ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A1597:A1438

Extra

PDB:
ATOM 1 O3' C A1596 -10.472 -9.673 46.317 1.00 76.62 O
ATOM 2 P U A1597 -8.931 -9.787 46.683 1.00 82.46 P
ATOM 3 OP1 U A1597 -8.313 -8.467 46.394 1.00 74.14 O
ATOM 4 OP2 U A1597 -8.419 -11.007 46.009 1.00 81.90 O
ATOM 5 O5' U A1597 -8.921 -10.118 48.254 1.00 62.67 O
ATOM 6 C5' U A1597 -9.496 -9.276 49.229 1.00 69.24 C
ATOM 7 C4' U A1597 -10.826 -9.854 49.663 1.00 70.26 C
ATOM 8 O4' U A1597 -11.314 -10.698 48.592 1.00 65.05 O
ATOM 9 C3' U A1597 -10.864 -10.810 50.851 1.00 66.64 C
ATOM 10 O3' U A1597 -10.750 -10.164 52.143 1.00 77.69 O
ATOM 11 C2' U A1597 -12.275 -11.342 50.639 1.00 64.39 C
ATOM 12 O2' U A1597 -13.266 -10.458 51.117 1.00 78.29 O
ATOM 13 C1' U A1597 -12.358 -11.483 49.121 1.00 62.33 C
ATOM 14 N1 U A1597 -12.149 -12.890 48.786 1.00 61.54 N
ATOM 15 C2 U A1597 -13.051 -13.799 49.288 1.00 65.58 C
ATOM 16 O2 U A1597 -14.011 -13.474 49.965 1.00 65.43 O
ATOM 17 N3 U A1597 -12.800 -15.109 48.964 1.00 62.91 N
ATOM 18 C4 U A1597 -11.750 -15.592 48.211 1.00 64.42 C
ATOM 19 O4 U A1597 -11.660 -16.806 48.011 1.00 72.75 O
ATOM 20 C5 U A1597 -10.847 -14.570 47.732 1.00 59.20 C
ATOM 21 C6 U A1597 -11.070 -13.283 48.031 1.00 61.06 C
ATOM 22 P A A1598 -10.355 -10.951 53.505 1.00 88.02 P
ATOM 23 OP1 A A1598 -9.330 -10.159 54.221 1.00 96.83 O
ATOM 24 OP2 A A1598 -10.052 -12.355 53.155 1.00 83.88 O
ATOM 25 O5' A A1598 -11.693 -10.957 54.382 1.00 76.41 O
TER

ATOM 1 O3' G B1437 -10.224 -22.026 49.662 1.00 64.33 O
ATOM 2 P A B1438 -10.704 -22.351 48.178 1.00102.37 P
ATOM 3 OP1 A B1438 -10.183 -23.671 47.776 1.00112.60 O
ATOM 4 OP2 A B1438 -10.435 -21.164 47.342 1.00 93.18 O
ATOM 5 O5' A B1438 -12.274 -22.466 48.366 1.00 95.42 O
ATOM 6 C5' A B1438 -12.782 -23.148 49.496 1.00 95.74 C
ATOM 7 C4' A B1438 -14.152 -22.600 49.869 1.00 98.33 C
ATOM 8 O4' A B1438 -14.039 -21.216 50.288 1.00 92.72 O
ATOM 9 C3' A B1438 -15.199 -22.575 48.755 1.00 86.89 C
ATOM 10 O3' A B1438 -15.955 -23.810 48.730 1.00 80.71 O
ATOM 11 C2' A B1438 -16.080 -21.385 49.138 1.00 92.46 C
ATOM 12 O2' A B1438 -17.340 -21.814 49.602 1.00106.35 O
ATOM 13 C1' A B1438 -15.351 -20.704 50.296 1.00 86.54 C
ATOM 14 N9 A B1438 -15.354 -19.245 50.222 1.00 79.13 N
ATOM 15 C8 A B1438 -14.560 -18.436 49.462 1.00 85.08 C
ATOM 16 N7 A B1438 -14.816 -17.156 49.618 1.00 92.43 N
ATOM 17 C5 A B1438 -15.849 -17.117 50.543 1.00 88.94 C
ATOM 18 C6 A B1438 -16.579 -16.059 51.136 1.00 91.55 C
ATOM 19 N6 A B1438 -16.377 -14.762 50.879 1.00 95.89 N
ATOM 20 N1 A B1438 -17.541 -16.380 52.018 1.00 87.34 N
ATOM 21 C2 A B1438 -17.751 -17.673 52.282 1.00 94.31 C
ATOM 22 N3 A B1438 -17.137 -18.751 51.794 1.00 94.82 N
ATOM 23 C4 A B1438 -16.186 -18.401 50.920 1.00 85.99 C
ATOM 24 P U B1439 -16.458 -24.467 47.351 1.00118.44 P
ATOM 25 OP1 U B1439 -16.018 -25.876 47.290 1.00114.87 O
ATOM 26 OP2 U B1439 -16.153 -23.522 46.253 1.00101.79 O
ATOM 27 O5' U B1439 -18.032 -24.484 47.520 1.00109.22 O
TER

Atoms:
C4: (-11.750,-15.592,48.211)
N3: (-12.800,-15.109,48.964)
OP1: (-8.313,-8.467,46.394)
OP2: (-8.419,-11.007,46.009)
C2: (-13.051,-13.799,49.288)
C1': (-12.358,-11.483,49.121)
C3': (-10.864,-10.810,50.851)
O5': (-8.921,-10.118,48.254)
O4': (-11.314,-10.698,48.592)
C5': (-9.496,-9.276,49.229)
P: (-8.931,-9.787,46.683)
C4': (-10.826,-9.854,49.663)
C2': (-12.275,-11.342,50.639)
O2': (-13.266,-10.458,51.117)
N1: (-12.149,-12.890,48.786)
O4: (-11.660,-16.806,48.011)
O2: (-14.011,-13.474,49.965)
C6: (-11.070,-13.283,48.031)
C5: (-10.847,-14.570,47.732)
O3': (-10.750,-10.164,52.143)
OP1: (-10.183,-23.671,47.776)
OP2: (-10.435,-21.164,47.342)
C3': (-15.199,-22.575,48.755)
C1': (-15.351,-20.704,50.296)
C5': (-12.782,-23.148,49.496)
O4': (-14.039,-21.216,50.288)
C8: (-14.560,-18.436,49.462)
O2': (-17.340,-21.814,49.602)
C6: (-16.579,-16.059,51.136)
C5: (-15.849,-17.117,50.543)
C4: (-16.186,-18.401,50.920)
P: (-10.704,-22.351,48.178)
C4': (-14.152,-22.600,49.869)
C2': (-16.080,-21.385,49.138)
C2: (-17.751,-17.673,52.282)
N1: (-17.541,-16.380,52.018)
N3: (-17.137,-18.751,51.794)
N6: (-16.377,-14.762,50.879)
N7: (-14.816,-17.156,49.618)
N9: (-15.354,-19.245,50.222)
O5': (-12.274,-22.466,48.366)
O3': (-15.955,-23.810,48.730)
Image (generated by PyMOL):
PyMOL image
show in jmol