ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:02015:02020

Extra

PDB:
ATOM 1 O3' G A2014 43.797 110.581 115.378 1.00 38.40 O
ATOM 2 P U A2015 44.739 109.910 114.263 1.00 37.76 P
ATOM 3 OP1 U A2015 45.096 108.560 114.751 1.00 39.86 O
ATOM 4 OP2 U A2015 45.819 110.872 113.908 1.00 37.50 O
ATOM 5 O5' U A2015 43.808 109.773 112.976 1.00 38.41 O
ATOM 6 C5' U A2015 42.537 109.083 113.020 1.00 35.85 C
ATOM 7 C4' U A2015 41.747 109.373 111.756 1.00 35.25 C
ATOM 8 O4' U A2015 41.439 110.792 111.690 1.00 33.50 O
ATOM 9 C3' U A2015 42.486 109.096 110.455 1.00 34.17 C
ATOM 10 O3' U A2015 42.377 107.734 110.080 1.00 34.72 O
ATOM 11 C2' U A2015 41.774 110.010 109.470 1.00 33.81 C
ATOM 12 O2' U A2015 40.540 109.491 109.050 1.00 34.92 O
ATOM 13 C1' U A2015 41.504 111.234 110.341 1.00 35.08 C
ATOM 14 N1 U A2015 42.534 112.281 110.228 1.00 35.96 N
ATOM 15 C2 U A2015 42.480 113.150 109.134 1.00 35.71 C
ATOM 16 O2 U A2015 41.646 113.064 108.246 1.00 36.51 O
ATOM 17 N3 U A2015 43.445 114.122 109.122 1.00 35.07 N
ATOM 18 C4 U A2015 44.436 114.320 110.056 1.00 35.02 C
ATOM 19 O4 U A2015 45.218 115.255 109.914 1.00 36.63 O
ATOM 20 C5 U A2015 44.443 113.379 111.133 1.00 35.65 C
ATOM 21 C6 U A2015 43.520 112.416 111.181 1.00 36.59 C
ATOM 22 P G A2016 43.585 107.012 109.309 1.00 34.66 P
ATOM 23 OP1 G A2016 43.178 105.600 109.101 1.00 35.34 O
ATOM 24 OP2 G A2016 44.858 107.305 110.018 1.00 37.65 O
ATOM 25 O5' G A2016 43.616 107.733 107.881 1.00 36.95 O
TER

ATOM 1 O3' G B2019 49.993 117.744 105.704 1.00 38.14 O
ATOM 2 P A B2020 48.451 117.621 105.298 1.00 38.37 P
ATOM 3 OP1 A B2020 47.742 117.136 106.510 1.00 38.78 O
ATOM 4 OP2 A B2020 48.338 116.864 104.024 1.00 37.68 O
ATOM 5 O5' A B2020 47.996 119.114 105.013 1.00 38.58 O
ATOM 6 C5' A B2020 47.469 119.926 106.055 1.00 34.62 C
ATOM 7 C4' A B2020 46.142 120.489 105.633 1.00 37.27 C
ATOM 8 O4' A B2020 45.228 119.407 105.287 1.00 37.48 O
ATOM 9 C3' A B2020 45.439 121.301 106.706 1.00 37.14 C
ATOM 10 O3' A B2020 44.636 122.270 106.047 1.00 43.31 O
ATOM 11 C2' A B2020 44.531 120.261 107.349 1.00 35.21 C
ATOM 12 O2' A B2020 43.429 120.850 107.995 1.00 35.72 O
ATOM 13 C1' A B2020 44.082 119.486 106.111 1.00 36.10 C
ATOM 14 N9 A B2020 43.552 118.138 106.323 1.00 33.88 N
ATOM 15 C8 A B2020 43.903 117.188 107.246 1.00 31.13 C
ATOM 16 N7 A B2020 43.233 116.070 107.131 1.00 31.45 N
ATOM 17 C5 A B2020 42.374 116.301 106.064 1.00 31.96 C
ATOM 18 C6 A B2020 41.391 115.499 105.425 1.00 31.13 C
ATOM 19 N6 A B2020 41.080 114.251 105.796 1.00 24.97 N
ATOM 20 N1 A B2020 40.725 116.040 104.382 1.00 31.01 N
ATOM 21 C2 A B2020 41.014 117.286 104.016 1.00 32.50 C
ATOM 22 N3 A B2020 41.901 118.135 104.535 1.00 33.86 N
ATOM 23 C4 A B2020 42.556 117.572 105.564 1.00 32.96 C
ATOM 24 P G B2021 45.239 123.718 105.705 1.00 45.22 P
ATOM 25 OP1 G B2021 45.498 123.750 104.241 1.00 45.30 O
ATOM 26 OP2 G B2021 46.336 124.030 106.655 1.00 44.59 O
ATOM 27 O5' G B2021 44.024 124.688 106.035 1.00 41.76 O
TER

Atoms:
C4: (44.436,114.320,110.056)
N3: (43.445,114.122,109.122)
OP1: (45.096,108.560,114.751)
OP2: (45.819,110.872,113.908)
C2: (42.480,113.150,109.134)
C1': (41.504,111.234,110.341)
C3': (42.486,109.096,110.455)
O5': (43.808,109.773,112.976)
O4': (41.439,110.792,111.690)
C5': (42.537,109.083,113.020)
P: (44.739,109.910,114.263)
C4': (41.747,109.373,111.756)
C2': (41.774,110.010,109.470)
O2': (40.540,109.491,109.050)
N1: (42.534,112.281,110.228)
O4: (45.218,115.255,109.914)
O2: (41.646,113.064,108.246)
C6: (43.520,112.416,111.181)
C5: (44.443,113.379,111.133)
O3': (42.377,107.734,110.080)
OP1: (47.742,117.136,106.510)
OP2: (48.338,116.864,104.024)
C3': (45.439,121.301,106.706)
C1': (44.082,119.486,106.111)
C5': (47.469,119.926,106.055)
O4': (45.228,119.407,105.287)
C8: (43.903,117.188,107.246)
O2': (43.429,120.850,107.995)
C6: (41.391,115.499,105.425)
C5: (42.374,116.301,106.064)
C4: (42.556,117.572,105.564)
P: (48.451,117.621,105.298)
C4': (46.142,120.489,105.633)
C2': (44.531,120.261,107.349)
C2: (41.014,117.286,104.016)
N1: (40.725,116.040,104.382)
N3: (41.901,118.135,104.535)
N6: (41.080,114.251,105.796)
N7: (43.233,116.070,107.131)
N9: (43.552,118.138,106.323)
O5': (47.996,119.114,105.013)
O3': (44.636,122.270,106.047)
Image (generated by PyMOL):
PyMOL image
show in jmol