Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A11:A525
Extra
PDB:
ATOM 1 O3' C A 10 -55.749-112.287 -13.395 1.00 10.11 O
ATOM 2 P U A 11 -55.524-110.740 -13.022 1.00 29.32 P
ATOM 3 OP1 U A 11 -55.557-110.659 -11.550 1.00 29.32 O
ATOM 4 OP2 U A 11 -56.509-109.942 -13.805 1.00 29.32 O
ATOM 5 O5' U A 11 -54.044-110.449 -13.562 1.00 29.32 O
ATOM 6 C5' U A 11 -53.720-110.625 -14.938 1.00 29.32 C
ATOM 7 C4' U A 11 -53.058-109.399 -15.537 1.00 29.32 C
ATOM 8 O4' U A 11 -53.946-108.791 -16.512 1.00 29.32 O
ATOM 9 C3' U A 11 -52.719-108.253 -14.574 1.00 29.32 C
ATOM 10 O3' U A 11 -51.504-108.453 -13.882 1.00 29.32 O
ATOM 11 C2' U A 11 -52.682-107.032 -15.485 1.00 29.32 C
ATOM 12 O2' U A 11 -51.408-106.896 -16.100 1.00 29.32 O
ATOM 13 C1' U A 11 -53.724-107.388 -16.557 1.00 29.32 C
ATOM 14 N1 U A 11 -55.030-106.666 -16.359 1.00 28.81 N
ATOM 15 C2 U A 11 -55.044-105.379 -15.806 1.00 28.81 C
ATOM 16 O2 U A 11 -54.066-104.776 -15.424 1.00 28.81 O
ATOM 17 N3 U A 11 -56.265-104.783 -15.676 1.00 28.81 N
ATOM 18 C4 U A 11 -57.479-105.307 -16.033 1.00 28.81 C
ATOM 19 O4 U A 11 -58.489-104.626 -15.845 1.00 28.81 O
ATOM 20 C5 U A 11 -57.410-106.627 -16.609 1.00 28.81 C
ATOM 21 C6 U A 11 -56.222-107.240 -16.756 1.00 28.81 C
ATOM 22 P A A 12 -51.099-107.522 -12.634 1.00 0.01 P
ATOM 23 OP1 A A 12 -49.622-107.571 -12.553 1.00 0.01 O
ATOM 24 OP2 A A 12 -51.900-107.972 -11.459 1.00 0.01 O
ATOM 25 O5' A A 12 -51.559-106.060 -13.052 1.00 0.01 O
TER
ATOM 1 O3' U B 524 -63.512-103.356 -11.701 1.00 0.01 O
ATOM 2 P A B 525 -62.946-103.717 -13.133 1.00 0.01 P
ATOM 3 OP1 A B 525 -64.067-103.831 -14.020 1.00 0.01 O
ATOM 4 OP2 A B 525 -62.072-104.852 -12.974 1.00 0.01 O
ATOM 5 O5' A B 525 -62.104-102.453 -13.510 1.00 0.01 O
ATOM 6 C5' A B 525 -62.696-101.169 -13.555 1.00 0.01 C
ATOM 7 C4' A B 525 -61.960-100.261 -14.507 1.00 0.01 C
ATOM 8 O4' A B 525 -60.604-100.100 -14.067 1.00 0.01 O
ATOM 9 C3' A B 525 -61.838-100.752 -15.927 1.00 0.01 C
ATOM 10 O3' A B 525 -62.973-100.412 -16.700 1.00 0.01 O
ATOM 11 C2' A B 525 -60.548-100.104 -16.430 1.00 0.01 C
ATOM 12 O2' A B 525 -60.834 -98.870 -17.045 1.00 0.01 O
ATOM 13 C1' A B 525 -59.778 -99.822 -15.153 1.00 0.01 C
ATOM 14 N9 A B 525 -58.547-100.588 -14.981 1.00 0.01 N
ATOM 15 C8 A B 525 -58.436-101.807 -14.429 1.00 0.01 C
ATOM 16 N7 A B 525 -57.208-102.217 -14.238 1.00 0.01 N
ATOM 17 C5 A B 525 -56.446-101.144 -14.636 1.00 0.01 C
ATOM 18 C6 A B 525 -55.066-100.924 -14.668 1.00 0.01 C
ATOM 19 N6 A B 525 -54.100-101.761 -14.310 1.00 0.01 N
ATOM 20 N1 A B 525 -54.670 -99.757 -15.102 1.00 0.01 N
ATOM 21 C2 A B 525 -55.585 -98.883 -15.470 1.00 0.01 C
ATOM 22 N3 A B 525 -56.890 -98.973 -15.491 1.00 0.01 N
ATOM 23 C4 A B 525 -57.271-100.141 -15.051 1.00 0.01 C
ATOM 24 P C B 526 -63.820-101.554 -17.421 1.00 0.01 P
ATOM 25 OP1 C B 526 -64.148-102.525 -16.415 1.00 0.01 O
ATOM 26 OP2 C B 526 -63.065-101.980 -18.585 1.00 0.01 O
ATOM 27 O5' C B 526 -65.129-100.804 -17.872 1.00 0.01 O
TER
ATOM 2 P U A 11 -55.524-110.740 -13.022 1.00 29.32 P
ATOM 3 OP1 U A 11 -55.557-110.659 -11.550 1.00 29.32 O
ATOM 4 OP2 U A 11 -56.509-109.942 -13.805 1.00 29.32 O
ATOM 5 O5' U A 11 -54.044-110.449 -13.562 1.00 29.32 O
ATOM 6 C5' U A 11 -53.720-110.625 -14.938 1.00 29.32 C
ATOM 7 C4' U A 11 -53.058-109.399 -15.537 1.00 29.32 C
ATOM 8 O4' U A 11 -53.946-108.791 -16.512 1.00 29.32 O
ATOM 9 C3' U A 11 -52.719-108.253 -14.574 1.00 29.32 C
ATOM 10 O3' U A 11 -51.504-108.453 -13.882 1.00 29.32 O
ATOM 11 C2' U A 11 -52.682-107.032 -15.485 1.00 29.32 C
ATOM 12 O2' U A 11 -51.408-106.896 -16.100 1.00 29.32 O
ATOM 13 C1' U A 11 -53.724-107.388 -16.557 1.00 29.32 C
ATOM 14 N1 U A 11 -55.030-106.666 -16.359 1.00 28.81 N
ATOM 15 C2 U A 11 -55.044-105.379 -15.806 1.00 28.81 C
ATOM 16 O2 U A 11 -54.066-104.776 -15.424 1.00 28.81 O
ATOM 17 N3 U A 11 -56.265-104.783 -15.676 1.00 28.81 N
ATOM 18 C4 U A 11 -57.479-105.307 -16.033 1.00 28.81 C
ATOM 19 O4 U A 11 -58.489-104.626 -15.845 1.00 28.81 O
ATOM 20 C5 U A 11 -57.410-106.627 -16.609 1.00 28.81 C
ATOM 21 C6 U A 11 -56.222-107.240 -16.756 1.00 28.81 C
ATOM 22 P A A 12 -51.099-107.522 -12.634 1.00 0.01 P
ATOM 23 OP1 A A 12 -49.622-107.571 -12.553 1.00 0.01 O
ATOM 24 OP2 A A 12 -51.900-107.972 -11.459 1.00 0.01 O
ATOM 25 O5' A A 12 -51.559-106.060 -13.052 1.00 0.01 O
TER
ATOM 1 O3' U B 524 -63.512-103.356 -11.701 1.00 0.01 O
ATOM 2 P A B 525 -62.946-103.717 -13.133 1.00 0.01 P
ATOM 3 OP1 A B 525 -64.067-103.831 -14.020 1.00 0.01 O
ATOM 4 OP2 A B 525 -62.072-104.852 -12.974 1.00 0.01 O
ATOM 5 O5' A B 525 -62.104-102.453 -13.510 1.00 0.01 O
ATOM 6 C5' A B 525 -62.696-101.169 -13.555 1.00 0.01 C
ATOM 7 C4' A B 525 -61.960-100.261 -14.507 1.00 0.01 C
ATOM 8 O4' A B 525 -60.604-100.100 -14.067 1.00 0.01 O
ATOM 9 C3' A B 525 -61.838-100.752 -15.927 1.00 0.01 C
ATOM 10 O3' A B 525 -62.973-100.412 -16.700 1.00 0.01 O
ATOM 11 C2' A B 525 -60.548-100.104 -16.430 1.00 0.01 C
ATOM 12 O2' A B 525 -60.834 -98.870 -17.045 1.00 0.01 O
ATOM 13 C1' A B 525 -59.778 -99.822 -15.153 1.00 0.01 C
ATOM 14 N9 A B 525 -58.547-100.588 -14.981 1.00 0.01 N
ATOM 15 C8 A B 525 -58.436-101.807 -14.429 1.00 0.01 C
ATOM 16 N7 A B 525 -57.208-102.217 -14.238 1.00 0.01 N
ATOM 17 C5 A B 525 -56.446-101.144 -14.636 1.00 0.01 C
ATOM 18 C6 A B 525 -55.066-100.924 -14.668 1.00 0.01 C
ATOM 19 N6 A B 525 -54.100-101.761 -14.310 1.00 0.01 N
ATOM 20 N1 A B 525 -54.670 -99.757 -15.102 1.00 0.01 N
ATOM 21 C2 A B 525 -55.585 -98.883 -15.470 1.00 0.01 C
ATOM 22 N3 A B 525 -56.890 -98.973 -15.491 1.00 0.01 N
ATOM 23 C4 A B 525 -57.271-100.141 -15.051 1.00 0.01 C
ATOM 24 P C B 526 -63.820-101.554 -17.421 1.00 0.01 P
ATOM 25 OP1 C B 526 -64.148-102.525 -16.415 1.00 0.01 O
ATOM 26 OP2 C B 526 -63.065-101.980 -18.585 1.00 0.01 O
ATOM 27 O5' C B 526 -65.129-100.804 -17.872 1.00 0.01 O
TER
Atoms:
C4: (-57.479,-105.307,-16.033)
N3: (-56.265,-104.783,-15.676)
OP1: (-55.557,-110.659,-11.550)
OP2: (-56.509,-109.942,-13.805)
C2: (-55.044,-105.379,-15.806)
C1': (-53.724,-107.388,-16.557)
C3': (-52.719,-108.253,-14.574)
O5': (-54.044,-110.449,-13.562)
O4': (-53.946,-108.791,-16.512)
C5': (-53.720,-110.625,-14.938)
P: (-55.524,-110.740,-13.022)
C4': (-53.058,-109.399,-15.537)
C2': (-52.682,-107.032,-15.485)
O2': (-51.408,-106.896,-16.100)
N1: (-55.030,-106.666,-16.359)
O4: (-58.489,-104.626,-15.845)
O2: (-54.066,-104.776,-15.424)
C6: (-56.222,-107.240,-16.756)
C5: (-57.410,-106.627,-16.609)
O3': (-51.504,-108.453,-13.882)
N3: (-56.265,-104.783,-15.676)
OP1: (-55.557,-110.659,-11.550)
OP2: (-56.509,-109.942,-13.805)
C2: (-55.044,-105.379,-15.806)
C1': (-53.724,-107.388,-16.557)
C3': (-52.719,-108.253,-14.574)
O5': (-54.044,-110.449,-13.562)
O4': (-53.946,-108.791,-16.512)
C5': (-53.720,-110.625,-14.938)
P: (-55.524,-110.740,-13.022)
C4': (-53.058,-109.399,-15.537)
C2': (-52.682,-107.032,-15.485)
O2': (-51.408,-106.896,-16.100)
N1: (-55.030,-106.666,-16.359)
O4: (-58.489,-104.626,-15.845)
O2: (-54.066,-104.776,-15.424)
C6: (-56.222,-107.240,-16.756)
C5: (-57.410,-106.627,-16.609)
O3': (-51.504,-108.453,-13.882)
OP1: (-64.067,-103.831,-14.020)
OP2: (-62.072,-104.852,-12.974)
C3': (-61.838,-100.752,-15.927)
C1': (-59.778,-99.822,-15.153)
C5': (-62.696,-101.169,-13.555)
O4': (-60.604,-100.100,-14.067)
C8: (-58.436,-101.807,-14.429)
O2': (-60.834,-98.870,-17.045)
C6: (-55.066,-100.924,-14.668)
C5: (-56.446,-101.144,-14.636)
C4: (-57.271,-100.141,-15.051)
P: (-62.946,-103.717,-13.133)
C4': (-61.960,-100.261,-14.507)
C2': (-60.548,-100.104,-16.430)
C2: (-55.585,-98.883,-15.470)
N1: (-54.670,-99.757,-15.102)
N3: (-56.890,-98.973,-15.491)
N6: (-54.100,-101.761,-14.310)
N7: (-57.208,-102.217,-14.238)
N9: (-58.547,-100.588,-14.981)
O5': (-62.104,-102.453,-13.510)
O3': (-62.973,-100.412,-16.700)
OP2: (-62.072,-104.852,-12.974)
C3': (-61.838,-100.752,-15.927)
C1': (-59.778,-99.822,-15.153)
C5': (-62.696,-101.169,-13.555)
O4': (-60.604,-100.100,-14.067)
C8: (-58.436,-101.807,-14.429)
O2': (-60.834,-98.870,-17.045)
C6: (-55.066,-100.924,-14.668)
C5: (-56.446,-101.144,-14.636)
C4: (-57.271,-100.141,-15.051)
P: (-62.946,-103.717,-13.133)
C4': (-61.960,-100.261,-14.507)
C2': (-60.548,-100.104,-16.430)
C2: (-55.585,-98.883,-15.470)
N1: (-54.670,-99.757,-15.102)
N3: (-56.890,-98.973,-15.491)
N6: (-54.100,-101.761,-14.310)
N7: (-57.208,-102.217,-14.238)
N9: (-58.547,-100.588,-14.981)
O5': (-62.104,-102.453,-13.510)
O3': (-62.973,-100.412,-16.700)
Image (generated by PyMOL):