ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:0397:0396

Extra

PDB:
ATOM 1 O3' A A 396 96.640 90.418 13.358 1.00 53.35 O
ATOM 2 P U A 397 97.186 91.082 11.988 1.00 54.92 P
ATOM 3 OP1 U A 397 97.759 89.967 11.198 1.00 56.09 O
ATOM 4 OP2 U A 397 98.030 92.268 12.291 1.00 54.79 O
ATOM 5 O5' U A 397 95.874 91.575 11.232 1.00 54.60 O
ATOM 6 C5' U A 397 94.752 90.691 11.061 1.00 57.52 C
ATOM 7 C4' U A 397 93.550 91.462 10.571 1.00 59.78 C
ATOM 8 O4' U A 397 93.249 92.505 11.542 1.00 60.48 O
ATOM 9 C3' U A 397 93.714 92.165 9.222 1.00 60.20 C
ATOM 10 O3' U A 397 92.466 92.206 8.549 1.00 61.67 O
ATOM 11 C2' U A 397 94.105 93.581 9.621 1.00 60.82 C
ATOM 12 O2' U A 397 93.723 94.541 8.656 1.00 60.62 O
ATOM 13 C1' U A 397 93.305 93.771 10.911 1.00 61.35 C
ATOM 14 N1 U A 397 93.945 94.729 11.828 1.00 61.70 N
ATOM 15 C2 U A 397 93.255 95.890 12.123 1.00 62.29 C
ATOM 16 O2 U A 397 92.134 96.121 11.700 1.00 62.25 O
ATOM 17 N3 U A 397 93.927 96.774 12.936 1.00 63.34 N
ATOM 18 C4 U A 397 95.192 96.617 13.473 1.00 63.30 C
ATOM 19 O4 U A 397 95.672 97.519 14.164 1.00 64.69 O
ATOM 20 C5 U A 397 95.830 95.375 13.149 1.00 61.56 C
ATOM 21 C6 U A 397 95.202 94.496 12.362 1.00 61.72 C
ATOM 22 P A A 398 92.383 91.853 6.980 1.00 63.47 P
ATOM 23 OP1 A A 398 93.502 90.933 6.611 1.00 61.19 O
ATOM 24 OP2 A A 398 92.195 93.124 6.220 1.00 62.19 O
ATOM 25 O5' A A 398 91.009 91.054 6.892 1.00 63.97 O
TER

ATOM 1 O3' A B 395 99.243 92.893 18.433 1.00 52.09 O
ATOM 2 P A B 396 99.212 93.309 16.872 1.00 52.72 P
ATOM 3 OP1 A B 396 100.433 92.728 16.246 1.00 51.60 O
ATOM 4 OP2 A B 396 98.938 94.767 16.723 1.00 50.31 O
ATOM 5 O5' A B 396 97.932 92.548 16.306 1.00 51.81 O
ATOM 6 C5' A B 396 97.855 91.109 16.283 1.00 50.79 C
ATOM 7 C4' A B 396 96.498 90.683 15.775 1.00 51.47 C
ATOM 8 O4' A B 396 95.483 91.202 16.678 1.00 51.73 O
ATOM 9 C3' A B 396 96.121 91.243 14.408 1.00 51.84 C
ATOM 10 O3' A B 396 96.640 90.418 13.358 1.00 53.35 O
ATOM 11 C2' A B 396 94.594 91.251 14.471 1.00 52.23 C
ATOM 12 O2' A B 396 94.006 89.983 14.234 1.00 53.18 O
ATOM 13 C1' A B 396 94.350 91.631 15.938 1.00 50.62 C
ATOM 14 N9 A B 396 94.171 93.067 16.166 1.00 48.29 N
ATOM 15 C8 A B 396 95.150 93.992 16.418 1.00 47.14 C
ATOM 16 N7 A B 396 94.698 95.212 16.570 1.00 47.81 N
ATOM 17 C5 A B 396 93.328 95.084 16.414 1.00 47.13 C
ATOM 18 C6 A B 396 92.281 96.021 16.470 1.00 48.09 C
ATOM 19 N6 A B 396 92.467 97.322 16.713 1.00 47.36 N
ATOM 20 N1 A B 396 91.019 95.571 16.271 1.00 48.07 N
ATOM 21 C2 A B 396 90.837 94.266 16.042 1.00 47.86 C
ATOM 22 N3 A B 396 91.744 93.287 15.972 1.00 49.43 N
ATOM 23 C4 A B 396 92.986 93.769 16.167 1.00 47.79 C
ATOM 24 P U B 397 97.186 91.082 11.988 1.00 54.92 P
ATOM 25 OP1 U B 397 97.759 89.967 11.198 1.00 56.09 O
ATOM 26 OP2 U B 397 98.030 92.268 12.291 1.00 54.79 O
ATOM 27 O5' U B 397 95.874 91.575 11.232 1.00 54.60 O
TER

Atoms:
C4: (95.192,96.617,13.473)
N3: (93.927,96.774,12.936)
OP1: (97.759,89.967,11.198)
OP2: (98.030,92.268,12.291)
C2: (93.255,95.890,12.123)
C1': (93.305,93.771,10.911)
C3': (93.714,92.165,9.222)
O5': (95.874,91.575,11.232)
O4': (93.249,92.505,11.542)
C5': (94.752,90.691,11.061)
P: (97.186,91.082,11.988)
C4': (93.550,91.462,10.571)
C2': (94.105,93.581,9.621)
O2': (93.723,94.541,8.656)
N1: (93.945,94.729,11.828)
O4: (95.672,97.519,14.164)
O2: (92.134,96.121,11.700)
C6: (95.202,94.496,12.362)
C5: (95.830,95.375,13.149)
O3': (92.466,92.206,8.549)
OP1: (100.433,92.728,16.246)
OP2: (98.938,94.767,16.723)
C3': (96.121,91.243,14.408)
C1': (94.350,91.631,15.938)
C5': (97.855,91.109,16.283)
O4': (95.483,91.202,16.678)
C8: (95.150,93.992,16.418)
O2': (94.006,89.983,14.234)
C6: (92.281,96.021,16.470)
C5: (93.328,95.084,16.414)
C4: (92.986,93.769,16.167)
P: (99.212,93.309,16.872)
C4': (96.498,90.683,15.775)
C2': (94.594,91.251,14.471)
C2: (90.837,94.266,16.042)
N1: (91.019,95.571,16.271)
N3: (91.744,93.287,15.972)
N6: (92.467,97.322,16.713)
N7: (94.698,95.212,16.570)
N9: (94.171,93.067,16.166)
O5': (97.932,92.548,16.306)
O3': (96.640,90.418,13.358)
Image (generated by PyMOL):
PyMOL image
show in jmol