ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01050:01049

Extra

PDB:
ATOM 1 O3' A A1049 14.487 105.587 89.592 1.00 46.22 O
ATOM 2 P U A1050 14.385 105.860 91.175 1.00 46.96 P
ATOM 3 OP1 U A1050 14.772 107.273 91.400 1.00 47.31 O
ATOM 4 OP2 U A1050 15.092 104.773 91.902 1.00 47.05 O
ATOM 5 O5' U A1050 12.832 105.738 91.490 1.00 48.20 O
ATOM 6 C5' U A1050 11.892 106.631 90.876 1.00 49.15 C
ATOM 7 C4' U A1050 10.488 106.105 91.036 1.00 50.14 C
ATOM 8 O4' U A1050 10.335 104.852 90.312 1.00 48.44 O
ATOM 9 C3' U A1050 10.088 105.733 92.452 1.00 49.50 C
ATOM 10 O3' U A1050 9.754 106.857 93.240 1.00 50.99 O
ATOM 11 C2' U A1050 8.902 104.821 92.202 1.00 48.99 C
ATOM 12 O2' U A1050 7.741 105.535 91.825 1.00 48.72 O
ATOM 13 C1' U A1050 9.413 104.020 91.006 1.00 48.85 C
ATOM 14 N1 U A1050 10.098 102.789 91.444 1.00 48.88 N
ATOM 15 C2 U A1050 9.309 101.674 91.658 1.00 46.74 C
ATOM 16 O2 U A1050 8.108 101.680 91.490 1.00 48.50 O
ATOM 17 N3 U A1050 9.981 100.555 92.076 1.00 45.57 N
ATOM 18 C4 U A1050 11.334 100.432 92.299 1.00 44.99 C
ATOM 19 O4 U A1050 11.785 99.352 92.674 1.00 43.24 O
ATOM 20 C5 U A1050 12.090 101.622 92.059 1.00 44.57 C
ATOM 21 C6 U A1050 11.465 102.734 91.649 1.00 47.24 C
ATOM 22 P A A1051 9.899 106.766 94.834 1.00 51.11 P
ATOM 23 OP1 A A1051 9.622 108.125 95.347 1.00 49.14 O
ATOM 24 OP2 A A1051 11.193 106.110 95.145 1.00 49.72 O
ATOM 25 O5' A A1051 8.720 105.773 95.260 1.00 52.04 O
TER

ATOM 1 O3' G B1048 18.603 101.123 88.969 1.00 40.80 O
ATOM 2 P A B1049 17.777 101.844 90.137 1.00 40.98 P
ATOM 3 OP1 A B1049 18.589 102.995 90.590 1.00 44.99 O
ATOM 4 OP2 A B1049 17.325 100.829 91.124 1.00 47.18 O
ATOM 5 O5' A B1049 16.500 102.432 89.402 1.00 42.53 O
ATOM 6 C5' A B1049 16.635 103.500 88.456 1.00 45.47 C
ATOM 7 C4' A B1049 15.281 103.942 87.984 1.00 46.10 C
ATOM 8 O4' A B1049 14.648 102.851 87.263 1.00 45.22 O
ATOM 9 C3' A B1049 14.297 104.273 89.092 1.00 45.75 C
ATOM 10 O3' A B1049 14.487 105.587 89.592 1.00 46.22 O
ATOM 11 C2' A B1049 12.964 104.085 88.386 1.00 47.16 C
ATOM 12 O2' A B1049 12.668 105.148 87.498 1.00 48.06 O
ATOM 13 C1' A B1049 13.258 102.843 87.547 1.00 46.77 C
ATOM 14 N9 A B1049 12.937 101.590 88.235 1.00 47.67 N
ATOM 15 C8 A B1049 13.807 100.697 88.818 1.00 45.45 C
ATOM 16 N7 A B1049 13.222 99.639 89.314 1.00 45.38 N
ATOM 17 C5 A B1049 11.874 99.845 89.050 1.00 46.20 C
ATOM 18 C6 A B1049 10.722 99.072 89.316 1.00 45.53 C
ATOM 19 N6 A B1049 10.751 97.880 89.911 1.00 43.46 N
ATOM 20 N1 A B1049 9.527 99.574 88.938 1.00 45.61 N
ATOM 21 C2 A B1049 9.497 100.760 88.322 1.00 45.24 C
ATOM 22 N3 A B1049 10.507 101.574 88.005 1.00 47.04 N
ATOM 23 C4 A B1049 11.682 101.052 88.402 1.00 46.81 C
ATOM 24 P U B1050 14.385 105.860 91.175 1.00 46.96 P
ATOM 25 OP1 U B1050 14.772 107.273 91.400 1.00 47.31 O
ATOM 26 OP2 U B1050 15.092 104.773 91.902 1.00 47.05 O
ATOM 27 O5' U B1050 12.832 105.738 91.490 1.00 48.20 O
TER

Atoms:
C4: (11.334,100.432,92.299)
N3: (9.981,100.555,92.076)
OP1: (14.772,107.273,91.400)
OP2: (15.092,104.773,91.902)
C2: (9.309,101.674,91.658)
C1': (9.413,104.020,91.006)
C3': (10.088,105.733,92.452)
O5': (12.832,105.738,91.490)
O4': (10.335,104.852,90.312)
C5': (11.892,106.631,90.876)
P: (14.385,105.860,91.175)
C4': (10.488,106.105,91.036)
C2': (8.902,104.821,92.202)
O2': (7.741,105.535,91.825)
N1: (10.098,102.789,91.444)
O4: (11.785,99.352,92.674)
O2: (8.108,101.680,91.490)
C6: (11.465,102.734,91.649)
C5: (12.090,101.622,92.059)
O3': (9.754,106.857,93.240)
OP1: (18.589,102.995,90.590)
OP2: (17.325,100.829,91.124)
C3': (14.297,104.273,89.092)
C1': (13.258,102.843,87.547)
C5': (16.635,103.500,88.456)
O4': (14.648,102.851,87.263)
C8: (13.807,100.697,88.818)
O2': (12.668,105.148,87.498)
C6: (10.722,99.072,89.316)
C5: (11.874,99.845,89.050)
C4: (11.682,101.052,88.402)
P: (17.777,101.844,90.137)
C4': (15.281,103.942,87.984)
C2': (12.964,104.085,88.386)
C2: (9.497,100.760,88.322)
N1: (9.527,99.574,88.938)
N3: (10.507,101.574,88.005)
N6: (10.751,97.880,89.911)
N7: (13.222,99.639,89.314)
N9: (12.937,101.590,88.235)
O5': (16.500,102.432,89.402)
O3': (14.487,105.587,89.592)
Image (generated by PyMOL):
PyMOL image
show in jmol