Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1547:A1627
Extra
PDB:
ATOM 1 O3' A A1546 -16.279 -24.129 2.524 1.00 8.49 O
ATOM 2 P U A1547 -16.740 -22.617 2.919 1.00 0.47 P
ATOM 3 OP1 U A1547 -17.205 -21.958 1.679 1.00 0.47 O
ATOM 4 OP2 U A1547 -15.633 -21.992 3.686 1.00 0.47 O
ATOM 5 O5' U A1547 -17.969 -22.872 3.891 1.00 0.47 O
ATOM 6 C5' U A1547 -17.753 -22.995 5.293 1.00 0.47 C
ATOM 7 C4' U A1547 -18.507 -24.156 5.880 1.00 0.47 C
ATOM 8 O4' U A1547 -19.314 -24.773 4.855 1.00 0.47 O
ATOM 9 C3' U A1547 -17.643 -25.265 6.467 1.00 0.47 C
ATOM 10 O3' U A1547 -18.182 -25.658 7.701 1.00 0.47 O
ATOM 11 C2' U A1547 -17.779 -26.415 5.479 1.00 0.47 C
ATOM 12 O2' U A1547 -17.694 -27.700 6.073 1.00 0.47 O
ATOM 13 C1' U A1547 -19.157 -26.168 4.915 1.00 0.47 C
ATOM 14 N1 U A1547 -19.345 -26.707 3.584 1.00 0.33 N
ATOM 15 C2 U A1547 -20.056 -27.886 3.563 1.00 0.33 C
ATOM 16 O2 U A1547 -20.488 -28.426 4.567 1.00 0.33 O
ATOM 17 N3 U A1547 -20.260 -28.412 2.334 1.00 0.33 N
ATOM 18 C4 U A1547 -19.853 -27.884 1.144 1.00 0.33 C
ATOM 19 O4 U A1547 -20.136 -28.528 0.119 1.00 0.33 O
ATOM 20 C5 U A1547 -19.119 -26.634 1.264 1.00 0.33 C
ATOM 21 C6 U A1547 -18.888 -26.087 2.461 1.00 0.33 C
ATOM 22 P G A1548 -17.732 -24.891 9.021 1.00 14.86 P
ATOM 23 OP1 G A1548 -18.963 -24.290 9.614 1.00 14.86 O
ATOM 24 OP2 G A1548 -16.615 -23.984 8.633 1.00 14.86 O
ATOM 25 O5' G A1548 -17.188 -26.092 9.934 1.00 14.86 O
TER
ATOM 1 O3' G B1626 -20.952 -30.643 -3.418 1.00 0.27 O
ATOM 2 P A B1627 -19.762 -31.674 -3.186 1.00 0.01 P
ATOM 3 OP1 A B1627 -18.652 -30.919 -2.554 1.00 0.01 O
ATOM 4 OP2 A B1627 -19.520 -32.388 -4.460 1.00 0.01 O
ATOM 5 O5' A B1627 -20.403 -32.648 -2.117 1.00 0.01 O
ATOM 6 C5' A B1627 -20.779 -33.960 -2.457 1.00 0.01 C
ATOM 7 C4' A B1627 -21.864 -34.468 -1.562 1.00 0.01 C
ATOM 8 O4' A B1627 -21.690 -33.933 -0.220 1.00 0.01 O
ATOM 9 C3' A B1627 -23.275 -34.094 -1.981 1.00 0.01 C
ATOM 10 O3' A B1627 -24.123 -35.186 -1.711 1.00 0.01 O
ATOM 11 C2' A B1627 -23.609 -32.947 -1.037 1.00 0.01 C
ATOM 12 O2' A B1627 -24.987 -32.723 -0.820 1.00 0.01 O
ATOM 13 C1' A B1627 -22.926 -33.430 0.215 1.00 0.01 C
ATOM 14 N9 A B1627 -22.715 -32.395 1.203 1.00 0.01 N
ATOM 15 C8 A B1627 -21.896 -31.324 1.178 1.00 0.01 C
ATOM 16 N7 A B1627 -22.010 -30.589 2.244 1.00 0.01 N
ATOM 17 C5 A B1627 -22.977 -31.210 2.991 1.00 0.01 C
ATOM 18 C6 A B1627 -23.534 -30.917 4.219 1.00 0.01 C
ATOM 19 N6 A B1627 -23.147 -29.849 4.909 1.00 0.01 N
ATOM 20 N1 A B1627 -24.491 -31.732 4.705 1.00 0.01 N
ATOM 21 C2 A B1627 -24.854 -32.784 3.992 1.00 0.01 C
ATOM 22 N3 A B1627 -24.393 -33.175 2.818 1.00 0.01 N
ATOM 23 C4 A B1627 -23.440 -32.325 2.363 1.00 0.01 C
ATOM 24 P A B1628 -24.234 -36.371 -2.751 1.00 0.01 P
ATOM 25 OP1 A B1628 -24.885 -37.494 -2.068 1.00 0.01 O
ATOM 26 OP2 A B1628 -22.911 -36.574 -3.322 1.00 0.01 O
ATOM 27 O5' A B1628 -25.199 -35.761 -3.837 1.00 0.01 O
TER
ATOM 2 P U A1547 -16.740 -22.617 2.919 1.00 0.47 P
ATOM 3 OP1 U A1547 -17.205 -21.958 1.679 1.00 0.47 O
ATOM 4 OP2 U A1547 -15.633 -21.992 3.686 1.00 0.47 O
ATOM 5 O5' U A1547 -17.969 -22.872 3.891 1.00 0.47 O
ATOM 6 C5' U A1547 -17.753 -22.995 5.293 1.00 0.47 C
ATOM 7 C4' U A1547 -18.507 -24.156 5.880 1.00 0.47 C
ATOM 8 O4' U A1547 -19.314 -24.773 4.855 1.00 0.47 O
ATOM 9 C3' U A1547 -17.643 -25.265 6.467 1.00 0.47 C
ATOM 10 O3' U A1547 -18.182 -25.658 7.701 1.00 0.47 O
ATOM 11 C2' U A1547 -17.779 -26.415 5.479 1.00 0.47 C
ATOM 12 O2' U A1547 -17.694 -27.700 6.073 1.00 0.47 O
ATOM 13 C1' U A1547 -19.157 -26.168 4.915 1.00 0.47 C
ATOM 14 N1 U A1547 -19.345 -26.707 3.584 1.00 0.33 N
ATOM 15 C2 U A1547 -20.056 -27.886 3.563 1.00 0.33 C
ATOM 16 O2 U A1547 -20.488 -28.426 4.567 1.00 0.33 O
ATOM 17 N3 U A1547 -20.260 -28.412 2.334 1.00 0.33 N
ATOM 18 C4 U A1547 -19.853 -27.884 1.144 1.00 0.33 C
ATOM 19 O4 U A1547 -20.136 -28.528 0.119 1.00 0.33 O
ATOM 20 C5 U A1547 -19.119 -26.634 1.264 1.00 0.33 C
ATOM 21 C6 U A1547 -18.888 -26.087 2.461 1.00 0.33 C
ATOM 22 P G A1548 -17.732 -24.891 9.021 1.00 14.86 P
ATOM 23 OP1 G A1548 -18.963 -24.290 9.614 1.00 14.86 O
ATOM 24 OP2 G A1548 -16.615 -23.984 8.633 1.00 14.86 O
ATOM 25 O5' G A1548 -17.188 -26.092 9.934 1.00 14.86 O
TER
ATOM 1 O3' G B1626 -20.952 -30.643 -3.418 1.00 0.27 O
ATOM 2 P A B1627 -19.762 -31.674 -3.186 1.00 0.01 P
ATOM 3 OP1 A B1627 -18.652 -30.919 -2.554 1.00 0.01 O
ATOM 4 OP2 A B1627 -19.520 -32.388 -4.460 1.00 0.01 O
ATOM 5 O5' A B1627 -20.403 -32.648 -2.117 1.00 0.01 O
ATOM 6 C5' A B1627 -20.779 -33.960 -2.457 1.00 0.01 C
ATOM 7 C4' A B1627 -21.864 -34.468 -1.562 1.00 0.01 C
ATOM 8 O4' A B1627 -21.690 -33.933 -0.220 1.00 0.01 O
ATOM 9 C3' A B1627 -23.275 -34.094 -1.981 1.00 0.01 C
ATOM 10 O3' A B1627 -24.123 -35.186 -1.711 1.00 0.01 O
ATOM 11 C2' A B1627 -23.609 -32.947 -1.037 1.00 0.01 C
ATOM 12 O2' A B1627 -24.987 -32.723 -0.820 1.00 0.01 O
ATOM 13 C1' A B1627 -22.926 -33.430 0.215 1.00 0.01 C
ATOM 14 N9 A B1627 -22.715 -32.395 1.203 1.00 0.01 N
ATOM 15 C8 A B1627 -21.896 -31.324 1.178 1.00 0.01 C
ATOM 16 N7 A B1627 -22.010 -30.589 2.244 1.00 0.01 N
ATOM 17 C5 A B1627 -22.977 -31.210 2.991 1.00 0.01 C
ATOM 18 C6 A B1627 -23.534 -30.917 4.219 1.00 0.01 C
ATOM 19 N6 A B1627 -23.147 -29.849 4.909 1.00 0.01 N
ATOM 20 N1 A B1627 -24.491 -31.732 4.705 1.00 0.01 N
ATOM 21 C2 A B1627 -24.854 -32.784 3.992 1.00 0.01 C
ATOM 22 N3 A B1627 -24.393 -33.175 2.818 1.00 0.01 N
ATOM 23 C4 A B1627 -23.440 -32.325 2.363 1.00 0.01 C
ATOM 24 P A B1628 -24.234 -36.371 -2.751 1.00 0.01 P
ATOM 25 OP1 A B1628 -24.885 -37.494 -2.068 1.00 0.01 O
ATOM 26 OP2 A B1628 -22.911 -36.574 -3.322 1.00 0.01 O
ATOM 27 O5' A B1628 -25.199 -35.761 -3.837 1.00 0.01 O
TER
Atoms:
C4: (-19.853,-27.884,1.144)
N3: (-20.260,-28.412,2.334)
OP1: (-17.205,-21.958,1.679)
OP2: (-15.633,-21.992,3.686)
C2: (-20.056,-27.886,3.563)
C1': (-19.157,-26.168,4.915)
C3': (-17.643,-25.265,6.467)
O5': (-17.969,-22.872,3.891)
O4': (-19.314,-24.773,4.855)
C5': (-17.753,-22.995,5.293)
P: (-16.740,-22.617,2.919)
C4': (-18.507,-24.156,5.880)
C2': (-17.779,-26.415,5.479)
O2': (-17.694,-27.700,6.073)
N1: (-19.345,-26.707,3.584)
O4: (-20.136,-28.528,0.119)
O2: (-20.488,-28.426,4.567)
C6: (-18.888,-26.087,2.461)
C5: (-19.119,-26.634,1.264)
O3': (-18.182,-25.658,7.701)
N3: (-20.260,-28.412,2.334)
OP1: (-17.205,-21.958,1.679)
OP2: (-15.633,-21.992,3.686)
C2: (-20.056,-27.886,3.563)
C1': (-19.157,-26.168,4.915)
C3': (-17.643,-25.265,6.467)
O5': (-17.969,-22.872,3.891)
O4': (-19.314,-24.773,4.855)
C5': (-17.753,-22.995,5.293)
P: (-16.740,-22.617,2.919)
C4': (-18.507,-24.156,5.880)
C2': (-17.779,-26.415,5.479)
O2': (-17.694,-27.700,6.073)
N1: (-19.345,-26.707,3.584)
O4: (-20.136,-28.528,0.119)
O2: (-20.488,-28.426,4.567)
C6: (-18.888,-26.087,2.461)
C5: (-19.119,-26.634,1.264)
O3': (-18.182,-25.658,7.701)
OP1: (-18.652,-30.919,-2.554)
OP2: (-19.520,-32.388,-4.460)
C3': (-23.275,-34.094,-1.981)
C1': (-22.926,-33.430,0.215)
C5': (-20.779,-33.960,-2.457)
O4': (-21.690,-33.933,-0.220)
C8: (-21.896,-31.324,1.178)
O2': (-24.987,-32.723,-0.820)
C6: (-23.534,-30.917,4.219)
C5: (-22.977,-31.210,2.991)
C4: (-23.440,-32.325,2.363)
P: (-19.762,-31.674,-3.186)
C4': (-21.864,-34.468,-1.562)
C2': (-23.609,-32.947,-1.037)
C2: (-24.854,-32.784,3.992)
N1: (-24.491,-31.732,4.705)
N3: (-24.393,-33.175,2.818)
N6: (-23.147,-29.849,4.909)
N7: (-22.010,-30.589,2.244)
N9: (-22.715,-32.395,1.203)
O5': (-20.403,-32.648,-2.117)
O3': (-24.123,-35.186,-1.711)
OP2: (-19.520,-32.388,-4.460)
C3': (-23.275,-34.094,-1.981)
C1': (-22.926,-33.430,0.215)
C5': (-20.779,-33.960,-2.457)
O4': (-21.690,-33.933,-0.220)
C8: (-21.896,-31.324,1.178)
O2': (-24.987,-32.723,-0.820)
C6: (-23.534,-30.917,4.219)
C5: (-22.977,-31.210,2.991)
C4: (-23.440,-32.325,2.363)
P: (-19.762,-31.674,-3.186)
C4': (-21.864,-34.468,-1.562)
C2': (-23.609,-32.947,-1.037)
C2: (-24.854,-32.784,3.992)
N1: (-24.491,-31.732,4.705)
N3: (-24.393,-33.175,2.818)
N6: (-23.147,-29.849,4.909)
N7: (-22.010,-30.589,2.244)
N9: (-22.715,-32.395,1.203)
O5': (-20.403,-32.648,-2.117)
O3': (-24.123,-35.186,-1.711)
Image (generated by PyMOL):