Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:147:131
Extra
PDB:
ATOM 1 O3' A A 46 47.195 -27.607 104.419 1.00 36.94 O
ATOM 2 P U A 47 47.880 -26.637 105.452 1.00 36.02 P
ATOM 3 OP1 U A 47 48.994 -27.391 106.082 1.00 36.33 O
ATOM 4 OP2 U A 47 46.820 -26.096 106.303 1.00 36.12 O
ATOM 5 O5' U A 47 48.439 -25.493 104.518 1.00 35.71 O
ATOM 6 C5' U A 47 49.660 -25.634 103.808 1.00 35.63 C
ATOM 7 C4' U A 47 49.761 -24.591 102.725 1.00 35.28 C
ATOM 8 O4' U A 47 48.877 -24.960 101.630 1.00 35.01 O
ATOM 9 C3' U A 47 49.283 -23.202 103.128 1.00 35.23 C
ATOM 10 O3' U A 47 50.277 -22.421 103.706 1.00 35.37 O
ATOM 11 C2' U A 47 48.738 -22.614 101.854 1.00 34.85 C
ATOM 12 O2' U A 47 49.799 -22.135 101.048 1.00 34.70 O
ATOM 13 C1' U A 47 48.134 -23.844 101.199 1.00 34.77 C
ATOM 14 N1 U A 47 46.751 -24.042 101.612 1.00 34.80 N
ATOM 15 C2 U A 47 45.852 -23.166 101.051 1.00 34.56 C
ATOM 16 O2 U A 47 46.257 -22.348 100.272 1.00 34.34 O
ATOM 17 N3 U A 47 44.495 -23.248 101.352 1.00 34.58 N
ATOM 18 C4 U A 47 44.005 -24.159 102.195 1.00 34.82 C
ATOM 19 O4 U A 47 42.834 -24.077 102.365 1.00 34.81 O
ATOM 20 C5 U A 47 44.958 -25.063 102.759 1.00 35.07 C
ATOM 21 C6 U A 47 46.282 -24.988 102.478 1.00 35.06 C
ATOM 22 P A A 48 49.855 -21.318 104.753 1.00 38.76 P
ATOM 23 OP1 A A 48 51.073 -20.873 105.456 1.00 38.99 O
ATOM 24 OP2 A A 48 48.762 -21.891 105.572 1.00 38.94 O
ATOM 25 O5' A A 48 49.266 -20.172 103.811 1.00 38.42 O
TER
ATOM 1 O3' G B 30 37.012 -22.734 105.026 1.00 35.00 O
ATOM 2 P A B 31 36.838 -23.718 103.781 1.00 36.37 P
ATOM 3 OP1 A B 31 35.743 -23.169 102.976 1.00 36.14 O
ATOM 4 OP2 A B 31 36.731 -25.088 104.321 1.00 36.61 O
ATOM 5 O5' A B 31 38.214 -23.554 103.004 1.00 36.19 O
ATOM 6 C5' A B 31 38.251 -23.288 101.628 1.00 35.86 C
ATOM 7 C4' A B 31 38.014 -21.834 101.368 1.00 35.70 C
ATOM 8 O4' A B 31 38.982 -21.039 102.080 1.00 35.82 O
ATOM 9 C3' A B 31 38.134 -21.420 99.925 1.00 35.36 C
ATOM 10 O3' A B 31 36.919 -21.589 99.276 1.00 35.23 O
ATOM 11 C2' A B 31 38.541 -19.963 100.023 1.00 35.30 C
ATOM 12 O2' A B 31 37.416 -19.134 100.279 1.00 35.30 O
ATOM 13 C1' A B 31 39.410 -19.972 101.271 1.00 35.58 C
ATOM 14 N9 A B 31 40.824 -20.172 100.948 1.00 35.55 N
ATOM 15 C8 A B 31 41.604 -21.263 101.198 1.00 35.69 C
ATOM 16 N7 A B 31 42.835 -21.161 100.773 1.00 35.62 N
ATOM 17 C5 A B 31 42.816 -19.914 100.203 1.00 35.42 C
ATOM 18 C6 A B 31 43.821 -19.209 99.607 1.00 35.28 C
ATOM 19 N6 A B 31 45.011 -19.742 99.524 1.00 35.34 N
ATOM 20 N1 A B 31 43.558 -17.988 99.131 1.00 35.11 N
ATOM 21 C2 A B 31 42.317 -17.519 99.284 1.00 35.09 C
ATOM 22 N3 A B 31 41.260 -18.090 99.865 1.00 35.21 N
ATOM 23 C4 A B 31 41.595 -19.300 100.289 1.00 35.37 C
ATOM 24 P A B 32 36.686 -22.671 98.137 1.00 34.61 P
ATOM 25 OP1 A B 32 35.257 -23.055 98.210 1.00 34.65 O
ATOM 26 OP2 A B 32 37.684 -23.715 98.285 1.00 34.72 O
ATOM 27 O5' A B 32 36.981 -21.806 96.850 1.00 34.30 O
TER
ATOM 2 P U A 47 47.880 -26.637 105.452 1.00 36.02 P
ATOM 3 OP1 U A 47 48.994 -27.391 106.082 1.00 36.33 O
ATOM 4 OP2 U A 47 46.820 -26.096 106.303 1.00 36.12 O
ATOM 5 O5' U A 47 48.439 -25.493 104.518 1.00 35.71 O
ATOM 6 C5' U A 47 49.660 -25.634 103.808 1.00 35.63 C
ATOM 7 C4' U A 47 49.761 -24.591 102.725 1.00 35.28 C
ATOM 8 O4' U A 47 48.877 -24.960 101.630 1.00 35.01 O
ATOM 9 C3' U A 47 49.283 -23.202 103.128 1.00 35.23 C
ATOM 10 O3' U A 47 50.277 -22.421 103.706 1.00 35.37 O
ATOM 11 C2' U A 47 48.738 -22.614 101.854 1.00 34.85 C
ATOM 12 O2' U A 47 49.799 -22.135 101.048 1.00 34.70 O
ATOM 13 C1' U A 47 48.134 -23.844 101.199 1.00 34.77 C
ATOM 14 N1 U A 47 46.751 -24.042 101.612 1.00 34.80 N
ATOM 15 C2 U A 47 45.852 -23.166 101.051 1.00 34.56 C
ATOM 16 O2 U A 47 46.257 -22.348 100.272 1.00 34.34 O
ATOM 17 N3 U A 47 44.495 -23.248 101.352 1.00 34.58 N
ATOM 18 C4 U A 47 44.005 -24.159 102.195 1.00 34.82 C
ATOM 19 O4 U A 47 42.834 -24.077 102.365 1.00 34.81 O
ATOM 20 C5 U A 47 44.958 -25.063 102.759 1.00 35.07 C
ATOM 21 C6 U A 47 46.282 -24.988 102.478 1.00 35.06 C
ATOM 22 P A A 48 49.855 -21.318 104.753 1.00 38.76 P
ATOM 23 OP1 A A 48 51.073 -20.873 105.456 1.00 38.99 O
ATOM 24 OP2 A A 48 48.762 -21.891 105.572 1.00 38.94 O
ATOM 25 O5' A A 48 49.266 -20.172 103.811 1.00 38.42 O
TER
ATOM 1 O3' G B 30 37.012 -22.734 105.026 1.00 35.00 O
ATOM 2 P A B 31 36.838 -23.718 103.781 1.00 36.37 P
ATOM 3 OP1 A B 31 35.743 -23.169 102.976 1.00 36.14 O
ATOM 4 OP2 A B 31 36.731 -25.088 104.321 1.00 36.61 O
ATOM 5 O5' A B 31 38.214 -23.554 103.004 1.00 36.19 O
ATOM 6 C5' A B 31 38.251 -23.288 101.628 1.00 35.86 C
ATOM 7 C4' A B 31 38.014 -21.834 101.368 1.00 35.70 C
ATOM 8 O4' A B 31 38.982 -21.039 102.080 1.00 35.82 O
ATOM 9 C3' A B 31 38.134 -21.420 99.925 1.00 35.36 C
ATOM 10 O3' A B 31 36.919 -21.589 99.276 1.00 35.23 O
ATOM 11 C2' A B 31 38.541 -19.963 100.023 1.00 35.30 C
ATOM 12 O2' A B 31 37.416 -19.134 100.279 1.00 35.30 O
ATOM 13 C1' A B 31 39.410 -19.972 101.271 1.00 35.58 C
ATOM 14 N9 A B 31 40.824 -20.172 100.948 1.00 35.55 N
ATOM 15 C8 A B 31 41.604 -21.263 101.198 1.00 35.69 C
ATOM 16 N7 A B 31 42.835 -21.161 100.773 1.00 35.62 N
ATOM 17 C5 A B 31 42.816 -19.914 100.203 1.00 35.42 C
ATOM 18 C6 A B 31 43.821 -19.209 99.607 1.00 35.28 C
ATOM 19 N6 A B 31 45.011 -19.742 99.524 1.00 35.34 N
ATOM 20 N1 A B 31 43.558 -17.988 99.131 1.00 35.11 N
ATOM 21 C2 A B 31 42.317 -17.519 99.284 1.00 35.09 C
ATOM 22 N3 A B 31 41.260 -18.090 99.865 1.00 35.21 N
ATOM 23 C4 A B 31 41.595 -19.300 100.289 1.00 35.37 C
ATOM 24 P A B 32 36.686 -22.671 98.137 1.00 34.61 P
ATOM 25 OP1 A B 32 35.257 -23.055 98.210 1.00 34.65 O
ATOM 26 OP2 A B 32 37.684 -23.715 98.285 1.00 34.72 O
ATOM 27 O5' A B 32 36.981 -21.806 96.850 1.00 34.30 O
TER
Atoms:
C4: (44.005,-24.159,102.195)
N3: (44.495,-23.248,101.352)
OP1: (48.994,-27.391,106.082)
OP2: (46.820,-26.096,106.303)
C2: (45.852,-23.166,101.051)
C1': (48.134,-23.844,101.199)
C3': (49.283,-23.202,103.128)
O5': (48.439,-25.493,104.518)
O4': (48.877,-24.960,101.630)
C5': (49.660,-25.634,103.808)
P: (47.880,-26.637,105.452)
C4': (49.761,-24.591,102.725)
C2': (48.738,-22.614,101.854)
O2': (49.799,-22.135,101.048)
N1: (46.751,-24.042,101.612)
O4: (42.834,-24.077,102.365)
O2: (46.257,-22.348,100.272)
C6: (46.282,-24.988,102.478)
C5: (44.958,-25.063,102.759)
O3': (50.277,-22.421,103.706)
N3: (44.495,-23.248,101.352)
OP1: (48.994,-27.391,106.082)
OP2: (46.820,-26.096,106.303)
C2: (45.852,-23.166,101.051)
C1': (48.134,-23.844,101.199)
C3': (49.283,-23.202,103.128)
O5': (48.439,-25.493,104.518)
O4': (48.877,-24.960,101.630)
C5': (49.660,-25.634,103.808)
P: (47.880,-26.637,105.452)
C4': (49.761,-24.591,102.725)
C2': (48.738,-22.614,101.854)
O2': (49.799,-22.135,101.048)
N1: (46.751,-24.042,101.612)
O4: (42.834,-24.077,102.365)
O2: (46.257,-22.348,100.272)
C6: (46.282,-24.988,102.478)
C5: (44.958,-25.063,102.759)
O3': (50.277,-22.421,103.706)
OP1: (35.743,-23.169,102.976)
OP2: (36.731,-25.088,104.321)
C3': (38.134,-21.420,99.925)
C1': (39.410,-19.972,101.271)
C5': (38.251,-23.288,101.628)
O4': (38.982,-21.039,102.080)
C8: (41.604,-21.263,101.198)
O2': (37.416,-19.134,100.279)
C6: (43.821,-19.209,99.607)
C5: (42.816,-19.914,100.203)
C4: (41.595,-19.300,100.289)
P: (36.838,-23.718,103.781)
C4': (38.014,-21.834,101.368)
C2': (38.541,-19.963,100.023)
C2: (42.317,-17.519,99.284)
N1: (43.558,-17.988,99.131)
N3: (41.260,-18.090,99.865)
N6: (45.011,-19.742,99.524)
N7: (42.835,-21.161,100.773)
N9: (40.824,-20.172,100.948)
O5': (38.214,-23.554,103.004)
O3': (36.919,-21.589,99.276)
OP2: (36.731,-25.088,104.321)
C3': (38.134,-21.420,99.925)
C1': (39.410,-19.972,101.271)
C5': (38.251,-23.288,101.628)
O4': (38.982,-21.039,102.080)
C8: (41.604,-21.263,101.198)
O2': (37.416,-19.134,100.279)
C6: (43.821,-19.209,99.607)
C5: (42.816,-19.914,100.203)
C4: (41.595,-19.300,100.289)
P: (36.838,-23.718,103.781)
C4': (38.014,-21.834,101.368)
C2': (38.541,-19.963,100.023)
C2: (42.317,-17.519,99.284)
N1: (43.558,-17.988,99.131)
N3: (41.260,-18.090,99.865)
N6: (45.011,-19.742,99.524)
N7: (42.835,-21.161,100.773)
N9: (40.824,-20.172,100.948)
O5': (38.214,-23.554,103.004)
O3': (36.919,-21.589,99.276)
Image (generated by PyMOL):