Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2380:A2379
Extra
PDB:
ATOM 1 O3' A A2379 -129.803 -53.159 33.560 1.00 0.01 O
ATOM 2 P U A2380 -128.523 -52.245 33.795 1.00 0.01 P
ATOM 3 OP1 U A2380 -127.955 -52.643 35.095 1.00 0.01 O
ATOM 4 OP2 U A2380 -128.936 -50.832 33.600 1.00 0.01 O
ATOM 5 O5' U A2380 -127.565 -52.696 32.611 1.00 0.01 O
ATOM 6 C5' U A2380 -127.122 -54.042 32.519 1.00 0.01 C
ATOM 7 C4' U A2380 -126.464 -54.346 31.195 1.00 0.01 C
ATOM 8 O4' U A2380 -127.439 -54.231 30.140 1.00 0.01 O
ATOM 9 C3' U A2380 -125.355 -53.417 30.757 1.00 0.01 C
ATOM 10 O3' U A2380 -124.123 -53.675 31.383 1.00 0.01 O
ATOM 11 C2' U A2380 -125.335 -53.626 29.268 1.00 0.01 C
ATOM 12 O2' U A2380 -124.702 -54.845 28.967 1.00 0.01 O
ATOM 13 C1' U A2380 -126.823 -53.772 28.967 1.00 0.01 C
ATOM 14 N1 U A2380 -127.458 -52.507 28.595 1.00 0.01 N
ATOM 15 C2 U A2380 -127.689 -52.210 27.288 1.00 0.01 C
ATOM 16 O2 U A2380 -127.371 -52.928 26.367 1.00 0.01 O
ATOM 17 N3 U A2380 -128.306 -51.030 27.062 1.00 0.01 N
ATOM 18 C4 U A2380 -128.728 -50.145 27.998 1.00 0.01 C
ATOM 19 O4 U A2380 -129.278 -49.117 27.641 1.00 0.01 O
ATOM 20 C5 U A2380 -128.477 -50.522 29.333 1.00 0.01 C
ATOM 21 C6 U A2380 -127.882 -51.675 29.568 1.00 0.01 C
ATOM 22 P A A2381 -123.565 -52.601 32.439 1.00 0.01 P
ATOM 23 OP1 A A2381 -122.561 -53.262 33.285 1.00 0.01 O
ATOM 24 OP2 A A2381 -124.746 -51.998 33.100 1.00 0.01 O
ATOM 25 O5' A A2381 -122.859 -51.527 31.502 1.00 0.01 O
TER
ATOM 1 O3' C B2378 -134.970 -50.037 33.558 1.00 0.01 O
ATOM 2 P A B2379 -133.496 -49.532 33.818 1.00 0.01 P
ATOM 3 OP1 A B2379 -133.328 -49.411 35.262 1.00 0.01 O
ATOM 4 OP2 A B2379 -133.313 -48.357 32.978 1.00 0.01 O
ATOM 5 O5' A B2379 -132.619 -50.728 33.271 1.00 0.01 O
ATOM 6 C5' A B2379 -132.732 -52.017 33.831 1.00 0.01 C
ATOM 7 C4' A B2379 -132.137 -53.037 32.927 1.00 0.01 C
ATOM 8 O4' A B2379 -132.793 -52.976 31.665 1.00 0.01 O
ATOM 9 C3' A B2379 -130.704 -52.812 32.551 1.00 0.01 C
ATOM 10 O3' A B2379 -129.803 -53.159 33.560 1.00 0.01 O
ATOM 11 C2' A B2379 -130.567 -53.630 31.282 1.00 0.01 C
ATOM 12 O2' A B2379 -130.483 -55.018 31.561 1.00 0.01 O
ATOM 13 C1' A B2379 -131.905 -53.370 30.647 1.00 0.01 C
ATOM 14 N9 A B2379 -131.852 -52.317 29.643 1.00 0.01 N
ATOM 15 C8 A B2379 -132.158 -51.015 29.797 1.00 0.01 C
ATOM 16 N7 A B2379 -132.073 -50.334 28.674 1.00 0.01 N
ATOM 17 C5 A B2379 -131.713 -51.276 27.728 1.00 0.01 C
ATOM 18 C6 A B2379 -131.477 -51.188 26.339 1.00 0.01 C
ATOM 19 N6 A B2379 -131.554 -50.063 25.623 1.00 0.01 N
ATOM 20 N1 A B2379 -131.136 -52.320 25.710 1.00 0.01 N
ATOM 21 C2 A B2379 -131.060 -53.431 26.443 1.00 0.01 C
ATOM 22 N3 A B2379 -131.264 -53.631 27.737 1.00 0.01 N
ATOM 23 C4 A B2379 -131.591 -52.500 28.327 1.00 0.01 C
ATOM 24 P U B2380 -128.523 -52.245 33.795 1.00 0.01 P
ATOM 25 OP1 U B2380 -127.955 -52.643 35.095 1.00 0.01 O
ATOM 26 OP2 U B2380 -128.936 -50.832 33.600 1.00 0.01 O
ATOM 27 O5' U B2380 -127.565 -52.696 32.611 1.00 0.01 O
TER
ATOM 2 P U A2380 -128.523 -52.245 33.795 1.00 0.01 P
ATOM 3 OP1 U A2380 -127.955 -52.643 35.095 1.00 0.01 O
ATOM 4 OP2 U A2380 -128.936 -50.832 33.600 1.00 0.01 O
ATOM 5 O5' U A2380 -127.565 -52.696 32.611 1.00 0.01 O
ATOM 6 C5' U A2380 -127.122 -54.042 32.519 1.00 0.01 C
ATOM 7 C4' U A2380 -126.464 -54.346 31.195 1.00 0.01 C
ATOM 8 O4' U A2380 -127.439 -54.231 30.140 1.00 0.01 O
ATOM 9 C3' U A2380 -125.355 -53.417 30.757 1.00 0.01 C
ATOM 10 O3' U A2380 -124.123 -53.675 31.383 1.00 0.01 O
ATOM 11 C2' U A2380 -125.335 -53.626 29.268 1.00 0.01 C
ATOM 12 O2' U A2380 -124.702 -54.845 28.967 1.00 0.01 O
ATOM 13 C1' U A2380 -126.823 -53.772 28.967 1.00 0.01 C
ATOM 14 N1 U A2380 -127.458 -52.507 28.595 1.00 0.01 N
ATOM 15 C2 U A2380 -127.689 -52.210 27.288 1.00 0.01 C
ATOM 16 O2 U A2380 -127.371 -52.928 26.367 1.00 0.01 O
ATOM 17 N3 U A2380 -128.306 -51.030 27.062 1.00 0.01 N
ATOM 18 C4 U A2380 -128.728 -50.145 27.998 1.00 0.01 C
ATOM 19 O4 U A2380 -129.278 -49.117 27.641 1.00 0.01 O
ATOM 20 C5 U A2380 -128.477 -50.522 29.333 1.00 0.01 C
ATOM 21 C6 U A2380 -127.882 -51.675 29.568 1.00 0.01 C
ATOM 22 P A A2381 -123.565 -52.601 32.439 1.00 0.01 P
ATOM 23 OP1 A A2381 -122.561 -53.262 33.285 1.00 0.01 O
ATOM 24 OP2 A A2381 -124.746 -51.998 33.100 1.00 0.01 O
ATOM 25 O5' A A2381 -122.859 -51.527 31.502 1.00 0.01 O
TER
ATOM 1 O3' C B2378 -134.970 -50.037 33.558 1.00 0.01 O
ATOM 2 P A B2379 -133.496 -49.532 33.818 1.00 0.01 P
ATOM 3 OP1 A B2379 -133.328 -49.411 35.262 1.00 0.01 O
ATOM 4 OP2 A B2379 -133.313 -48.357 32.978 1.00 0.01 O
ATOM 5 O5' A B2379 -132.619 -50.728 33.271 1.00 0.01 O
ATOM 6 C5' A B2379 -132.732 -52.017 33.831 1.00 0.01 C
ATOM 7 C4' A B2379 -132.137 -53.037 32.927 1.00 0.01 C
ATOM 8 O4' A B2379 -132.793 -52.976 31.665 1.00 0.01 O
ATOM 9 C3' A B2379 -130.704 -52.812 32.551 1.00 0.01 C
ATOM 10 O3' A B2379 -129.803 -53.159 33.560 1.00 0.01 O
ATOM 11 C2' A B2379 -130.567 -53.630 31.282 1.00 0.01 C
ATOM 12 O2' A B2379 -130.483 -55.018 31.561 1.00 0.01 O
ATOM 13 C1' A B2379 -131.905 -53.370 30.647 1.00 0.01 C
ATOM 14 N9 A B2379 -131.852 -52.317 29.643 1.00 0.01 N
ATOM 15 C8 A B2379 -132.158 -51.015 29.797 1.00 0.01 C
ATOM 16 N7 A B2379 -132.073 -50.334 28.674 1.00 0.01 N
ATOM 17 C5 A B2379 -131.713 -51.276 27.728 1.00 0.01 C
ATOM 18 C6 A B2379 -131.477 -51.188 26.339 1.00 0.01 C
ATOM 19 N6 A B2379 -131.554 -50.063 25.623 1.00 0.01 N
ATOM 20 N1 A B2379 -131.136 -52.320 25.710 1.00 0.01 N
ATOM 21 C2 A B2379 -131.060 -53.431 26.443 1.00 0.01 C
ATOM 22 N3 A B2379 -131.264 -53.631 27.737 1.00 0.01 N
ATOM 23 C4 A B2379 -131.591 -52.500 28.327 1.00 0.01 C
ATOM 24 P U B2380 -128.523 -52.245 33.795 1.00 0.01 P
ATOM 25 OP1 U B2380 -127.955 -52.643 35.095 1.00 0.01 O
ATOM 26 OP2 U B2380 -128.936 -50.832 33.600 1.00 0.01 O
ATOM 27 O5' U B2380 -127.565 -52.696 32.611 1.00 0.01 O
TER
Atoms:
C4: (-128.728,-50.145,27.998)
N3: (-128.306,-51.030,27.062)
OP1: (-127.955,-52.643,35.095)
OP2: (-128.936,-50.832,33.600)
C2: (-127.689,-52.210,27.288)
C1': (-126.823,-53.772,28.967)
C3': (-125.355,-53.417,30.757)
O5': (-127.565,-52.696,32.611)
O4': (-127.439,-54.231,30.140)
C5': (-127.122,-54.042,32.519)
P: (-128.523,-52.245,33.795)
C4': (-126.464,-54.346,31.195)
C2': (-125.335,-53.626,29.268)
O2': (-124.702,-54.845,28.967)
N1: (-127.458,-52.507,28.595)
O4: (-129.278,-49.117,27.641)
O2: (-127.371,-52.928,26.367)
C6: (-127.882,-51.675,29.568)
C5: (-128.477,-50.522,29.333)
O3': (-124.123,-53.675,31.383)
N3: (-128.306,-51.030,27.062)
OP1: (-127.955,-52.643,35.095)
OP2: (-128.936,-50.832,33.600)
C2: (-127.689,-52.210,27.288)
C1': (-126.823,-53.772,28.967)
C3': (-125.355,-53.417,30.757)
O5': (-127.565,-52.696,32.611)
O4': (-127.439,-54.231,30.140)
C5': (-127.122,-54.042,32.519)
P: (-128.523,-52.245,33.795)
C4': (-126.464,-54.346,31.195)
C2': (-125.335,-53.626,29.268)
O2': (-124.702,-54.845,28.967)
N1: (-127.458,-52.507,28.595)
O4: (-129.278,-49.117,27.641)
O2: (-127.371,-52.928,26.367)
C6: (-127.882,-51.675,29.568)
C5: (-128.477,-50.522,29.333)
O3': (-124.123,-53.675,31.383)
OP1: (-133.328,-49.411,35.262)
OP2: (-133.313,-48.357,32.978)
C3': (-130.704,-52.812,32.551)
C1': (-131.905,-53.370,30.647)
C5': (-132.732,-52.017,33.831)
O4': (-132.793,-52.976,31.665)
C8: (-132.158,-51.015,29.797)
O2': (-130.483,-55.018,31.561)
C6: (-131.477,-51.188,26.339)
C5: (-131.713,-51.276,27.728)
C4: (-131.591,-52.500,28.327)
P: (-133.496,-49.532,33.818)
C4': (-132.137,-53.037,32.927)
C2': (-130.567,-53.630,31.282)
C2: (-131.060,-53.431,26.443)
N1: (-131.136,-52.320,25.710)
N3: (-131.264,-53.631,27.737)
N6: (-131.554,-50.063,25.623)
N7: (-132.073,-50.334,28.674)
N9: (-131.852,-52.317,29.643)
O5': (-132.619,-50.728,33.271)
O3': (-129.803,-53.159,33.560)
OP2: (-133.313,-48.357,32.978)
C3': (-130.704,-52.812,32.551)
C1': (-131.905,-53.370,30.647)
C5': (-132.732,-52.017,33.831)
O4': (-132.793,-52.976,31.665)
C8: (-132.158,-51.015,29.797)
O2': (-130.483,-55.018,31.561)
C6: (-131.477,-51.188,26.339)
C5: (-131.713,-51.276,27.728)
C4: (-131.591,-52.500,28.327)
P: (-133.496,-49.532,33.818)
C4': (-132.137,-53.037,32.927)
C2': (-130.567,-53.630,31.282)
C2: (-131.060,-53.431,26.443)
N1: (-131.136,-52.320,25.710)
N3: (-131.264,-53.631,27.737)
N6: (-131.554,-50.063,25.623)
N7: (-132.073,-50.334,28.674)
N9: (-131.852,-52.317,29.643)
O5': (-132.619,-50.728,33.271)
O3': (-129.803,-53.159,33.560)
Image (generated by PyMOL):