Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2112:A2130
Extra
PDB:
ATOM 1 O3' C A2111 56.729 5.745 -67.147 1.00 70.49 O
ATOM 2 P U A2112 55.614 4.856 -66.411 1.00 79.00 P
ATOM 3 OP1 U A2112 54.329 5.597 -66.534 1.00 80.12 O
ATOM 4 OP2 U A2112 56.135 4.491 -65.065 1.00 77.00 O
ATOM 5 O5' U A2112 55.523 3.552 -67.311 1.00 71.28 O
ATOM 6 C5' U A2112 55.365 3.698 -68.703 1.00 77.25 C
ATOM 7 C4' U A2112 55.415 2.366 -69.375 1.00 73.11 C
ATOM 8 O4' U A2112 56.744 1.791 -69.255 1.00 71.56 O
ATOM 9 C3' U A2112 54.417 1.345 -68.870 1.00 72.92 C
ATOM 10 O3' U A2112 53.624 0.905 -69.961 1.00 76.87 O
ATOM 11 C2' U A2112 55.282 0.313 -68.141 1.00 68.92 C
ATOM 12 O2' U A2112 54.831 -1.017 -68.200 1.00 72.76 O
ATOM 13 C1' U A2112 56.641 0.447 -68.821 1.00 75.33 C
ATOM 14 N1 U A2112 57.721 0.155 -67.862 1.00 74.97 N
ATOM 15 C2 U A2112 58.516 -0.980 -68.079 1.00 71.56 C
ATOM 16 O2 U A2112 58.354 -1.737 -69.011 1.00 68.33 O
ATOM 17 N3 U A2112 59.500 -1.195 -67.148 1.00 68.04 N
ATOM 18 C4 U A2112 59.773 -0.425 -66.035 1.00 70.99 C
ATOM 19 O4 U A2112 60.719 -0.735 -65.300 1.00 70.88 O
ATOM 20 C5 U A2112 58.906 0.717 -65.867 1.00 74.49 C
ATOM 21 C6 U A2112 57.943 0.965 -66.765 1.00 71.71 C
ATOM 22 P A A2113 52.512 -0.233 -69.749 1.00 79.09 P
ATOM 23 OP1 A A2113 51.205 0.142 -70.363 1.00 79.73 O
ATOM 24 OP2 A A2113 52.545 -0.662 -68.332 1.00 75.31 O
ATOM 25 O5' A A2113 53.165 -1.376 -70.627 1.00 71.34 O
TER
ATOM 1 O3' G B2129 63.664 -1.308 -60.804 1.00 49.17 O
ATOM 2 P A B2130 64.440 -0.363 -61.840 1.00 60.94 P
ATOM 3 OP1 A B2130 65.533 0.301 -61.076 1.00 60.98 O
ATOM 4 OP2 A B2130 63.488 0.456 -62.622 1.00 65.35 O
ATOM 5 O5' A B2130 65.064 -1.405 -62.865 1.00 54.79 O
ATOM 6 C5' A B2130 65.691 -2.570 -62.354 1.00 59.46 C
ATOM 7 C4' A B2130 65.666 -3.689 -63.360 1.00 62.20 C
ATOM 8 O4' A B2130 64.361 -3.867 -63.912 1.00 59.00 O
ATOM 9 C3' A B2130 66.616 -3.562 -64.535 1.00 61.62 C
ATOM 10 O3' A B2130 67.843 -4.204 -64.135 1.00 65.84 O
ATOM 11 C2' A B2130 65.876 -4.210 -65.714 1.00 60.95 C
ATOM 12 O2' A B2130 66.538 -5.310 -66.326 1.00 60.34 O
ATOM 13 C1' A B2130 64.483 -4.517 -65.143 1.00 59.76 C
ATOM 14 N9 A B2130 63.390 -4.037 -65.973 1.00 64.24 N
ATOM 15 C8 A B2130 62.881 -2.767 -65.990 1.00 68.22 C
ATOM 16 N7 A B2130 61.922 -2.596 -66.862 1.00 71.90 N
ATOM 17 C5 A B2130 61.780 -3.843 -67.453 1.00 66.07 C
ATOM 18 C6 A B2130 60.935 -4.310 -68.470 1.00 67.89 C
ATOM 19 N6 A B2130 60.041 -3.539 -69.085 1.00 73.17 N
ATOM 20 N1 A B2130 61.039 -5.610 -68.835 1.00 65.49 N
ATOM 21 C2 A B2130 61.930 -6.378 -68.200 1.00 60.63 C
ATOM 22 N3 A B2130 62.780 -6.054 -67.223 1.00 56.67 N
ATOM 23 C4 A B2130 62.662 -4.750 -66.899 1.00 61.62 C
ATOM 24 P C B2131 67.842 -5.759 -63.672 1.00 62.07 P
ATOM 25 OP1 C B2131 69.152 -6.329 -64.056 1.00 53.73 O
ATOM 26 OP2 C B2131 66.594 -6.411 -64.130 1.00 60.28 O
ATOM 27 O5' C B2131 67.681 -5.740 -62.081 1.00 54.07 O
TER
ATOM 2 P U A2112 55.614 4.856 -66.411 1.00 79.00 P
ATOM 3 OP1 U A2112 54.329 5.597 -66.534 1.00 80.12 O
ATOM 4 OP2 U A2112 56.135 4.491 -65.065 1.00 77.00 O
ATOM 5 O5' U A2112 55.523 3.552 -67.311 1.00 71.28 O
ATOM 6 C5' U A2112 55.365 3.698 -68.703 1.00 77.25 C
ATOM 7 C4' U A2112 55.415 2.366 -69.375 1.00 73.11 C
ATOM 8 O4' U A2112 56.744 1.791 -69.255 1.00 71.56 O
ATOM 9 C3' U A2112 54.417 1.345 -68.870 1.00 72.92 C
ATOM 10 O3' U A2112 53.624 0.905 -69.961 1.00 76.87 O
ATOM 11 C2' U A2112 55.282 0.313 -68.141 1.00 68.92 C
ATOM 12 O2' U A2112 54.831 -1.017 -68.200 1.00 72.76 O
ATOM 13 C1' U A2112 56.641 0.447 -68.821 1.00 75.33 C
ATOM 14 N1 U A2112 57.721 0.155 -67.862 1.00 74.97 N
ATOM 15 C2 U A2112 58.516 -0.980 -68.079 1.00 71.56 C
ATOM 16 O2 U A2112 58.354 -1.737 -69.011 1.00 68.33 O
ATOM 17 N3 U A2112 59.500 -1.195 -67.148 1.00 68.04 N
ATOM 18 C4 U A2112 59.773 -0.425 -66.035 1.00 70.99 C
ATOM 19 O4 U A2112 60.719 -0.735 -65.300 1.00 70.88 O
ATOM 20 C5 U A2112 58.906 0.717 -65.867 1.00 74.49 C
ATOM 21 C6 U A2112 57.943 0.965 -66.765 1.00 71.71 C
ATOM 22 P A A2113 52.512 -0.233 -69.749 1.00 79.09 P
ATOM 23 OP1 A A2113 51.205 0.142 -70.363 1.00 79.73 O
ATOM 24 OP2 A A2113 52.545 -0.662 -68.332 1.00 75.31 O
ATOM 25 O5' A A2113 53.165 -1.376 -70.627 1.00 71.34 O
TER
ATOM 1 O3' G B2129 63.664 -1.308 -60.804 1.00 49.17 O
ATOM 2 P A B2130 64.440 -0.363 -61.840 1.00 60.94 P
ATOM 3 OP1 A B2130 65.533 0.301 -61.076 1.00 60.98 O
ATOM 4 OP2 A B2130 63.488 0.456 -62.622 1.00 65.35 O
ATOM 5 O5' A B2130 65.064 -1.405 -62.865 1.00 54.79 O
ATOM 6 C5' A B2130 65.691 -2.570 -62.354 1.00 59.46 C
ATOM 7 C4' A B2130 65.666 -3.689 -63.360 1.00 62.20 C
ATOM 8 O4' A B2130 64.361 -3.867 -63.912 1.00 59.00 O
ATOM 9 C3' A B2130 66.616 -3.562 -64.535 1.00 61.62 C
ATOM 10 O3' A B2130 67.843 -4.204 -64.135 1.00 65.84 O
ATOM 11 C2' A B2130 65.876 -4.210 -65.714 1.00 60.95 C
ATOM 12 O2' A B2130 66.538 -5.310 -66.326 1.00 60.34 O
ATOM 13 C1' A B2130 64.483 -4.517 -65.143 1.00 59.76 C
ATOM 14 N9 A B2130 63.390 -4.037 -65.973 1.00 64.24 N
ATOM 15 C8 A B2130 62.881 -2.767 -65.990 1.00 68.22 C
ATOM 16 N7 A B2130 61.922 -2.596 -66.862 1.00 71.90 N
ATOM 17 C5 A B2130 61.780 -3.843 -67.453 1.00 66.07 C
ATOM 18 C6 A B2130 60.935 -4.310 -68.470 1.00 67.89 C
ATOM 19 N6 A B2130 60.041 -3.539 -69.085 1.00 73.17 N
ATOM 20 N1 A B2130 61.039 -5.610 -68.835 1.00 65.49 N
ATOM 21 C2 A B2130 61.930 -6.378 -68.200 1.00 60.63 C
ATOM 22 N3 A B2130 62.780 -6.054 -67.223 1.00 56.67 N
ATOM 23 C4 A B2130 62.662 -4.750 -66.899 1.00 61.62 C
ATOM 24 P C B2131 67.842 -5.759 -63.672 1.00 62.07 P
ATOM 25 OP1 C B2131 69.152 -6.329 -64.056 1.00 53.73 O
ATOM 26 OP2 C B2131 66.594 -6.411 -64.130 1.00 60.28 O
ATOM 27 O5' C B2131 67.681 -5.740 -62.081 1.00 54.07 O
TER
Atoms:
C4: (59.773,-0.425,-66.035)
N3: (59.500,-1.195,-67.148)
OP1: (54.329,5.597,-66.534)
OP2: (56.135,4.491,-65.065)
C2: (58.516,-0.980,-68.079)
C1': (56.641,0.447,-68.821)
C3': (54.417,1.345,-68.870)
O5': (55.523,3.552,-67.311)
O4': (56.744,1.791,-69.255)
C5': (55.365,3.698,-68.703)
P: (55.614,4.856,-66.411)
C4': (55.415,2.366,-69.375)
C2': (55.282,0.313,-68.141)
O2': (54.831,-1.017,-68.200)
N1: (57.721,0.155,-67.862)
O4: (60.719,-0.735,-65.300)
O2: (58.354,-1.737,-69.011)
C6: (57.943,0.965,-66.765)
C5: (58.906,0.717,-65.867)
O3': (53.624,0.905,-69.961)
N3: (59.500,-1.195,-67.148)
OP1: (54.329,5.597,-66.534)
OP2: (56.135,4.491,-65.065)
C2: (58.516,-0.980,-68.079)
C1': (56.641,0.447,-68.821)
C3': (54.417,1.345,-68.870)
O5': (55.523,3.552,-67.311)
O4': (56.744,1.791,-69.255)
C5': (55.365,3.698,-68.703)
P: (55.614,4.856,-66.411)
C4': (55.415,2.366,-69.375)
C2': (55.282,0.313,-68.141)
O2': (54.831,-1.017,-68.200)
N1: (57.721,0.155,-67.862)
O4: (60.719,-0.735,-65.300)
O2: (58.354,-1.737,-69.011)
C6: (57.943,0.965,-66.765)
C5: (58.906,0.717,-65.867)
O3': (53.624,0.905,-69.961)
OP1: (65.533,0.301,-61.076)
OP2: (63.488,0.456,-62.622)
C3': (66.616,-3.562,-64.535)
C1': (64.483,-4.517,-65.143)
C5': (65.691,-2.570,-62.354)
O4': (64.361,-3.867,-63.912)
C8: (62.881,-2.767,-65.990)
O2': (66.538,-5.310,-66.326)
C6: (60.935,-4.310,-68.470)
C5: (61.780,-3.843,-67.453)
C4: (62.662,-4.750,-66.899)
P: (64.440,-0.363,-61.840)
C4': (65.666,-3.689,-63.360)
C2': (65.876,-4.210,-65.714)
C2: (61.930,-6.378,-68.200)
N1: (61.039,-5.610,-68.835)
N3: (62.780,-6.054,-67.223)
N6: (60.041,-3.539,-69.085)
N7: (61.922,-2.596,-66.862)
N9: (63.390,-4.037,-65.973)
O5': (65.064,-1.405,-62.865)
O3': (67.843,-4.204,-64.135)
OP2: (63.488,0.456,-62.622)
C3': (66.616,-3.562,-64.535)
C1': (64.483,-4.517,-65.143)
C5': (65.691,-2.570,-62.354)
O4': (64.361,-3.867,-63.912)
C8: (62.881,-2.767,-65.990)
O2': (66.538,-5.310,-66.326)
C6: (60.935,-4.310,-68.470)
C5: (61.780,-3.843,-67.453)
C4: (62.662,-4.750,-66.899)
P: (64.440,-0.363,-61.840)
C4': (65.666,-3.689,-63.360)
C2': (65.876,-4.210,-65.714)
C2: (61.930,-6.378,-68.200)
N1: (61.039,-5.610,-68.835)
N3: (62.780,-6.054,-67.223)
N6: (60.041,-3.539,-69.085)
N7: (61.922,-2.596,-66.862)
N9: (63.390,-4.037,-65.973)
O5': (65.064,-1.405,-62.865)
O3': (67.843,-4.204,-64.135)
Image (generated by PyMOL):