Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0274:0273
Extra
PDB:
ATOM 1 O3' A A 273 64.358 106.179 0.766 1.00107.34 O
ATOM 2 P U A 274 64.184 107.648 1.401 1.00104.78 P
ATOM 3 OP1 U A 274 63.554 107.496 2.737 1.00104.70 O
ATOM 4 OP2 U A 274 63.541 108.518 0.380 1.00103.59 O
ATOM 5 O5' U A 274 65.678 108.154 1.620 1.00102.33 O
ATOM 6 C5' U A 274 66.577 107.439 2.488 1.00 99.40 C
ATOM 7 C4' U A 274 68.001 107.855 2.220 1.00 97.40 C
ATOM 8 O4' U A 274 68.320 107.575 0.833 1.00 96.78 O
ATOM 9 C3' U A 274 68.283 109.340 2.377 1.00 96.82 C
ATOM 10 O3' U A 274 68.544 109.669 3.734 1.00 97.03 O
ATOM 11 C2' U A 274 69.497 109.538 1.479 1.00 96.49 C
ATOM 12 O2' U A 274 70.713 109.123 2.068 1.00 95.90 O
ATOM 13 C1' U A 274 69.161 108.597 0.319 1.00 96.12 C
ATOM 14 N1 U A 274 68.463 109.262 -0.796 1.00 94.69 N
ATOM 15 C2 U A 274 69.229 109.979 -1.701 1.00 93.62 C
ATOM 16 O2 U A 274 70.443 110.087 -1.605 1.00 92.36 O
ATOM 17 N3 U A 274 68.518 110.567 -2.720 1.00 93.35 N
ATOM 18 C4 U A 274 67.151 110.518 -2.921 1.00 93.13 C
ATOM 19 O4 U A 274 66.656 111.122 -3.874 1.00 93.07 O
ATOM 20 C5 U A 274 66.433 109.764 -1.946 1.00 93.07 C
ATOM 21 C6 U A 274 67.092 109.177 -0.943 1.00 94.04 C
ATOM 22 P C A 275 68.048 111.076 4.324 1.00 97.20 P
ATOM 23 OP1 C A 275 68.359 111.068 5.777 1.00 96.85 O
ATOM 24 OP2 C A 275 66.652 111.310 3.871 1.00 96.49 O
ATOM 25 O5' C A 275 68.996 112.147 3.623 1.00 97.52 O
TER
ATOM 1 O3' C B 272 61.866 107.630 -4.630 1.00131.79 O
ATOM 2 P A B 273 62.061 107.669 -3.039 1.00129.72 P
ATOM 3 OP1 A B 273 60.806 107.154 -2.424 1.00129.94 O
ATOM 4 OP2 A B 273 62.559 109.019 -2.670 1.00130.44 O
ATOM 5 O5' A B 273 63.237 106.622 -2.782 1.00125.58 O
ATOM 6 C5' A B 273 63.002 105.399 -2.057 1.00118.53 C
ATOM 7 C4' A B 273 64.267 104.960 -1.357 1.00113.40 C
ATOM 8 O4' A B 273 65.264 104.596 -2.350 1.00111.60 O
ATOM 9 C3' A B 273 64.952 106.031 -0.522 1.00110.63 C
ATOM 10 O3' A B 273 64.358 106.179 0.766 1.00107.34 O
ATOM 11 C2' A B 273 66.388 105.526 -0.470 1.00109.76 C
ATOM 12 O2' A B 273 66.579 104.493 0.475 1.00109.57 O
ATOM 13 C1' A B 273 66.557 104.962 -1.885 1.00109.06 C
ATOM 14 N9 A B 273 67.132 105.929 -2.826 1.00106.41 N
ATOM 15 C8 A B 273 66.485 106.662 -3.795 1.00105.40 C
ATOM 16 N7 A B 273 67.276 107.462 -4.469 1.00104.07 N
ATOM 17 C5 A B 273 68.528 107.240 -3.912 1.00103.76 C
ATOM 18 C6 A B 273 69.797 107.787 -4.182 1.00102.79 C
ATOM 19 N6 A B 273 70.023 108.710 -5.122 1.00101.58 N
ATOM 20 N1 A B 273 70.840 107.350 -3.443 1.00102.36 N
ATOM 21 C2 A B 273 70.614 106.428 -2.499 1.00102.31 C
ATOM 22 N3 A B 273 69.472 105.839 -2.151 1.00103.08 N
ATOM 23 C4 A B 273 68.455 106.294 -2.903 1.00104.40 C
ATOM 24 P U B 274 64.184 107.648 1.401 1.00104.78 P
ATOM 25 OP1 U B 274 63.554 107.496 2.737 1.00104.70 O
ATOM 26 OP2 U B 274 63.541 108.518 0.380 1.00103.59 O
ATOM 27 O5' U B 274 65.678 108.154 1.620 1.00102.33 O
TER
ATOM 2 P U A 274 64.184 107.648 1.401 1.00104.78 P
ATOM 3 OP1 U A 274 63.554 107.496 2.737 1.00104.70 O
ATOM 4 OP2 U A 274 63.541 108.518 0.380 1.00103.59 O
ATOM 5 O5' U A 274 65.678 108.154 1.620 1.00102.33 O
ATOM 6 C5' U A 274 66.577 107.439 2.488 1.00 99.40 C
ATOM 7 C4' U A 274 68.001 107.855 2.220 1.00 97.40 C
ATOM 8 O4' U A 274 68.320 107.575 0.833 1.00 96.78 O
ATOM 9 C3' U A 274 68.283 109.340 2.377 1.00 96.82 C
ATOM 10 O3' U A 274 68.544 109.669 3.734 1.00 97.03 O
ATOM 11 C2' U A 274 69.497 109.538 1.479 1.00 96.49 C
ATOM 12 O2' U A 274 70.713 109.123 2.068 1.00 95.90 O
ATOM 13 C1' U A 274 69.161 108.597 0.319 1.00 96.12 C
ATOM 14 N1 U A 274 68.463 109.262 -0.796 1.00 94.69 N
ATOM 15 C2 U A 274 69.229 109.979 -1.701 1.00 93.62 C
ATOM 16 O2 U A 274 70.443 110.087 -1.605 1.00 92.36 O
ATOM 17 N3 U A 274 68.518 110.567 -2.720 1.00 93.35 N
ATOM 18 C4 U A 274 67.151 110.518 -2.921 1.00 93.13 C
ATOM 19 O4 U A 274 66.656 111.122 -3.874 1.00 93.07 O
ATOM 20 C5 U A 274 66.433 109.764 -1.946 1.00 93.07 C
ATOM 21 C6 U A 274 67.092 109.177 -0.943 1.00 94.04 C
ATOM 22 P C A 275 68.048 111.076 4.324 1.00 97.20 P
ATOM 23 OP1 C A 275 68.359 111.068 5.777 1.00 96.85 O
ATOM 24 OP2 C A 275 66.652 111.310 3.871 1.00 96.49 O
ATOM 25 O5' C A 275 68.996 112.147 3.623 1.00 97.52 O
TER
ATOM 1 O3' C B 272 61.866 107.630 -4.630 1.00131.79 O
ATOM 2 P A B 273 62.061 107.669 -3.039 1.00129.72 P
ATOM 3 OP1 A B 273 60.806 107.154 -2.424 1.00129.94 O
ATOM 4 OP2 A B 273 62.559 109.019 -2.670 1.00130.44 O
ATOM 5 O5' A B 273 63.237 106.622 -2.782 1.00125.58 O
ATOM 6 C5' A B 273 63.002 105.399 -2.057 1.00118.53 C
ATOM 7 C4' A B 273 64.267 104.960 -1.357 1.00113.40 C
ATOM 8 O4' A B 273 65.264 104.596 -2.350 1.00111.60 O
ATOM 9 C3' A B 273 64.952 106.031 -0.522 1.00110.63 C
ATOM 10 O3' A B 273 64.358 106.179 0.766 1.00107.34 O
ATOM 11 C2' A B 273 66.388 105.526 -0.470 1.00109.76 C
ATOM 12 O2' A B 273 66.579 104.493 0.475 1.00109.57 O
ATOM 13 C1' A B 273 66.557 104.962 -1.885 1.00109.06 C
ATOM 14 N9 A B 273 67.132 105.929 -2.826 1.00106.41 N
ATOM 15 C8 A B 273 66.485 106.662 -3.795 1.00105.40 C
ATOM 16 N7 A B 273 67.276 107.462 -4.469 1.00104.07 N
ATOM 17 C5 A B 273 68.528 107.240 -3.912 1.00103.76 C
ATOM 18 C6 A B 273 69.797 107.787 -4.182 1.00102.79 C
ATOM 19 N6 A B 273 70.023 108.710 -5.122 1.00101.58 N
ATOM 20 N1 A B 273 70.840 107.350 -3.443 1.00102.36 N
ATOM 21 C2 A B 273 70.614 106.428 -2.499 1.00102.31 C
ATOM 22 N3 A B 273 69.472 105.839 -2.151 1.00103.08 N
ATOM 23 C4 A B 273 68.455 106.294 -2.903 1.00104.40 C
ATOM 24 P U B 274 64.184 107.648 1.401 1.00104.78 P
ATOM 25 OP1 U B 274 63.554 107.496 2.737 1.00104.70 O
ATOM 26 OP2 U B 274 63.541 108.518 0.380 1.00103.59 O
ATOM 27 O5' U B 274 65.678 108.154 1.620 1.00102.33 O
TER
Atoms:
C4: (67.151,110.518,-2.921)
N3: (68.518,110.567,-2.720)
OP1: (63.554,107.496,2.737)
OP2: (63.541,108.518,0.380)
C2: (69.229,109.979,-1.701)
C1': (69.161,108.597,0.319)
C3': (68.283,109.340,2.377)
O5': (65.678,108.154,1.620)
O4': (68.320,107.575,0.833)
C5': (66.577,107.439,2.488)
P: (64.184,107.648,1.401)
C4': (68.001,107.855,2.220)
C2': (69.497,109.538,1.479)
O2': (70.713,109.123,2.068)
N1: (68.463,109.262,-0.796)
O4: (66.656,111.122,-3.874)
O2: (70.443,110.087,-1.605)
C6: (67.092,109.177,-0.943)
C5: (66.433,109.764,-1.946)
O3': (68.544,109.669,3.734)
N3: (68.518,110.567,-2.720)
OP1: (63.554,107.496,2.737)
OP2: (63.541,108.518,0.380)
C2: (69.229,109.979,-1.701)
C1': (69.161,108.597,0.319)
C3': (68.283,109.340,2.377)
O5': (65.678,108.154,1.620)
O4': (68.320,107.575,0.833)
C5': (66.577,107.439,2.488)
P: (64.184,107.648,1.401)
C4': (68.001,107.855,2.220)
C2': (69.497,109.538,1.479)
O2': (70.713,109.123,2.068)
N1: (68.463,109.262,-0.796)
O4: (66.656,111.122,-3.874)
O2: (70.443,110.087,-1.605)
C6: (67.092,109.177,-0.943)
C5: (66.433,109.764,-1.946)
O3': (68.544,109.669,3.734)
OP1: (60.806,107.154,-2.424)
OP2: (62.559,109.019,-2.670)
C3': (64.952,106.031,-0.522)
C1': (66.557,104.962,-1.885)
C5': (63.002,105.399,-2.057)
O4': (65.264,104.596,-2.350)
C8: (66.485,106.662,-3.795)
O2': (66.579,104.493,0.475)
C6: (69.797,107.787,-4.182)
C5: (68.528,107.240,-3.912)
C4: (68.455,106.294,-2.903)
P: (62.061,107.669,-3.039)
C4': (64.267,104.960,-1.357)
C2': (66.388,105.526,-0.470)
C2: (70.614,106.428,-2.499)
N1: (70.840,107.350,-3.443)
N3: (69.472,105.839,-2.151)
N6: (70.023,108.710,-5.122)
N7: (67.276,107.462,-4.469)
N9: (67.132,105.929,-2.826)
O5': (63.237,106.622,-2.782)
O3': (64.358,106.179,0.766)
OP2: (62.559,109.019,-2.670)
C3': (64.952,106.031,-0.522)
C1': (66.557,104.962,-1.885)
C5': (63.002,105.399,-2.057)
O4': (65.264,104.596,-2.350)
C8: (66.485,106.662,-3.795)
O2': (66.579,104.493,0.475)
C6: (69.797,107.787,-4.182)
C5: (68.528,107.240,-3.912)
C4: (68.455,106.294,-2.903)
P: (62.061,107.669,-3.039)
C4': (64.267,104.960,-1.357)
C2': (66.388,105.526,-0.470)
C2: (70.614,106.428,-2.499)
N1: (70.840,107.350,-3.443)
N3: (69.472,105.839,-2.151)
N6: (70.023,108.710,-5.122)
N7: (67.276,107.462,-4.469)
N9: (67.132,105.929,-2.826)
O5': (63.237,106.622,-2.782)
O3': (64.358,106.179,0.766)
Image (generated by PyMOL):