Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:978:9102
Extra
PDB:
ATOM 1 O3' G A 77 38.907 65.957 122.854 1.00 49.84 O
ATOM 2 P U A 78 39.113 67.486 122.402 1.00 49.80 P
ATOM 3 OP1 U A 78 38.081 68.346 123.046 1.00 47.75 O
ATOM 4 OP2 U A 78 39.258 67.496 120.921 1.00 47.77 O
ATOM 5 O5' U A 78 40.530 67.856 123.024 1.00 48.87 O
ATOM 6 C5' U A 78 40.729 67.929 124.447 1.00 46.68 C
ATOM 7 C4' U A 78 42.116 67.457 124.789 1.00 46.27 C
ATOM 8 O4' U A 78 42.198 66.024 124.592 1.00 48.42 O
ATOM 9 C3' U A 78 43.198 68.018 123.888 1.00 47.47 C
ATOM 10 O3' U A 78 43.608 69.309 124.318 1.00 48.31 O
ATOM 11 C2' U A 78 44.297 66.967 123.988 1.00 46.75 C
ATOM 12 O2' U A 78 45.079 67.090 125.156 1.00 46.84 O
ATOM 13 C1' U A 78 43.473 65.679 124.070 1.00 45.87 C
ATOM 14 N1 U A 78 43.275 64.974 122.792 1.00 45.34 N
ATOM 15 C2 U A 78 44.400 64.523 122.100 1.00 44.90 C
ATOM 16 O2 U A 78 45.547 64.710 122.484 1.00 43.28 O
ATOM 17 N3 U A 78 44.129 63.844 120.939 1.00 43.49 N
ATOM 18 C4 U A 78 42.886 63.571 120.401 1.00 44.75 C
ATOM 19 O4 U A 78 42.805 62.898 119.365 1.00 45.05 O
ATOM 20 C5 U A 78 41.783 64.081 121.160 1.00 44.42 C
ATOM 21 C6 U A 78 42.008 64.748 122.296 1.00 43.76 C
ATOM 22 P A A 79 43.814 70.477 123.234 1.00 48.67 P
ATOM 23 OP1 A A 79 44.284 71.674 123.975 1.00 46.67 O
ATOM 24 OP2 A A 79 42.572 70.566 122.413 1.00 47.89 O
ATOM 25 O5' A A 79 45.005 69.932 122.321 1.00 46.85 O
TER
ATOM 1 O3' G B 101 41.772 60.778 113.683 1.00 40.46 O
ATOM 2 P A B 102 41.629 59.693 114.858 1.00 39.37 P
ATOM 3 OP1 A B 102 42.242 58.431 114.368 1.00 33.61 O
ATOM 4 OP2 A B 102 40.212 59.701 115.314 1.00 39.40 O
ATOM 5 O5' A B 102 42.514 60.296 116.035 1.00 36.54 O
ATOM 6 C5' A B 102 43.800 59.751 116.328 1.00 38.62 C
ATOM 7 C4' A B 102 44.853 60.373 115.442 1.00 39.31 C
ATOM 8 O4' A B 102 44.906 61.809 115.654 1.00 40.34 O
ATOM 9 C3' A B 102 46.253 59.899 115.770 1.00 41.34 C
ATOM 10 O3' A B 102 46.540 58.670 115.136 1.00 42.79 O
ATOM 11 C2' A B 102 47.119 61.046 115.286 1.00 40.68 C
ATOM 12 O2' A B 102 47.285 61.027 113.882 1.00 42.49 O
ATOM 13 C1' A B 102 46.259 62.241 115.693 1.00 39.65 C
ATOM 14 N9 A B 102 46.532 62.711 117.051 1.00 39.96 N
ATOM 15 C8 A B 102 45.647 62.759 118.098 1.00 39.87 C
ATOM 16 N7 A B 102 46.155 63.251 119.196 1.00 41.00 N
ATOM 17 C5 A B 102 47.466 63.543 118.856 1.00 39.71 C
ATOM 18 C6 A B 102 48.523 64.095 119.584 1.00 40.05 C
ATOM 19 N6 A B 102 48.423 64.471 120.860 1.00 40.35 N
ATOM 20 N1 A B 102 49.704 64.254 118.952 1.00 42.45 N
ATOM 21 C2 A B 102 49.800 63.885 117.672 1.00 40.90 C
ATOM 22 N3 A B 102 48.877 63.358 116.880 1.00 42.35 N
ATOM 23 C4 A B 102 47.716 63.209 117.541 1.00 40.54 C
ATOM 24 P A B 103 47.263 57.517 115.969 1.00 42.02 P
ATOM 25 OP1 A B 103 47.582 56.422 115.021 1.00 43.20 O
ATOM 26 OP2 A B 103 46.437 57.239 117.170 1.00 45.15 O
ATOM 27 O5' A B 103 48.609 58.205 116.459 1.00 42.80 O
TER
ATOM 2 P U A 78 39.113 67.486 122.402 1.00 49.80 P
ATOM 3 OP1 U A 78 38.081 68.346 123.046 1.00 47.75 O
ATOM 4 OP2 U A 78 39.258 67.496 120.921 1.00 47.77 O
ATOM 5 O5' U A 78 40.530 67.856 123.024 1.00 48.87 O
ATOM 6 C5' U A 78 40.729 67.929 124.447 1.00 46.68 C
ATOM 7 C4' U A 78 42.116 67.457 124.789 1.00 46.27 C
ATOM 8 O4' U A 78 42.198 66.024 124.592 1.00 48.42 O
ATOM 9 C3' U A 78 43.198 68.018 123.888 1.00 47.47 C
ATOM 10 O3' U A 78 43.608 69.309 124.318 1.00 48.31 O
ATOM 11 C2' U A 78 44.297 66.967 123.988 1.00 46.75 C
ATOM 12 O2' U A 78 45.079 67.090 125.156 1.00 46.84 O
ATOM 13 C1' U A 78 43.473 65.679 124.070 1.00 45.87 C
ATOM 14 N1 U A 78 43.275 64.974 122.792 1.00 45.34 N
ATOM 15 C2 U A 78 44.400 64.523 122.100 1.00 44.90 C
ATOM 16 O2 U A 78 45.547 64.710 122.484 1.00 43.28 O
ATOM 17 N3 U A 78 44.129 63.844 120.939 1.00 43.49 N
ATOM 18 C4 U A 78 42.886 63.571 120.401 1.00 44.75 C
ATOM 19 O4 U A 78 42.805 62.898 119.365 1.00 45.05 O
ATOM 20 C5 U A 78 41.783 64.081 121.160 1.00 44.42 C
ATOM 21 C6 U A 78 42.008 64.748 122.296 1.00 43.76 C
ATOM 22 P A A 79 43.814 70.477 123.234 1.00 48.67 P
ATOM 23 OP1 A A 79 44.284 71.674 123.975 1.00 46.67 O
ATOM 24 OP2 A A 79 42.572 70.566 122.413 1.00 47.89 O
ATOM 25 O5' A A 79 45.005 69.932 122.321 1.00 46.85 O
TER
ATOM 1 O3' G B 101 41.772 60.778 113.683 1.00 40.46 O
ATOM 2 P A B 102 41.629 59.693 114.858 1.00 39.37 P
ATOM 3 OP1 A B 102 42.242 58.431 114.368 1.00 33.61 O
ATOM 4 OP2 A B 102 40.212 59.701 115.314 1.00 39.40 O
ATOM 5 O5' A B 102 42.514 60.296 116.035 1.00 36.54 O
ATOM 6 C5' A B 102 43.800 59.751 116.328 1.00 38.62 C
ATOM 7 C4' A B 102 44.853 60.373 115.442 1.00 39.31 C
ATOM 8 O4' A B 102 44.906 61.809 115.654 1.00 40.34 O
ATOM 9 C3' A B 102 46.253 59.899 115.770 1.00 41.34 C
ATOM 10 O3' A B 102 46.540 58.670 115.136 1.00 42.79 O
ATOM 11 C2' A B 102 47.119 61.046 115.286 1.00 40.68 C
ATOM 12 O2' A B 102 47.285 61.027 113.882 1.00 42.49 O
ATOM 13 C1' A B 102 46.259 62.241 115.693 1.00 39.65 C
ATOM 14 N9 A B 102 46.532 62.711 117.051 1.00 39.96 N
ATOM 15 C8 A B 102 45.647 62.759 118.098 1.00 39.87 C
ATOM 16 N7 A B 102 46.155 63.251 119.196 1.00 41.00 N
ATOM 17 C5 A B 102 47.466 63.543 118.856 1.00 39.71 C
ATOM 18 C6 A B 102 48.523 64.095 119.584 1.00 40.05 C
ATOM 19 N6 A B 102 48.423 64.471 120.860 1.00 40.35 N
ATOM 20 N1 A B 102 49.704 64.254 118.952 1.00 42.45 N
ATOM 21 C2 A B 102 49.800 63.885 117.672 1.00 40.90 C
ATOM 22 N3 A B 102 48.877 63.358 116.880 1.00 42.35 N
ATOM 23 C4 A B 102 47.716 63.209 117.541 1.00 40.54 C
ATOM 24 P A B 103 47.263 57.517 115.969 1.00 42.02 P
ATOM 25 OP1 A B 103 47.582 56.422 115.021 1.00 43.20 O
ATOM 26 OP2 A B 103 46.437 57.239 117.170 1.00 45.15 O
ATOM 27 O5' A B 103 48.609 58.205 116.459 1.00 42.80 O
TER
Atoms:
C4: (42.886,63.571,120.401)
N3: (44.129,63.844,120.939)
OP1: (38.081,68.346,123.046)
OP2: (39.258,67.496,120.921)
C2: (44.400,64.523,122.100)
C1': (43.473,65.679,124.070)
C3': (43.198,68.018,123.888)
O5': (40.530,67.856,123.024)
O4': (42.198,66.024,124.592)
C5': (40.729,67.929,124.447)
P: (39.113,67.486,122.402)
C4': (42.116,67.457,124.789)
C2': (44.297,66.967,123.988)
O2': (45.079,67.090,125.156)
N1: (43.275,64.974,122.792)
O4: (42.805,62.898,119.365)
O2: (45.547,64.710,122.484)
C6: (42.008,64.748,122.296)
C5: (41.783,64.081,121.160)
O3': (43.608,69.309,124.318)
N3: (44.129,63.844,120.939)
OP1: (38.081,68.346,123.046)
OP2: (39.258,67.496,120.921)
C2: (44.400,64.523,122.100)
C1': (43.473,65.679,124.070)
C3': (43.198,68.018,123.888)
O5': (40.530,67.856,123.024)
O4': (42.198,66.024,124.592)
C5': (40.729,67.929,124.447)
P: (39.113,67.486,122.402)
C4': (42.116,67.457,124.789)
C2': (44.297,66.967,123.988)
O2': (45.079,67.090,125.156)
N1: (43.275,64.974,122.792)
O4: (42.805,62.898,119.365)
O2: (45.547,64.710,122.484)
C6: (42.008,64.748,122.296)
C5: (41.783,64.081,121.160)
O3': (43.608,69.309,124.318)
OP1: (42.242,58.431,114.368)
OP2: (40.212,59.701,115.314)
C3': (46.253,59.899,115.770)
C1': (46.259,62.241,115.693)
C5': (43.800,59.751,116.328)
O4': (44.906,61.809,115.654)
C8: (45.647,62.759,118.098)
O2': (47.285,61.027,113.882)
C6: (48.523,64.095,119.584)
C5: (47.466,63.543,118.856)
C4: (47.716,63.209,117.541)
P: (41.629,59.693,114.858)
C4': (44.853,60.373,115.442)
C2': (47.119,61.046,115.286)
C2: (49.800,63.885,117.672)
N1: (49.704,64.254,118.952)
N3: (48.877,63.358,116.880)
N6: (48.423,64.471,120.860)
N7: (46.155,63.251,119.196)
N9: (46.532,62.711,117.051)
O5': (42.514,60.296,116.035)
O3': (46.540,58.670,115.136)
OP2: (40.212,59.701,115.314)
C3': (46.253,59.899,115.770)
C1': (46.259,62.241,115.693)
C5': (43.800,59.751,116.328)
O4': (44.906,61.809,115.654)
C8: (45.647,62.759,118.098)
O2': (47.285,61.027,113.882)
C6: (48.523,64.095,119.584)
C5: (47.466,63.543,118.856)
C4: (47.716,63.209,117.541)
P: (41.629,59.693,114.858)
C4': (44.853,60.373,115.442)
C2': (47.119,61.046,115.286)
C2: (49.800,63.885,117.672)
N1: (49.704,64.254,118.952)
N3: (48.877,63.358,116.880)
N6: (48.423,64.471,120.860)
N7: (46.155,63.251,119.196)
N9: (46.532,62.711,117.051)
O5': (42.514,60.296,116.035)
O3': (46.540,58.670,115.136)
Image (generated by PyMOL):