Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A19:A50
Extra
PDB:
ATOM 1 O3' A A 18 -41.598 -20.703 18.950 1.00 29.70 O
ATOM 2 P U A 19 -43.182 -20.788 18.722 1.00 31.87 P
ATOM 3 OP1 U A 19 -43.818 -20.707 20.071 1.00 30.96 O
ATOM 4 OP2 U A 19 -43.512 -21.935 17.799 1.00 32.74 O
ATOM 5 O5' U A 19 -43.513 -19.442 17.919 1.00 27.91 O
ATOM 6 C5' U A 19 -43.144 -18.182 18.428 1.00 27.98 C
ATOM 7 C4' U A 19 -43.377 -17.118 17.379 1.00 26.56 C
ATOM 8 O4' U A 19 -42.566 -17.446 16.222 1.00 24.09 O
ATOM 9 C3' U A 19 -44.818 -17.016 16.894 1.00 26.73 C
ATOM 10 O3' U A 19 -45.156 -15.655 16.770 1.00 29.65 O
ATOM 11 C2' U A 19 -44.758 -17.643 15.493 1.00 26.31 C
ATOM 12 O2' U A 19 -45.653 -17.089 14.547 1.00 25.87 O
ATOM 13 C1' U A 19 -43.338 -17.301 15.060 1.00 25.27 C
ATOM 14 N1 U A 19 -42.930 -18.314 14.089 1.00 25.57 N
ATOM 15 C2 U A 19 -42.825 -17.915 12.767 1.00 26.17 C
ATOM 16 O2 U A 19 -42.925 -16.770 12.438 1.00 25.05 O
ATOM 17 N3 U A 19 -42.592 -18.937 11.849 1.00 25.77 N
ATOM 18 C4 U A 19 -42.442 -20.270 12.139 1.00 26.56 C
ATOM 19 O4 U A 19 -42.497 -21.094 11.211 1.00 24.17 O
ATOM 20 C5 U A 19 -42.491 -20.582 13.556 1.00 24.01 C
ATOM 21 C6 U A 19 -42.727 -19.614 14.455 1.00 23.54 C
ATOM 22 P A A 20 -46.269 -15.002 17.734 1.00 30.06 P
ATOM 23 OP1 A A 20 -45.821 -15.404 19.111 1.00 30.01 O
ATOM 24 OP2 A A 20 -47.641 -15.289 17.293 1.00 29.56 O
ATOM 25 O5' A A 20 -46.011 -13.462 17.513 1.00 27.22 O
TER
ATOM 1 O3' A B 49 -46.176 -22.709 6.646 1.00 42.78 O
ATOM 2 P A B 50 -44.822 -23.537 6.887 1.00 43.77 P
ATOM 3 OP1 A B 50 -44.851 -24.770 6.035 1.00 45.05 O
ATOM 4 OP2 A B 50 -44.606 -23.680 8.354 1.00 45.05 O
ATOM 5 O5' A B 50 -43.716 -22.593 6.236 1.00 41.51 O
ATOM 6 C5' A B 50 -43.591 -22.486 4.806 1.00 37.29 C
ATOM 7 C4' A B 50 -42.524 -21.471 4.439 1.00 32.83 C
ATOM 8 O4' A B 50 -42.811 -20.210 5.145 1.00 32.63 O
ATOM 9 C3' A B 50 -41.093 -21.826 4.822 1.00 32.02 C
ATOM 10 O3' A B 50 -40.242 -21.129 3.919 1.00 30.72 O
ATOM 11 C2' A B 50 -41.009 -21.190 6.214 1.00 29.69 C
ATOM 12 O2' A B 50 -39.709 -20.900 6.635 1.00 29.77 O
ATOM 13 C1' A B 50 -41.699 -19.867 5.939 1.00 30.43 C
ATOM 14 N9 A B 50 -42.157 -19.082 7.093 1.00 28.45 N
ATOM 15 C8 A B 50 -42.211 -19.413 8.440 1.00 28.65 C
ATOM 16 N7 A B 50 -42.565 -18.401 9.215 1.00 28.24 N
ATOM 17 C5 A B 50 -42.784 -17.361 8.319 1.00 26.48 C
ATOM 18 C6 A B 50 -43.143 -16.014 8.508 1.00 27.03 C
ATOM 19 N6 A B 50 -43.407 -15.462 9.722 1.00 23.08 N
ATOM 20 N1 A B 50 -43.248 -15.233 7.408 1.00 25.22 N
ATOM 21 C2 A B 50 -43.039 -15.793 6.190 1.00 29.09 C
ATOM 22 N3 A B 50 -42.709 -17.046 5.891 1.00 26.78 N
ATOM 23 C4 A B 50 -42.578 -17.781 7.011 1.00 27.99 C
ATOM 24 P A B 51 -38.928 -21.811 3.316 1.00 31.69 P
ATOM 25 OP1 A B 51 -39.247 -22.145 1.871 1.00 34.38 O
ATOM 26 OP2 A B 51 -38.391 -22.889 4.209 1.00 33.31 O
ATOM 27 O5' A B 51 -37.864 -20.625 3.253 1.00 31.23 O
TER
ATOM 2 P U A 19 -43.182 -20.788 18.722 1.00 31.87 P
ATOM 3 OP1 U A 19 -43.818 -20.707 20.071 1.00 30.96 O
ATOM 4 OP2 U A 19 -43.512 -21.935 17.799 1.00 32.74 O
ATOM 5 O5' U A 19 -43.513 -19.442 17.919 1.00 27.91 O
ATOM 6 C5' U A 19 -43.144 -18.182 18.428 1.00 27.98 C
ATOM 7 C4' U A 19 -43.377 -17.118 17.379 1.00 26.56 C
ATOM 8 O4' U A 19 -42.566 -17.446 16.222 1.00 24.09 O
ATOM 9 C3' U A 19 -44.818 -17.016 16.894 1.00 26.73 C
ATOM 10 O3' U A 19 -45.156 -15.655 16.770 1.00 29.65 O
ATOM 11 C2' U A 19 -44.758 -17.643 15.493 1.00 26.31 C
ATOM 12 O2' U A 19 -45.653 -17.089 14.547 1.00 25.87 O
ATOM 13 C1' U A 19 -43.338 -17.301 15.060 1.00 25.27 C
ATOM 14 N1 U A 19 -42.930 -18.314 14.089 1.00 25.57 N
ATOM 15 C2 U A 19 -42.825 -17.915 12.767 1.00 26.17 C
ATOM 16 O2 U A 19 -42.925 -16.770 12.438 1.00 25.05 O
ATOM 17 N3 U A 19 -42.592 -18.937 11.849 1.00 25.77 N
ATOM 18 C4 U A 19 -42.442 -20.270 12.139 1.00 26.56 C
ATOM 19 O4 U A 19 -42.497 -21.094 11.211 1.00 24.17 O
ATOM 20 C5 U A 19 -42.491 -20.582 13.556 1.00 24.01 C
ATOM 21 C6 U A 19 -42.727 -19.614 14.455 1.00 23.54 C
ATOM 22 P A A 20 -46.269 -15.002 17.734 1.00 30.06 P
ATOM 23 OP1 A A 20 -45.821 -15.404 19.111 1.00 30.01 O
ATOM 24 OP2 A A 20 -47.641 -15.289 17.293 1.00 29.56 O
ATOM 25 O5' A A 20 -46.011 -13.462 17.513 1.00 27.22 O
TER
ATOM 1 O3' A B 49 -46.176 -22.709 6.646 1.00 42.78 O
ATOM 2 P A B 50 -44.822 -23.537 6.887 1.00 43.77 P
ATOM 3 OP1 A B 50 -44.851 -24.770 6.035 1.00 45.05 O
ATOM 4 OP2 A B 50 -44.606 -23.680 8.354 1.00 45.05 O
ATOM 5 O5' A B 50 -43.716 -22.593 6.236 1.00 41.51 O
ATOM 6 C5' A B 50 -43.591 -22.486 4.806 1.00 37.29 C
ATOM 7 C4' A B 50 -42.524 -21.471 4.439 1.00 32.83 C
ATOM 8 O4' A B 50 -42.811 -20.210 5.145 1.00 32.63 O
ATOM 9 C3' A B 50 -41.093 -21.826 4.822 1.00 32.02 C
ATOM 10 O3' A B 50 -40.242 -21.129 3.919 1.00 30.72 O
ATOM 11 C2' A B 50 -41.009 -21.190 6.214 1.00 29.69 C
ATOM 12 O2' A B 50 -39.709 -20.900 6.635 1.00 29.77 O
ATOM 13 C1' A B 50 -41.699 -19.867 5.939 1.00 30.43 C
ATOM 14 N9 A B 50 -42.157 -19.082 7.093 1.00 28.45 N
ATOM 15 C8 A B 50 -42.211 -19.413 8.440 1.00 28.65 C
ATOM 16 N7 A B 50 -42.565 -18.401 9.215 1.00 28.24 N
ATOM 17 C5 A B 50 -42.784 -17.361 8.319 1.00 26.48 C
ATOM 18 C6 A B 50 -43.143 -16.014 8.508 1.00 27.03 C
ATOM 19 N6 A B 50 -43.407 -15.462 9.722 1.00 23.08 N
ATOM 20 N1 A B 50 -43.248 -15.233 7.408 1.00 25.22 N
ATOM 21 C2 A B 50 -43.039 -15.793 6.190 1.00 29.09 C
ATOM 22 N3 A B 50 -42.709 -17.046 5.891 1.00 26.78 N
ATOM 23 C4 A B 50 -42.578 -17.781 7.011 1.00 27.99 C
ATOM 24 P A B 51 -38.928 -21.811 3.316 1.00 31.69 P
ATOM 25 OP1 A B 51 -39.247 -22.145 1.871 1.00 34.38 O
ATOM 26 OP2 A B 51 -38.391 -22.889 4.209 1.00 33.31 O
ATOM 27 O5' A B 51 -37.864 -20.625 3.253 1.00 31.23 O
TER
Atoms:
C4: (-42.442,-20.270,12.139)
N3: (-42.592,-18.937,11.849)
OP1: (-43.818,-20.707,20.071)
OP2: (-43.512,-21.935,17.799)
C2: (-42.825,-17.915,12.767)
C1': (-43.338,-17.301,15.060)
C3': (-44.818,-17.016,16.894)
O5': (-43.513,-19.442,17.919)
O4': (-42.566,-17.446,16.222)
C5': (-43.144,-18.182,18.428)
P: (-43.182,-20.788,18.722)
C4': (-43.377,-17.118,17.379)
C2': (-44.758,-17.643,15.493)
O2': (-45.653,-17.089,14.547)
N1: (-42.930,-18.314,14.089)
O4: (-42.497,-21.094,11.211)
O2: (-42.925,-16.770,12.438)
C6: (-42.727,-19.614,14.455)
C5: (-42.491,-20.582,13.556)
O3': (-45.156,-15.655,16.770)
N3: (-42.592,-18.937,11.849)
OP1: (-43.818,-20.707,20.071)
OP2: (-43.512,-21.935,17.799)
C2: (-42.825,-17.915,12.767)
C1': (-43.338,-17.301,15.060)
C3': (-44.818,-17.016,16.894)
O5': (-43.513,-19.442,17.919)
O4': (-42.566,-17.446,16.222)
C5': (-43.144,-18.182,18.428)
P: (-43.182,-20.788,18.722)
C4': (-43.377,-17.118,17.379)
C2': (-44.758,-17.643,15.493)
O2': (-45.653,-17.089,14.547)
N1: (-42.930,-18.314,14.089)
O4: (-42.497,-21.094,11.211)
O2: (-42.925,-16.770,12.438)
C6: (-42.727,-19.614,14.455)
C5: (-42.491,-20.582,13.556)
O3': (-45.156,-15.655,16.770)
OP1: (-44.851,-24.770,6.035)
OP2: (-44.606,-23.680,8.354)
C3': (-41.093,-21.826,4.822)
C1': (-41.699,-19.867,5.939)
C5': (-43.591,-22.486,4.806)
O4': (-42.811,-20.210,5.145)
C8: (-42.211,-19.413,8.440)
O2': (-39.709,-20.900,6.635)
C6: (-43.143,-16.014,8.508)
C5: (-42.784,-17.361,8.319)
C4: (-42.578,-17.781,7.011)
P: (-44.822,-23.537,6.887)
C4': (-42.524,-21.471,4.439)
C2': (-41.009,-21.190,6.214)
C2: (-43.039,-15.793,6.190)
N1: (-43.248,-15.233,7.408)
N3: (-42.709,-17.046,5.891)
N6: (-43.407,-15.462,9.722)
N7: (-42.565,-18.401,9.215)
N9: (-42.157,-19.082,7.093)
O5': (-43.716,-22.593,6.236)
O3': (-40.242,-21.129,3.919)
OP2: (-44.606,-23.680,8.354)
C3': (-41.093,-21.826,4.822)
C1': (-41.699,-19.867,5.939)
C5': (-43.591,-22.486,4.806)
O4': (-42.811,-20.210,5.145)
C8: (-42.211,-19.413,8.440)
O2': (-39.709,-20.900,6.635)
C6: (-43.143,-16.014,8.508)
C5: (-42.784,-17.361,8.319)
C4: (-42.578,-17.781,7.011)
P: (-44.822,-23.537,6.887)
C4': (-42.524,-21.471,4.439)
C2': (-41.009,-21.190,6.214)
C2: (-43.039,-15.793,6.190)
N1: (-43.248,-15.233,7.408)
N3: (-42.709,-17.046,5.891)
N6: (-43.407,-15.462,9.722)
N7: (-42.565,-18.401,9.215)
N9: (-42.157,-19.082,7.093)
O5': (-43.716,-22.593,6.236)
O3': (-40.242,-21.129,3.919)
Image (generated by PyMOL):