Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:377:3101
Extra
PDB:
ATOM 1 O3' G A 76 38.970 -34.793 8.461 1.00 60.44 O
ATOM 2 P U A 77 39.218 -33.576 9.435 1.00 57.84 P
ATOM 3 OP1 U A 77 40.008 -32.603 8.666 1.00 58.13 O
ATOM 4 OP2 U A 77 39.786 -34.140 10.679 1.00 57.09 O
ATOM 5 O5' U A 77 37.741 -33.005 9.710 1.00 57.68 O
ATOM 6 C5' U A 77 36.856 -32.682 8.641 1.00 58.39 C
ATOM 7 C4' U A 77 35.437 -33.136 8.922 1.00 58.41 C
ATOM 8 O4' U A 77 35.330 -34.539 8.648 1.00 58.84 O
ATOM 9 C3' U A 77 34.942 -33.004 10.363 1.00 57.50 C
ATOM 10 O3' U A 77 34.447 -31.722 10.662 1.00 57.15 O
ATOM 11 C2' U A 77 33.878 -34.070 10.467 1.00 57.72 C
ATOM 12 O2' U A 77 32.671 -33.596 9.925 1.00 58.10 O
ATOM 13 C1' U A 77 34.418 -35.144 9.538 1.00 58.45 C
ATOM 14 N1 U A 77 35.124 -36.193 10.255 1.00 58.12 N
ATOM 15 C2 U A 77 34.500 -36.954 11.216 1.00 57.70 C
ATOM 16 O2 U A 77 33.340 -36.823 11.561 1.00 57.57 O
ATOM 17 N3 U A 77 35.335 -37.902 11.767 1.00 57.45 N
ATOM 18 C4 U A 77 36.661 -38.144 11.461 1.00 57.57 C
ATOM 19 O4 U A 77 37.267 -39.021 12.031 1.00 57.32 O
ATOM 20 C5 U A 77 37.208 -37.326 10.444 1.00 58.02 C
ATOM 21 C6 U A 77 36.438 -36.392 9.896 1.00 58.27 C
ATOM 22 P A A 78 34.956 -30.975 11.979 1.00 56.88 P
ATOM 23 OP1 A A 78 34.492 -29.567 11.886 1.00 56.77 O
ATOM 24 OP2 A A 78 36.413 -31.253 12.089 1.00 56.71 O
ATOM 25 O5' A A 78 34.155 -31.738 13.125 1.00 56.35 O
TER
ATOM 1 O3' G B 100 40.109 -42.638 15.606 1.00 47.72 O
ATOM 2 P A B 101 39.900 -43.451 14.261 1.00 53.74 P
ATOM 3 OP1 A B 101 40.535 -44.753 14.442 1.00 53.87 O
ATOM 4 OP2 A B 101 40.364 -42.577 13.164 1.00 54.22 O
ATOM 5 O5' A B 101 38.340 -43.641 14.190 1.00 53.97 O
ATOM 6 C5' A B 101 37.494 -42.568 14.382 1.00 53.69 C
ATOM 7 C4' A B 101 36.786 -42.709 15.671 1.00 52.97 C
ATOM 8 O4' A B 101 36.528 -41.393 16.194 1.00 52.39 O
ATOM 9 C3' A B 101 35.422 -43.360 15.596 1.00 53.31 C
ATOM 10 O3' A B 101 35.469 -44.788 15.641 1.00 53.60 O
ATOM 11 C2' A B 101 34.707 -42.720 16.764 1.00 52.52 C
ATOM 12 O2' A B 101 35.199 -43.240 17.981 1.00 51.83 O
ATOM 13 C1' A B 101 35.218 -41.306 16.651 1.00 52.23 C
ATOM 14 N9 A B 101 34.472 -40.505 15.675 1.00 52.75 N
ATOM 15 C8 A B 101 34.964 -40.088 14.467 1.00 53.36 C
ATOM 16 N7 A B 101 34.139 -39.345 13.783 1.00 53.73 N
ATOM 17 C5 A B 101 33.048 -39.248 14.630 1.00 53.30 C
ATOM 18 C6 A B 101 31.838 -38.590 14.493 1.00 53.39 C
ATOM 19 N6 A B 101 31.547 -37.886 13.396 1.00 53.96 N
ATOM 20 N1 A B 101 30.954 -38.691 15.515 1.00 52.88 N
ATOM 21 C2 A B 101 31.252 -39.412 16.592 1.00 52.34 C
ATOM 22 N3 A B 101 32.348 -40.083 16.833 1.00 52.19 N
ATOM 23 C4 A B 101 33.215 -39.960 15.800 1.00 52.70 C
ATOM 24 P A B 102 34.323 -45.673 14.908 1.00 51.18 P
ATOM 25 OP1 A B 102 34.476 -47.059 15.385 1.00 51.19 O
ATOM 26 OP2 A B 102 34.412 -45.420 13.451 1.00 52.03 O
ATOM 27 O5' A B 102 32.978 -45.023 15.477 1.00 50.82 O
TER
ATOM 2 P U A 77 39.218 -33.576 9.435 1.00 57.84 P
ATOM 3 OP1 U A 77 40.008 -32.603 8.666 1.00 58.13 O
ATOM 4 OP2 U A 77 39.786 -34.140 10.679 1.00 57.09 O
ATOM 5 O5' U A 77 37.741 -33.005 9.710 1.00 57.68 O
ATOM 6 C5' U A 77 36.856 -32.682 8.641 1.00 58.39 C
ATOM 7 C4' U A 77 35.437 -33.136 8.922 1.00 58.41 C
ATOM 8 O4' U A 77 35.330 -34.539 8.648 1.00 58.84 O
ATOM 9 C3' U A 77 34.942 -33.004 10.363 1.00 57.50 C
ATOM 10 O3' U A 77 34.447 -31.722 10.662 1.00 57.15 O
ATOM 11 C2' U A 77 33.878 -34.070 10.467 1.00 57.72 C
ATOM 12 O2' U A 77 32.671 -33.596 9.925 1.00 58.10 O
ATOM 13 C1' U A 77 34.418 -35.144 9.538 1.00 58.45 C
ATOM 14 N1 U A 77 35.124 -36.193 10.255 1.00 58.12 N
ATOM 15 C2 U A 77 34.500 -36.954 11.216 1.00 57.70 C
ATOM 16 O2 U A 77 33.340 -36.823 11.561 1.00 57.57 O
ATOM 17 N3 U A 77 35.335 -37.902 11.767 1.00 57.45 N
ATOM 18 C4 U A 77 36.661 -38.144 11.461 1.00 57.57 C
ATOM 19 O4 U A 77 37.267 -39.021 12.031 1.00 57.32 O
ATOM 20 C5 U A 77 37.208 -37.326 10.444 1.00 58.02 C
ATOM 21 C6 U A 77 36.438 -36.392 9.896 1.00 58.27 C
ATOM 22 P A A 78 34.956 -30.975 11.979 1.00 56.88 P
ATOM 23 OP1 A A 78 34.492 -29.567 11.886 1.00 56.77 O
ATOM 24 OP2 A A 78 36.413 -31.253 12.089 1.00 56.71 O
ATOM 25 O5' A A 78 34.155 -31.738 13.125 1.00 56.35 O
TER
ATOM 1 O3' G B 100 40.109 -42.638 15.606 1.00 47.72 O
ATOM 2 P A B 101 39.900 -43.451 14.261 1.00 53.74 P
ATOM 3 OP1 A B 101 40.535 -44.753 14.442 1.00 53.87 O
ATOM 4 OP2 A B 101 40.364 -42.577 13.164 1.00 54.22 O
ATOM 5 O5' A B 101 38.340 -43.641 14.190 1.00 53.97 O
ATOM 6 C5' A B 101 37.494 -42.568 14.382 1.00 53.69 C
ATOM 7 C4' A B 101 36.786 -42.709 15.671 1.00 52.97 C
ATOM 8 O4' A B 101 36.528 -41.393 16.194 1.00 52.39 O
ATOM 9 C3' A B 101 35.422 -43.360 15.596 1.00 53.31 C
ATOM 10 O3' A B 101 35.469 -44.788 15.641 1.00 53.60 O
ATOM 11 C2' A B 101 34.707 -42.720 16.764 1.00 52.52 C
ATOM 12 O2' A B 101 35.199 -43.240 17.981 1.00 51.83 O
ATOM 13 C1' A B 101 35.218 -41.306 16.651 1.00 52.23 C
ATOM 14 N9 A B 101 34.472 -40.505 15.675 1.00 52.75 N
ATOM 15 C8 A B 101 34.964 -40.088 14.467 1.00 53.36 C
ATOM 16 N7 A B 101 34.139 -39.345 13.783 1.00 53.73 N
ATOM 17 C5 A B 101 33.048 -39.248 14.630 1.00 53.30 C
ATOM 18 C6 A B 101 31.838 -38.590 14.493 1.00 53.39 C
ATOM 19 N6 A B 101 31.547 -37.886 13.396 1.00 53.96 N
ATOM 20 N1 A B 101 30.954 -38.691 15.515 1.00 52.88 N
ATOM 21 C2 A B 101 31.252 -39.412 16.592 1.00 52.34 C
ATOM 22 N3 A B 101 32.348 -40.083 16.833 1.00 52.19 N
ATOM 23 C4 A B 101 33.215 -39.960 15.800 1.00 52.70 C
ATOM 24 P A B 102 34.323 -45.673 14.908 1.00 51.18 P
ATOM 25 OP1 A B 102 34.476 -47.059 15.385 1.00 51.19 O
ATOM 26 OP2 A B 102 34.412 -45.420 13.451 1.00 52.03 O
ATOM 27 O5' A B 102 32.978 -45.023 15.477 1.00 50.82 O
TER
Atoms:
C4: (36.661,-38.144,11.461)
N3: (35.335,-37.902,11.767)
OP1: (40.008,-32.603,8.666)
OP2: (39.786,-34.140,10.679)
C2: (34.500,-36.954,11.216)
C1': (34.418,-35.144,9.538)
C3': (34.942,-33.004,10.363)
O5': (37.741,-33.005,9.710)
O4': (35.330,-34.539,8.648)
C5': (36.856,-32.682,8.641)
P: (39.218,-33.576,9.435)
C4': (35.437,-33.136,8.922)
C2': (33.878,-34.070,10.467)
O2': (32.671,-33.596,9.925)
N1: (35.124,-36.193,10.255)
O4: (37.267,-39.021,12.031)
O2: (33.340,-36.823,11.561)
C6: (36.438,-36.392,9.896)
C5: (37.208,-37.326,10.444)
O3': (34.447,-31.722,10.662)
N3: (35.335,-37.902,11.767)
OP1: (40.008,-32.603,8.666)
OP2: (39.786,-34.140,10.679)
C2: (34.500,-36.954,11.216)
C1': (34.418,-35.144,9.538)
C3': (34.942,-33.004,10.363)
O5': (37.741,-33.005,9.710)
O4': (35.330,-34.539,8.648)
C5': (36.856,-32.682,8.641)
P: (39.218,-33.576,9.435)
C4': (35.437,-33.136,8.922)
C2': (33.878,-34.070,10.467)
O2': (32.671,-33.596,9.925)
N1: (35.124,-36.193,10.255)
O4: (37.267,-39.021,12.031)
O2: (33.340,-36.823,11.561)
C6: (36.438,-36.392,9.896)
C5: (37.208,-37.326,10.444)
O3': (34.447,-31.722,10.662)
OP1: (40.535,-44.753,14.442)
OP2: (40.364,-42.577,13.164)
C3': (35.422,-43.360,15.596)
C1': (35.218,-41.306,16.651)
C5': (37.494,-42.568,14.382)
O4': (36.528,-41.393,16.194)
C8: (34.964,-40.088,14.467)
O2': (35.199,-43.240,17.981)
C6: (31.838,-38.590,14.493)
C5: (33.048,-39.248,14.630)
C4: (33.215,-39.960,15.800)
P: (39.900,-43.451,14.261)
C4': (36.786,-42.709,15.671)
C2': (34.707,-42.720,16.764)
C2: (31.252,-39.412,16.592)
N1: (30.954,-38.691,15.515)
N3: (32.348,-40.083,16.833)
N6: (31.547,-37.886,13.396)
N7: (34.139,-39.345,13.783)
N9: (34.472,-40.505,15.675)
O5': (38.340,-43.641,14.190)
O3': (35.469,-44.788,15.641)
OP2: (40.364,-42.577,13.164)
C3': (35.422,-43.360,15.596)
C1': (35.218,-41.306,16.651)
C5': (37.494,-42.568,14.382)
O4': (36.528,-41.393,16.194)
C8: (34.964,-40.088,14.467)
O2': (35.199,-43.240,17.981)
C6: (31.838,-38.590,14.493)
C5: (33.048,-39.248,14.630)
C4: (33.215,-39.960,15.800)
P: (39.900,-43.451,14.261)
C4': (36.786,-42.709,15.671)
C2': (34.707,-42.720,16.764)
C2: (31.252,-39.412,16.592)
N1: (30.954,-38.691,15.515)
N3: (32.348,-40.083,16.833)
N6: (31.547,-37.886,13.396)
N7: (34.139,-39.345,13.783)
N9: (34.472,-40.505,15.675)
O5': (38.340,-43.641,14.190)
O3': (35.469,-44.788,15.641)
Image (generated by PyMOL):