Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02628:02622
Extra
PDB:
ATOM 1 O3' A A2627 48.722 101.882 167.553 1.00 56.93 O
ATOM 2 P U A2628 48.363 103.408 167.254 1.00 58.04 P
ATOM 3 OP1 U A2628 49.532 104.285 167.522 1.00 54.91 O
ATOM 4 OP2 U A2628 47.084 103.642 167.977 1.00 58.26 O
ATOM 5 O5' U A2628 48.045 103.413 165.691 1.00 56.48 O
ATOM 6 C5' U A2628 49.043 103.010 164.736 1.00 56.09 C
ATOM 7 C4' U A2628 48.471 103.012 163.334 1.00 56.22 C
ATOM 8 O4' U A2628 47.475 101.964 163.187 1.00 54.91 O
ATOM 9 C3' U A2628 47.758 104.284 162.907 1.00 53.98 C
ATOM 10 O3' U A2628 48.694 105.244 162.444 1.00 54.00 O
ATOM 11 C2' U A2628 46.865 103.786 161.779 1.00 53.34 C
ATOM 12 O2' U A2628 47.570 103.655 160.564 1.00 52.46 O
ATOM 13 C1' U A2628 46.466 102.399 162.296 1.00 53.71 C
ATOM 14 N1 U A2628 45.196 102.421 163.029 1.00 56.40 N
ATOM 15 C2 U A2628 44.045 102.098 162.334 1.00 57.67 C
ATOM 16 O2 U A2628 44.045 101.771 161.154 1.00 57.00 O
ATOM 17 N3 U A2628 42.889 102.172 163.074 1.00 58.29 N
ATOM 18 C4 U A2628 42.772 102.520 164.405 1.00 56.71 C
ATOM 19 O4 U A2628 41.657 102.564 164.919 1.00 57.10 O
ATOM 20 C5 U A2628 44.006 102.824 165.055 1.00 56.94 C
ATOM 21 C6 U A2628 45.147 102.765 164.368 1.00 56.73 C
ATOM 22 P C A2629 48.870 106.631 163.226 1.00 54.65 P
ATOM 23 OP1 C A2629 50.301 106.986 163.224 1.00 56.38 O
ATOM 24 OP2 C A2629 48.142 106.519 164.515 1.00 58.24 O
ATOM 25 O5' C A2629 48.124 107.700 162.317 1.00 53.71 O
TER
ATOM 1 O3' G B2621 37.150 104.350 166.476 1.00 57.67 O
ATOM 2 P A B2622 37.814 103.067 167.170 1.00 57.98 P
ATOM 3 OP1 A B2622 36.999 102.768 168.353 1.00 59.32 O
ATOM 4 OP2 A B2622 39.275 103.274 167.317 1.00 57.69 O
ATOM 5 O5' A B2622 37.567 101.913 166.113 1.00 59.32 O
ATOM 6 C5' A B2622 36.234 101.498 165.845 1.00 62.14 C
ATOM 7 C4' A B2622 36.059 101.121 164.391 1.00 63.04 C
ATOM 8 O4' A B2622 36.721 102.073 163.523 1.00 62.86 O
ATOM 9 C3' A B2622 36.646 99.815 163.898 1.00 60.28 C
ATOM 10 O3' A B2622 35.856 98.719 164.336 1.00 59.16 O
ATOM 11 C2' A B2622 36.480 100.009 162.398 1.00 62.35 C
ATOM 12 O2' A B2622 35.122 99.874 162.021 1.00 62.63 O
ATOM 13 C1' A B2622 36.853 101.486 162.243 1.00 62.55 C
ATOM 14 N9 A B2622 38.219 101.689 161.758 1.00 63.80 N
ATOM 15 C8 A B2622 39.347 102.026 162.466 1.00 63.32 C
ATOM 16 N7 A B2622 40.424 102.123 161.725 1.00 63.80 N
ATOM 17 C5 A B2622 39.976 101.829 160.443 1.00 64.55 C
ATOM 18 C6 A B2622 40.633 101.752 159.203 1.00 65.03 C
ATOM 19 N6 A B2622 41.941 101.959 159.042 1.00 66.92 N
ATOM 20 N1 A B2622 39.893 101.444 158.119 1.00 65.22 N
ATOM 21 C2 A B2622 38.587 101.219 158.280 1.00 64.94 C
ATOM 22 N3 A B2622 37.859 101.249 159.389 1.00 64.06 N
ATOM 23 C4 A B2622 38.621 101.565 160.449 1.00 63.94 C
ATOM 24 P A B2623 36.457 97.233 164.304 1.00 59.70 P
ATOM 25 OP1 A B2623 35.507 96.343 165.017 1.00 61.14 O
ATOM 26 OP2 A B2623 37.867 97.291 164.738 1.00 58.61 O
ATOM 27 O5' A B2623 36.398 96.828 162.766 1.00 59.96 O
TER
ATOM 2 P U A2628 48.363 103.408 167.254 1.00 58.04 P
ATOM 3 OP1 U A2628 49.532 104.285 167.522 1.00 54.91 O
ATOM 4 OP2 U A2628 47.084 103.642 167.977 1.00 58.26 O
ATOM 5 O5' U A2628 48.045 103.413 165.691 1.00 56.48 O
ATOM 6 C5' U A2628 49.043 103.010 164.736 1.00 56.09 C
ATOM 7 C4' U A2628 48.471 103.012 163.334 1.00 56.22 C
ATOM 8 O4' U A2628 47.475 101.964 163.187 1.00 54.91 O
ATOM 9 C3' U A2628 47.758 104.284 162.907 1.00 53.98 C
ATOM 10 O3' U A2628 48.694 105.244 162.444 1.00 54.00 O
ATOM 11 C2' U A2628 46.865 103.786 161.779 1.00 53.34 C
ATOM 12 O2' U A2628 47.570 103.655 160.564 1.00 52.46 O
ATOM 13 C1' U A2628 46.466 102.399 162.296 1.00 53.71 C
ATOM 14 N1 U A2628 45.196 102.421 163.029 1.00 56.40 N
ATOM 15 C2 U A2628 44.045 102.098 162.334 1.00 57.67 C
ATOM 16 O2 U A2628 44.045 101.771 161.154 1.00 57.00 O
ATOM 17 N3 U A2628 42.889 102.172 163.074 1.00 58.29 N
ATOM 18 C4 U A2628 42.772 102.520 164.405 1.00 56.71 C
ATOM 19 O4 U A2628 41.657 102.564 164.919 1.00 57.10 O
ATOM 20 C5 U A2628 44.006 102.824 165.055 1.00 56.94 C
ATOM 21 C6 U A2628 45.147 102.765 164.368 1.00 56.73 C
ATOM 22 P C A2629 48.870 106.631 163.226 1.00 54.65 P
ATOM 23 OP1 C A2629 50.301 106.986 163.224 1.00 56.38 O
ATOM 24 OP2 C A2629 48.142 106.519 164.515 1.00 58.24 O
ATOM 25 O5' C A2629 48.124 107.700 162.317 1.00 53.71 O
TER
ATOM 1 O3' G B2621 37.150 104.350 166.476 1.00 57.67 O
ATOM 2 P A B2622 37.814 103.067 167.170 1.00 57.98 P
ATOM 3 OP1 A B2622 36.999 102.768 168.353 1.00 59.32 O
ATOM 4 OP2 A B2622 39.275 103.274 167.317 1.00 57.69 O
ATOM 5 O5' A B2622 37.567 101.913 166.113 1.00 59.32 O
ATOM 6 C5' A B2622 36.234 101.498 165.845 1.00 62.14 C
ATOM 7 C4' A B2622 36.059 101.121 164.391 1.00 63.04 C
ATOM 8 O4' A B2622 36.721 102.073 163.523 1.00 62.86 O
ATOM 9 C3' A B2622 36.646 99.815 163.898 1.00 60.28 C
ATOM 10 O3' A B2622 35.856 98.719 164.336 1.00 59.16 O
ATOM 11 C2' A B2622 36.480 100.009 162.398 1.00 62.35 C
ATOM 12 O2' A B2622 35.122 99.874 162.021 1.00 62.63 O
ATOM 13 C1' A B2622 36.853 101.486 162.243 1.00 62.55 C
ATOM 14 N9 A B2622 38.219 101.689 161.758 1.00 63.80 N
ATOM 15 C8 A B2622 39.347 102.026 162.466 1.00 63.32 C
ATOM 16 N7 A B2622 40.424 102.123 161.725 1.00 63.80 N
ATOM 17 C5 A B2622 39.976 101.829 160.443 1.00 64.55 C
ATOM 18 C6 A B2622 40.633 101.752 159.203 1.00 65.03 C
ATOM 19 N6 A B2622 41.941 101.959 159.042 1.00 66.92 N
ATOM 20 N1 A B2622 39.893 101.444 158.119 1.00 65.22 N
ATOM 21 C2 A B2622 38.587 101.219 158.280 1.00 64.94 C
ATOM 22 N3 A B2622 37.859 101.249 159.389 1.00 64.06 N
ATOM 23 C4 A B2622 38.621 101.565 160.449 1.00 63.94 C
ATOM 24 P A B2623 36.457 97.233 164.304 1.00 59.70 P
ATOM 25 OP1 A B2623 35.507 96.343 165.017 1.00 61.14 O
ATOM 26 OP2 A B2623 37.867 97.291 164.738 1.00 58.61 O
ATOM 27 O5' A B2623 36.398 96.828 162.766 1.00 59.96 O
TER
Atoms:
C4: (42.772,102.520,164.405)
N3: (42.889,102.172,163.074)
OP1: (49.532,104.285,167.522)
OP2: (47.084,103.642,167.977)
C2: (44.045,102.098,162.334)
C1': (46.466,102.399,162.296)
C3': (47.758,104.284,162.907)
O5': (48.045,103.413,165.691)
O4': (47.475,101.964,163.187)
C5': (49.043,103.010,164.736)
P: (48.363,103.408,167.254)
C4': (48.471,103.012,163.334)
C2': (46.865,103.786,161.779)
O2': (47.570,103.655,160.564)
N1: (45.196,102.421,163.029)
O4: (41.657,102.564,164.919)
O2: (44.045,101.771,161.154)
C6: (45.147,102.765,164.368)
C5: (44.006,102.824,165.055)
O3': (48.694,105.244,162.444)
N3: (42.889,102.172,163.074)
OP1: (49.532,104.285,167.522)
OP2: (47.084,103.642,167.977)
C2: (44.045,102.098,162.334)
C1': (46.466,102.399,162.296)
C3': (47.758,104.284,162.907)
O5': (48.045,103.413,165.691)
O4': (47.475,101.964,163.187)
C5': (49.043,103.010,164.736)
P: (48.363,103.408,167.254)
C4': (48.471,103.012,163.334)
C2': (46.865,103.786,161.779)
O2': (47.570,103.655,160.564)
N1: (45.196,102.421,163.029)
O4: (41.657,102.564,164.919)
O2: (44.045,101.771,161.154)
C6: (45.147,102.765,164.368)
C5: (44.006,102.824,165.055)
O3': (48.694,105.244,162.444)
OP1: (36.999,102.768,168.353)
OP2: (39.275,103.274,167.317)
C3': (36.646,99.815,163.898)
C1': (36.853,101.486,162.243)
C5': (36.234,101.498,165.845)
O4': (36.721,102.073,163.523)
C8: (39.347,102.026,162.466)
O2': (35.122,99.874,162.021)
C6: (40.633,101.752,159.203)
C5: (39.976,101.829,160.443)
C4: (38.621,101.565,160.449)
P: (37.814,103.067,167.170)
C4': (36.059,101.121,164.391)
C2': (36.480,100.009,162.398)
C2: (38.587,101.219,158.280)
N1: (39.893,101.444,158.119)
N3: (37.859,101.249,159.389)
N6: (41.941,101.959,159.042)
N7: (40.424,102.123,161.725)
N9: (38.219,101.689,161.758)
O5': (37.567,101.913,166.113)
O3': (35.856,98.719,164.336)
OP2: (39.275,103.274,167.317)
C3': (36.646,99.815,163.898)
C1': (36.853,101.486,162.243)
C5': (36.234,101.498,165.845)
O4': (36.721,102.073,163.523)
C8: (39.347,102.026,162.466)
O2': (35.122,99.874,162.021)
C6: (40.633,101.752,159.203)
C5: (39.976,101.829,160.443)
C4: (38.621,101.565,160.449)
P: (37.814,103.067,167.170)
C4': (36.059,101.121,164.391)
C2': (36.480,100.009,162.398)
C2: (38.587,101.219,158.280)
N1: (39.893,101.444,158.119)
N3: (37.859,101.249,159.389)
N6: (41.941,101.959,159.042)
N7: (40.424,102.123,161.725)
N9: (38.219,101.689,161.758)
O5': (37.567,101.913,166.113)
O3': (35.856,98.719,164.336)
Image (generated by PyMOL):