ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1703:A1710

Extra

PDB:
ATOM 1 O3' U A1702 55.393 -31.310 -13.001 1.00 28.49 O
ATOM 2 P U A1703 55.423 -32.823 -12.475 1.00 29.87 P
ATOM 3 OP1 U A1703 54.527 -33.633 -13.322 1.00 40.18 O
ATOM 4 OP2 U A1703 55.164 -32.774 -11.024 1.00 32.03 O
ATOM 5 O5' U A1703 56.920 -33.231 -12.763 1.00 31.75 O
ATOM 6 C5' U A1703 57.539 -32.913 -13.988 1.00 29.06 C
ATOM 7 C4' U A1703 58.985 -33.266 -13.921 1.00 32.31 C
ATOM 8 O4' U A1703 59.646 -32.356 -13.023 1.00 31.96 O
ATOM 9 C3' U A1703 59.266 -34.650 -13.366 1.00 28.76 C
ATOM 10 O3' U A1703 59.295 -35.630 -14.375 1.00 24.10 O
ATOM 11 C2' U A1703 60.588 -34.514 -12.624 1.00 31.14 C
ATOM 12 O2' U A1703 61.668 -34.860 -13.463 1.00 36.36 O
ATOM 13 C1' U A1703 60.664 -33.020 -12.324 1.00 34.47 C
ATOM 14 N1 U A1703 60.533 -32.698 -10.898 1.00 35.24 N
ATOM 15 C2 U A1703 61.702 -32.624 -10.178 1.00 33.62 C
ATOM 16 O2 U A1703 62.792 -32.892 -10.655 1.00 35.16 O
ATOM 17 N3 U A1703 61.541 -32.244 -8.888 1.00 31.85 N
ATOM 18 C4 U A1703 60.361 -31.919 -8.285 1.00 32.54 C
ATOM 19 O4 U A1703 60.406 -31.598 -7.106 1.00 31.06 O
ATOM 20 C5 U A1703 59.187 -32.014 -9.099 1.00 34.66 C
ATOM 21 C6 U A1703 59.319 -32.371 -10.373 1.00 33.80 C
ATOM 22 P U A1704 58.889 -37.139 -14.033 1.00 22.22 P
ATOM 23 OP1 U A1704 58.317 -37.713 -15.273 1.00 28.14 O
ATOM 24 OP2 U A1704 58.064 -37.118 -12.759 1.00 19.07 O
ATOM 25 O5' U A1704 60.271 -37.813 -13.758 1.00 32.45 O
TER

ATOM 1 O3' A B1709 60.684 -33.466 -2.348 1.00 26.13 O
ATOM 2 P A B1710 61.377 -32.970 -0.993 1.00 31.54 P
ATOM 3 OP1 A B1710 61.491 -34.144 -0.093 1.00 40.51 O
ATOM 4 OP2 A B1710 60.599 -31.785 -0.535 1.00 44.30 O
ATOM 5 O5' A B1710 62.811 -32.513 -1.475 1.00 27.03 O
ATOM 6 C5' A B1710 62.937 -31.351 -2.246 1.00 31.39 C
ATOM 7 C4' A B1710 64.356 -30.983 -2.471 1.00 27.28 C
ATOM 8 O4' A B1710 64.922 -31.885 -3.430 1.00 26.73 O
ATOM 9 C3' A B1710 64.563 -29.620 -3.078 1.00 28.59 C
ATOM 10 O3' A B1710 64.507 -28.586 -2.113 1.00 25.17 O
ATOM 11 C2' A B1710 65.904 -29.753 -3.784 1.00 29.71 C
ATOM 12 O2' A B1710 66.964 -29.576 -2.868 1.00 34.70 O
ATOM 13 C1' A B1710 65.883 -31.217 -4.213 1.00 30.56 C
ATOM 14 N9 A B1710 65.521 -31.409 -5.623 1.00 30.72 N
ATOM 15 C8 A B1710 64.259 -31.428 -6.117 1.00 34.11 C
ATOM 16 N7 A B1710 64.195 -31.689 -7.400 1.00 34.97 N
ATOM 17 C5 A B1710 65.500 -31.880 -7.770 1.00 27.67 C
ATOM 18 C6 A B1710 66.071 -32.183 -8.998 1.00 29.16 C
ATOM 19 N6 A B1710 65.384 -32.347 -10.126 1.00 36.00 N
ATOM 20 N1 A B1710 67.393 -32.304 -9.032 1.00 31.65 N
ATOM 21 C2 A B1710 68.080 -32.130 -7.904 1.00 33.79 C
ATOM 22 N3 A B1710 67.653 -31.842 -6.678 1.00 33.37 N
ATOM 23 C4 A B1710 66.328 -31.726 -6.682 1.00 30.05 C
ATOM 24 P A B1711 64.291 -27.060 -2.583 1.00 40.05 P
ATOM 25 OP1 A B1711 63.492 -26.363 -1.537 1.00 24.49 O
ATOM 26 OP2 A B1711 63.763 -27.082 -3.973 1.00 33.18 O
ATOM 27 O5' A B1711 65.774 -26.501 -2.589 1.00 37.07 O
TER

Atoms:
C4: (60.361,-31.919,-8.285)
N3: (61.541,-32.244,-8.888)
OP1: (54.527,-33.633,-13.322)
OP2: (55.164,-32.774,-11.024)
C2: (61.702,-32.624,-10.178)
C1': (60.664,-33.020,-12.324)
C3': (59.266,-34.650,-13.366)
O5': (56.920,-33.231,-12.763)
O4': (59.646,-32.356,-13.023)
C5': (57.539,-32.913,-13.988)
P: (55.423,-32.823,-12.475)
C4': (58.985,-33.266,-13.921)
C2': (60.588,-34.514,-12.624)
O2': (61.668,-34.860,-13.463)
N1: (60.533,-32.698,-10.898)
O4: (60.406,-31.598,-7.106)
O2: (62.792,-32.892,-10.655)
C6: (59.319,-32.371,-10.373)
C5: (59.187,-32.014,-9.099)
O3': (59.295,-35.630,-14.375)
OP1: (61.491,-34.144,-0.093)
OP2: (60.599,-31.785,-0.535)
C3': (64.563,-29.620,-3.078)
C1': (65.883,-31.217,-4.213)
C5': (62.937,-31.351,-2.246)
O4': (64.922,-31.885,-3.430)
C8: (64.259,-31.428,-6.117)
O2': (66.964,-29.576,-2.868)
C6: (66.071,-32.183,-8.998)
C5: (65.500,-31.880,-7.770)
C4: (66.328,-31.726,-6.682)
P: (61.377,-32.970,-0.993)
C4': (64.356,-30.983,-2.471)
C2': (65.904,-29.753,-3.784)
C2: (68.080,-32.130,-7.904)
N1: (67.393,-32.304,-9.032)
N3: (67.653,-31.842,-6.678)
N6: (65.384,-32.347,-10.126)
N7: (64.195,-31.689,-7.400)
N9: (65.521,-31.409,-5.623)
O5': (62.811,-32.513,-1.475)
O3': (64.507,-28.586,-2.113)
Image (generated by PyMOL):
PyMOL image
show in jmol