ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:02311:02123

Extra

PDB:
ATOM 1 O3' A A2310 84.350 96.680 74.910 1.00 45.90 O
ATOM 2 P A A2311 84.994 96.098 76.265 1.00 44.86 P
ATOM 3 OP1 A A2311 86.044 95.117 75.899 1.00 45.58 O
ATOM 4 OP2 A A2311 83.872 95.693 77.148 1.00 42.82 O
ATOM 5 O5' A A2311 85.758 97.339 76.903 1.00 42.87 O
ATOM 6 C5' A A2311 85.081 98.270 77.753 1.00 40.54 C
ATOM 7 C4' A A2311 86.069 99.264 78.291 1.00 39.12 C
ATOM 8 O4' A A2311 86.596 100.079 77.214 1.00 39.74 O
ATOM 9 C3' A A2311 85.526 100.284 79.262 1.00 38.00 C
ATOM 10 O3' A A2311 85.397 99.660 80.527 1.00 37.86 O
ATOM 11 C2' A A2311 86.618 101.345 79.218 1.00 37.76 C
ATOM 12 O2' A A2311 87.770 100.954 79.936 1.00 35.22 O
ATOM 13 C1' A A2311 86.982 101.340 77.730 1.00 38.97 C
ATOM 14 N9 A A2311 86.330 102.391 76.946 1.00 39.78 N
ATOM 15 C8 A A2311 85.213 102.302 76.153 1.00 39.39 C
ATOM 16 N7 A A2311 84.878 103.434 75.580 1.00 39.29 N
ATOM 17 C5 A A2311 85.840 104.330 76.023 1.00 39.24 C
ATOM 18 C6 A A2311 86.053 105.698 75.769 1.00 37.41 C
ATOM 19 N6 A A2311 85.289 106.431 74.962 1.00 32.68 N
ATOM 20 N1 A A2311 87.099 106.294 76.378 1.00 37.50 N
ATOM 21 C2 A A2311 87.882 105.560 77.171 1.00 38.08 C
ATOM 22 N3 A A2311 87.797 104.269 77.481 1.00 40.52 N
ATOM 23 C4 A A2311 86.739 103.703 76.868 1.00 41.26 C
ATOM 24 P G A2312 84.558 100.368 81.694 1.00 36.21 P
ATOM 25 OP1 G A2312 84.768 99.518 82.884 1.00 39.52 O
ATOM 26 OP2 G A2312 83.184 100.686 81.254 1.00 40.18 O
ATOM 27 O5' G A2312 85.351 101.724 81.922 1.00 38.09 O
TER

ATOM 1 O3' U B2122 77.310 104.128 69.325 1.00 37.10 O
ATOM 2 P U B2123 76.632 104.127 70.786 1.00 36.75 P
ATOM 3 OP1 U B2123 75.207 103.798 70.575 1.00 38.70 O
ATOM 4 OP2 U B2123 76.994 105.361 71.530 1.00 38.42 O
ATOM 5 O5' U B2123 77.322 102.901 71.538 1.00 37.15 O
ATOM 6 C5' U B2123 77.254 101.570 71.015 1.00 35.23 C
ATOM 7 C4' U B2123 78.367 100.737 71.598 1.00 36.81 C
ATOM 8 O4' U B2123 79.630 101.349 71.239 1.00 36.10 O
ATOM 9 C3' U B2123 78.420 100.647 73.118 1.00 36.23 C
ATOM 10 O3' U B2123 77.553 99.634 73.598 1.00 38.08 O
ATOM 11 C2' U B2123 79.880 100.302 73.362 1.00 37.23 C
ATOM 12 O2' U B2123 80.185 98.949 73.101 1.00 36.99 O
ATOM 13 C1' U B2123 80.568 101.148 72.288 1.00 37.98 C
ATOM 14 N1 U B2123 81.055 102.455 72.767 1.00 36.45 N
ATOM 15 C2 U B2123 82.253 102.469 73.460 1.00 37.00 C
ATOM 16 O2 U B2123 82.897 101.462 73.688 1.00 35.68 O
ATOM 17 N3 U B2123 82.673 103.709 73.871 1.00 37.86 N
ATOM 18 C4 U B2123 82.043 104.914 73.654 1.00 37.47 C
ATOM 19 O4 U B2123 82.567 105.947 74.068 1.00 36.76 O
ATOM 20 C5 U B2123 80.805 104.823 72.941 1.00 35.75 C
ATOM 21 C6 U B2123 80.361 103.627 72.538 1.00 35.67 C
ATOM 22 P U B2124 76.885 99.760 75.058 1.00 39.92 P
ATOM 23 OP1 U B2124 76.164 98.460 75.257 1.00 40.06 O
ATOM 24 OP2 U B2124 76.139 101.049 75.225 1.00 37.32 O
ATOM 25 O5' U B2124 78.131 99.795 76.046 1.00 38.52 O
TER

Atoms:
OP1: (86.044,95.117,75.899)
OP2: (83.872,95.693,77.148)
C3': (85.526,100.284,79.262)
C1': (86.982,101.340,77.730)
C5': (85.081,98.270,77.753)
O4': (86.596,100.079,77.214)
C8: (85.213,102.302,76.153)
O2': (87.770,100.954,79.936)
C6: (86.053,105.698,75.769)
C5: (85.840,104.330,76.023)
C4: (86.739,103.703,76.868)
P: (84.994,96.098,76.265)
C4': (86.069,99.264,78.291)
C2': (86.618,101.345,79.218)
C2: (87.882,105.560,77.171)
N1: (87.099,106.294,76.378)
N3: (87.797,104.269,77.481)
N6: (85.289,106.431,74.962)
N7: (84.878,103.434,75.580)
N9: (86.330,102.391,76.946)
O5': (85.758,97.339,76.903)
O3': (85.397,99.660,80.527)
C4: (82.043,104.914,73.654)
N3: (82.673,103.709,73.871)
OP1: (75.207,103.798,70.575)
OP2: (76.994,105.361,71.530)
C2: (82.253,102.469,73.460)
C1': (80.568,101.148,72.288)
C3': (78.420,100.647,73.118)
O5': (77.322,102.901,71.538)
O4': (79.630,101.349,71.239)
C5': (77.254,101.570,71.015)
P: (76.632,104.127,70.786)
C4': (78.367,100.737,71.598)
C2': (79.880,100.302,73.362)
O2': (80.185,98.949,73.101)
N1: (81.055,102.455,72.767)
O4: (82.567,105.947,74.068)
O2: (82.897,101.462,73.688)
C6: (80.361,103.627,72.538)
C5: (80.805,104.823,72.941)
O3': (77.553,99.634,73.598)
Image (generated by PyMOL):
PyMOL image
show in jmol