ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:02088:02104

Extra

PDB:
ATOM 1 O3' C A2087 129.857 112.772 32.893 1.00 91.91 O
ATOM 2 P U A2088 129.191 114.241 32.886 1.00 90.20 P
ATOM 3 OP1 U A2088 130.049 115.158 32.089 1.00 90.18 O
ATOM 4 OP2 U A2088 128.849 114.598 34.288 1.00 90.15 O
ATOM 5 O5' U A2088 127.849 114.039 32.059 1.00 87.79 O
ATOM 6 C5' U A2088 127.891 113.618 30.686 1.00 84.44 C
ATOM 7 C4' U A2088 126.509 113.666 30.089 1.00 82.53 C
ATOM 8 O4' U A2088 125.636 112.776 30.844 1.00 82.97 O
ATOM 9 C3' U A2088 125.833 115.033 30.118 1.00 80.83 C
ATOM 10 O3' U A2088 124.967 115.082 28.992 1.00 78.90 O
ATOM 11 C2' U A2088 125.048 114.974 31.426 1.00 80.55 C
ATOM 12 O2' U A2088 123.953 115.855 31.516 1.00 77.88 O
ATOM 13 C1' U A2088 124.572 113.523 31.411 1.00 82.60 C
ATOM 14 N1 U A2088 124.248 112.972 32.738 1.00 83.53 N
ATOM 15 C2 U A2088 122.938 112.583 32.971 1.00 83.12 C
ATOM 16 O2 U A2088 122.058 112.660 32.128 1.00 82.28 O
ATOM 17 N3 U A2088 122.696 112.096 34.230 1.00 83.83 N
ATOM 18 C4 U A2088 123.605 111.954 35.257 1.00 85.10 C
ATOM 19 O4 U A2088 123.223 111.527 36.348 1.00 85.81 O
ATOM 20 C5 U A2088 124.937 112.364 34.937 1.00 84.61 C
ATOM 21 C6 U A2088 125.207 112.847 33.722 1.00 83.89 C
ATOM 22 P C A2089 124.372 116.483 28.480 1.00 78.58 P
ATOM 23 OP1 C A2089 125.256 117.004 27.414 1.00 79.28 O
ATOM 24 OP2 C A2089 124.074 117.335 29.659 1.00 78.46 O
ATOM 25 O5' C A2089 123.007 116.019 27.800 1.00 78.12 O
TER

ATOM 1 O3' G B2103 121.015 111.344 41.020 1.00 75.94 O
ATOM 2 P A B2104 121.855 109.985 40.929 1.00 76.60 P
ATOM 3 OP1 A B2104 121.283 109.033 41.921 1.00 76.56 O
ATOM 4 OP2 A B2104 123.297 110.348 41.009 1.00 78.25 O
ATOM 5 O5' A B2104 121.530 109.448 39.463 1.00 74.56 O
ATOM 6 C5' A B2104 120.607 108.358 39.253 1.00 71.39 C
ATOM 7 C4' A B2104 119.184 108.873 39.208 1.00 69.51 C
ATOM 8 O4' A B2104 119.107 110.028 38.325 1.00 68.10 O
ATOM 9 C3' A B2104 118.149 107.879 38.691 1.00 68.39 C
ATOM 10 O3' A B2104 116.883 108.163 39.291 1.00 69.65 O
ATOM 11 C2' A B2104 118.083 108.253 37.217 1.00 67.43 C
ATOM 12 O2' A B2104 116.897 107.849 36.580 1.00 68.08 O
ATOM 13 C1' A B2104 118.170 109.775 37.300 1.00 67.39 C
ATOM 14 N9 A B2104 118.638 110.404 36.068 1.00 68.14 N
ATOM 15 C8 A B2104 119.919 110.760 35.732 1.00 68.85 C
ATOM 16 N7 A B2104 120.031 111.250 34.523 1.00 69.56 N
ATOM 17 C5 A B2104 118.735 111.229 34.033 1.00 68.77 C
ATOM 18 C6 A B2104 118.187 111.603 32.796 1.00 68.27 C
ATOM 19 N6 A B2104 118.910 112.061 31.777 1.00 68.72 N
ATOM 20 N1 A B2104 116.853 111.475 32.635 1.00 68.96 N
ATOM 21 C2 A B2104 116.130 110.985 33.650 1.00 68.22 C
ATOM 22 N3 A B2104 116.532 110.583 34.853 1.00 68.10 N
ATOM 23 C4 A B2104 117.862 110.731 34.982 1.00 68.67 C
ATOM 24 P C B2105 116.135 107.056 40.195 1.00 68.65 P
ATOM 25 OP1 C B2105 116.961 105.819 40.267 1.00 66.71 O
ATOM 26 OP2 C B2105 114.734 106.963 39.705 1.00 67.72 O
ATOM 27 O5' C B2105 116.094 107.755 41.632 1.00 67.31 O
TER

Atoms:
C4: (123.605,111.954,35.257)
N3: (122.696,112.096,34.230)
OP1: (130.049,115.158,32.089)
OP2: (128.849,114.598,34.288)
C2: (122.938,112.583,32.971)
C1': (124.572,113.523,31.411)
C3': (125.833,115.033,30.118)
O5': (127.849,114.039,32.059)
O4': (125.636,112.776,30.844)
C5': (127.891,113.618,30.686)
P: (129.191,114.241,32.886)
C4': (126.509,113.666,30.089)
C2': (125.048,114.974,31.426)
O2': (123.953,115.855,31.516)
N1: (124.248,112.972,32.738)
O4: (123.223,111.527,36.348)
O2: (122.058,112.660,32.128)
C6: (125.207,112.847,33.722)
C5: (124.937,112.364,34.937)
O3': (124.967,115.082,28.992)
OP1: (121.283,109.033,41.921)
OP2: (123.297,110.348,41.009)
C3': (118.149,107.879,38.691)
C1': (118.170,109.775,37.300)
C5': (120.607,108.358,39.253)
O4': (119.107,110.028,38.325)
C8: (119.919,110.760,35.732)
O2': (116.897,107.849,36.580)
C6: (118.187,111.603,32.796)
C5: (118.735,111.229,34.033)
C4: (117.862,110.731,34.982)
P: (121.855,109.985,40.929)
C4': (119.184,108.873,39.208)
C2': (118.083,108.253,37.217)
C2: (116.130,110.985,33.650)
N1: (116.853,111.475,32.635)
N3: (116.532,110.583,34.853)
N6: (118.910,112.061,31.777)
N7: (120.031,111.250,34.523)
N9: (118.638,110.404,36.068)
O5': (121.530,109.448,39.463)
O3': (116.883,108.163,39.291)
Image (generated by PyMOL):
PyMOL image
show in jmol