ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1847:A1885

Extra

PDB:
ATOM 1 O3' G A1846 89.830 -5.592 -5.539 1.00 67.90 O
ATOM 2 P U A1847 89.815 -5.683 -3.939 1.00 55.05 P
ATOM 3 OP1 U A1847 91.222 -5.635 -3.494 1.00 75.51 O
ATOM 4 OP2 U A1847 88.990 -6.856 -3.561 1.00 61.99 O
ATOM 5 O5' U A1847 89.061 -4.352 -3.522 1.00 58.33 O
ATOM 6 C5' U A1847 89.399 -3.114 -4.111 1.00 61.08 C
ATOM 7 C4' U A1847 88.199 -2.220 -4.218 1.00 59.21 C
ATOM 8 O4' U A1847 87.606 -2.376 -5.521 1.00 68.28 O
ATOM 9 C3' U A1847 87.076 -2.508 -3.237 1.00 51.50 C
ATOM 10 O3' U A1847 87.266 -1.853 -2.006 1.00 47.69 O
ATOM 11 C2' U A1847 85.829 -2.043 -3.977 1.00 57.68 C
ATOM 12 O2' U A1847 85.629 -0.652 -3.801 1.00 57.33 O
ATOM 13 C1' U A1847 86.209 -2.285 -5.435 1.00 66.82 C
ATOM 14 N1 U A1847 85.625 -3.519 -5.998 1.00 56.96 N
ATOM 15 C2 U A1847 84.251 -3.593 -6.177 1.00 60.54 C
ATOM 16 O2 U A1847 83.463 -2.715 -5.829 1.00 64.43 O
ATOM 17 N3 U A1847 83.823 -4.759 -6.763 1.00 57.66 N
ATOM 18 C4 U A1847 84.612 -5.811 -7.193 1.00 55.45 C
ATOM 19 O4 U A1847 84.095 -6.811 -7.706 1.00 52.74 O
ATOM 20 C5 U A1847 86.011 -5.623 -6.978 1.00 51.29 C
ATOM 21 C6 U A1847 86.461 -4.512 -6.415 1.00 45.96 C
ATOM 22 P A A1848 86.887 -2.573 -0.628 1.00 65.59 P
ATOM 23 OP1 A A1848 87.497 -1.781 0.458 1.00 81.66 O
ATOM 24 OP2 A A1848 87.267 -4.010 -0.762 1.00 68.43 O
ATOM 25 O5' A A1848 85.302 -2.419 -0.566 1.00 55.95 O
TER

ATOM 1 O3' G B1884 81.838 -11.873 -8.283 1.00 26.72 O
ATOM 2 P A B1885 82.437 -12.230 -9.735 1.00 46.29 P
ATOM 3 OP1 A B1885 81.560 -13.240 -10.338 1.00 60.01 O
ATOM 4 OP2 A B1885 83.857 -12.568 -9.552 1.00 39.54 O
ATOM 5 O5' A B1885 82.288 -10.867 -10.534 1.00 36.72 O
ATOM 6 C5' A B1885 81.816 -9.690 -9.905 1.00 29.33 C
ATOM 7 C4' A B1885 80.395 -9.835 -9.452 1.00 33.59 C
ATOM 8 O4' A B1885 80.299 -9.358 -8.094 1.00 41.69 O
ATOM 9 C3' A B1885 79.343 -9.047 -10.252 1.00 40.42 C
ATOM 10 O3' A B1885 78.764 -9.816 -11.320 1.00 41.46 O
ATOM 11 C2' A B1885 78.319 -8.634 -9.200 1.00 39.74 C
ATOM 12 O2' A B1885 77.335 -9.649 -9.047 1.00 34.87 O
ATOM 13 C1' A B1885 79.157 -8.567 -7.914 1.00 42.14 C
ATOM 14 N9 A B1885 79.600 -7.193 -7.559 1.00 38.75 N
ATOM 15 C8 A B1885 80.811 -6.633 -7.851 1.00 41.75 C
ATOM 16 N7 A B1885 80.991 -5.419 -7.398 1.00 41.68 N
ATOM 17 C5 A B1885 79.821 -5.161 -6.727 1.00 41.05 C
ATOM 18 C6 A B1885 79.385 -4.037 -6.020 1.00 38.26 C
ATOM 19 N6 A B1885 80.119 -2.947 -5.878 1.00 42.65 N
ATOM 20 N1 A B1885 78.169 -4.057 -5.458 1.00 37.25 N
ATOM 21 C2 A B1885 77.443 -5.163 -5.605 1.00 41.94 C
ATOM 22 N3 A B1885 77.752 -6.297 -6.244 1.00 47.74 N
ATOM 23 C4 A B1885 78.970 -6.239 -6.799 1.00 41.20 C
ATOM 24 P A B1886 78.429 -9.139 -12.751 1.00 48.48 P
ATOM 25 OP1 A B1886 79.704 -9.060 -13.518 1.00 57.41 O
ATOM 26 OP2 A B1886 77.680 -7.900 -12.485 1.00 63.48 O
ATOM 27 O5' A B1886 77.467 -10.183 -13.434 1.00 57.86 O
TER

Atoms:
C4: (84.612,-5.811,-7.193)
N3: (83.823,-4.759,-6.763)
OP1: (91.222,-5.635,-3.494)
OP2: (88.990,-6.856,-3.561)
C2: (84.251,-3.593,-6.177)
C1': (86.209,-2.285,-5.435)
C3': (87.076,-2.508,-3.237)
O5': (89.061,-4.352,-3.522)
O4': (87.606,-2.376,-5.521)
C5': (89.399,-3.114,-4.111)
P: (89.815,-5.683,-3.939)
C4': (88.199,-2.220,-4.218)
C2': (85.829,-2.043,-3.977)
O2': (85.629,-0.652,-3.801)
N1: (85.625,-3.519,-5.998)
O4: (84.095,-6.811,-7.706)
O2: (83.463,-2.715,-5.829)
C6: (86.461,-4.512,-6.415)
C5: (86.011,-5.623,-6.978)
O3': (87.266,-1.853,-2.006)
OP1: (81.560,-13.240,-10.338)
OP2: (83.857,-12.568,-9.552)
C3': (79.343,-9.047,-10.252)
C1': (79.157,-8.567,-7.914)
C5': (81.816,-9.690,-9.905)
O4': (80.299,-9.358,-8.094)
C8: (80.811,-6.633,-7.851)
O2': (77.335,-9.649,-9.047)
C6: (79.385,-4.037,-6.020)
C5: (79.821,-5.161,-6.727)
C4: (78.970,-6.239,-6.799)
P: (82.437,-12.230,-9.735)
C4': (80.395,-9.835,-9.452)
C2': (78.319,-8.634,-9.200)
C2: (77.443,-5.163,-5.605)
N1: (78.169,-4.057,-5.458)
N3: (77.752,-6.297,-6.244)
N6: (80.119,-2.947,-5.878)
N7: (80.991,-5.419,-7.398)
N9: (79.600,-7.193,-7.559)
O5': (82.288,-10.867,-10.534)
O3': (78.764,-9.816,-11.320)
Image (generated by PyMOL):
PyMOL image
show in jmol