1.00 13.79 C
ATOM 10 O3' A B1904 -61.323 101.452 100.470 1.00 13.79 O
ATOM 11 C2' A B1904 -59.055 102.115 101.206 1.00 13.79 C
ATOM 12 O2' A B1904 -58.648 101.347 100.080 1.00 13.79 O
ATOM 13 C1' A B1904 -58.422 103.513 101.114 1.00 13.79 C
ATOM 14 N9 A B1904 -57.661 103.864 102.306 1.00 13.81 N
ATOM 15 C8 A B1904 -58.142 104.009 103.572 1.00 13.81 C
ATOM 16 N7 A B1904 -57.203 104.340 104.411 1.00 13.81 N
ATOM 17 C5 A B1904 -56.060 104.415 103.630 1.00 13.81 C
ATOM 18 C6 A B1904 -54.754 104.712 103.951 1.00 13.81 C
ATOM 19 N6 A B1904 -54.373 105.006 105.195 1.00 13.81 N
ATOM 20 N1 A B1904 -53.870 104.697 102.949 1.00 13.81 N
ATOM 21 C2 A B1904 -54.278 104.407 101.719 1.00 13.81 C
ATOM 22 N3 A B1904 -55.486 104.108 101.307 1.00 13.81 N
ATOM 23 C4 A B1904 -56.327 104.131 102.328 1.00 13.81 C
ATOM 24 P A B1905 -62.512 100.696 101.214 1.00 52.95 P
ATOM 25 OP1 A B1905 -63.758 101.046 100.505 1.00 52.95 O
ATOM 26 OP2 A B1905 -62.403 101.007 102.658 1.00 52.95 O
ATOM 27 O5' A B1905 -62.147 99.179 100.967 1.00 52.95 O
TER
Atoms:
C4: (-58.667,103.579,107.612)
N3: (-57.329,103.735,107.336)
OP1: (-59.681,105.177,114.864)
OP2: (-60.476,104.252,112.608)
C2: (-56.296,103.875,108.216)
C1': (-55.595,104.000,110.517)
C3': (-55.570,106.188,111.391)
O5': (-58.219,105.381,112.820)
O4': (-56.155,103.974,111.813)
C5': (-56.958,105.559,113.430)
P: (-59.362,104.553,113.563)
C4': (-55.843,105.202,112.504)
C2': (-54.859,105.328,110.359)
O2': (-53.498,105.132,110.711)
N1: (-56.680,103.850,109.529)
O4: (-59.448,103.474,106.668)
O2: (-55.141,104.009,107.861)
C6: (-58.008,103.699,109.888)
C5: (-59.000,103.565,108.999)
O3': (-54.811,107.294,111.827)
N3: (-57.329,103.735,107.336)
OP1: (-59.681,105.177,114.864)
OP2: (-60.476,104.252,112.608)
C2: (-56.296,103.875,108.216)
C1': (-55.595,104.000,110.517)
C3': (-55.570,106.188,111.391)
O5': (-58.219,105.381,112.820)
O4': (-56.155,103.974,111.813)
C5': (-56.958,105.559,113.430)
P: (-59.362,104.553,113.563)
C4': (-55.843,105.202,112.504)
C2': (-54.859,105.328,110.359)
O2': (-53.498,105.132,110.711)
N1: (-56.680,103.850,109.529)
O4: (-59.448,103.474,106.668)
O2: (-55.141,104.009,107.861)
C6: (-58.008,103.699,109.888)
C5: (-59.000,103.565,108.999)
O3': (-54.811,107.294,111.827)
OP1: (-64.413,104.821,102.339)
OP2: (-63.054,105.748,104.313)
C3': (-60.562,102.416,101.169)
C1': (-58.422,103.513,101.114)
C5': (-61.862,104.600,100.850)
O4': (-59.450,104.454,100.949)
C8: (-58.142,104.009,103.572)
O2': (-58.648,101.347,100.080)
C6: (-54.754,104.712,103.951)
C5: (-56.060,104.415,103.630)
C4: (-56.327,104.131,102.328)
P: (-63.221,105.563,102.838)
C4': (-60.644,103.778,100.516)
C2': (-59.055,102.115,101.206)
C2: (-54.278,104.407,101.719)
N1: (-53.870,104.697,102.949)
N3: (-55.486,104.108,101.307)
N6: (-54.373,105.006,105.195)
N7: (-57.203,104.340,104.411)
N9: (-57.661,103.864,102.306)
O5': (-61.907,104.937,102.218)
O3': (-61.323,101.452,100.470)
OP2: (-63.054,105.748,104.313)
C3': (-60.562,102.416,101.169)
C1': (-58.422,103.513,101.114)
C5': (-61.862,104.600,100.850)
O4': (-59.450,104.454,100.949)
C8: (-58.142,104.009,103.572)
O2': (-58.648,101.347,100.080)
C6: (-54.754,104.712,103.951)
C5: (-56.060,104.415,103.630)
C4: (-56.327,104.131,102.328)
P: (-63.221,105.563,102.838)
C4': (-60.644,103.778,100.516)
C2': (-59.055,102.115,101.206)
C2: (-54.278,104.407,101.719)
N1: (-53.870,104.697,102.949)
N3: (-55.486,104.108,101.307)
N6: (-54.373,105.006,105.195)
N7: (-57.203,104.340,104.411)
N9: (-57.661,103.864,102.306)
O5': (-61.907,104.937,102.218)
O3': (-61.323,101.452,100.470)
Image (generated by PyMOL):