ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1519:A1368

Extra

PDB:
ATOM 1 O3' C A1518 10.230 -8.005 -47.620 1.00 93.00 O
ATOM 2 P U A1519 8.916 -8.368 -48.461 1.00 77.83 P
ATOM 3 OP1 U A1519 7.765 -7.864 -47.680 1.00 84.95 O
ATOM 4 OP2 U A1519 8.980 -9.814 -48.777 1.00 94.52 O
ATOM 5 O5' U A1519 9.097 -7.541 -49.800 1.00100.43 O
ATOM 6 C5' U A1519 9.362 -8.216 -51.020 1.00119.22 C
ATOM 7 C4' U A1519 10.841 -8.364 -51.257 1.00117.08 C
ATOM 8 O4' U A1519 11.463 -9.034 -50.130 1.00100.37 O
ATOM 9 C3' U A1519 11.255 -9.217 -52.441 1.00119.00 C
ATOM 10 O3' U A1519 11.118 -8.559 -53.691 1.00123.82 O
ATOM 11 C2' U A1519 12.689 -9.546 -52.083 1.00111.88 C
ATOM 12 O2' U A1519 13.516 -8.412 -52.267 1.00120.83 O
ATOM 13 C1' U A1519 12.559 -9.800 -50.586 1.00 99.88 C
ATOM 14 N1 U A1519 12.289 -11.223 -50.307 1.00 76.06 N
ATOM 15 C2 U A1519 13.096 -12.172 -50.921 1.00 74.35 C
ATOM 16 O2 U A1519 14.015 -11.887 -51.647 1.00 78.15 O
ATOM 17 N3 U A1519 12.812 -13.494 -50.673 1.00 74.25 N
ATOM 18 C4 U A1519 11.800 -13.981 -49.860 1.00 69.50 C
ATOM 19 O4 U A1519 11.644 -15.209 -49.711 1.00 63.47 O
ATOM 20 C5 U A1519 11.019 -12.937 -49.254 1.00 65.43 C
ATOM 21 C6 U A1519 11.271 -11.638 -49.496 1.00 73.59 C
ATOM 22 P A A1520 10.388 -9.301 -54.916 1.00 89.51 P
ATOM 23 OP1 A A1520 9.651 -8.267 -55.679 1.00154.87 O
ATOM 24 OP2 A A1520 9.632 -10.441 -54.339 1.00135.10 O
ATOM 25 O5' A A1520 11.595 -9.838 -55.783 1.00 71.50 O
TER

ATOM 1 O3' G B1367 9.796 -20.814 -51.227 1.00 73.38 O
ATOM 2 P A B1368 10.955 -20.897 -50.153 1.00 80.21 P
ATOM 3 OP1 A B1368 11.067 -22.320 -49.735 1.00 75.63 O
ATOM 4 OP2 A B1368 10.637 -19.872 -49.129 1.00 64.15 O
ATOM 5 O5' A B1368 12.251 -20.476 -50.983 1.00 79.92 O
ATOM 6 C5' A B1368 12.859 -21.393 -51.893 1.00 87.18 C
ATOM 7 C4' A B1368 14.383 -21.377 -51.825 1.00 91.28 C
ATOM 8 O4' A B1368 14.891 -20.106 -52.319 1.00 92.42 O
ATOM 9 C3' A B1368 14.997 -21.555 -50.440 1.00 98.09 C
ATOM 10 O3' A B1368 16.269 -22.209 -50.576 1.00 98.48 O
ATOM 11 C2' A B1368 15.216 -20.111 -50.011 1.00 84.38 C
ATOM 12 O2' A B1368 16.150 -19.941 -48.972 1.00 89.64 O
ATOM 13 C1' A B1368 15.697 -19.507 -51.322 1.00 87.23 C
ATOM 14 N9 A B1368 15.543 -18.054 -51.423 1.00 81.96 N
ATOM 15 C8 A B1368 14.670 -17.186 -50.814 1.00 80.07 C
ATOM 16 N7 A B1368 14.826 -15.932 -51.172 1.00 70.03 N
ATOM 17 C5 A B1368 15.868 -15.985 -52.071 1.00 69.95 C
ATOM 18 C6 A B1368 16.522 -15.001 -52.822 1.00 76.91 C
ATOM 19 N6 A B1368 16.206 -13.715 -52.757 1.00 86.20 N
ATOM 20 N1 A B1368 17.531 -15.380 -53.645 1.00 80.20 N
ATOM 21 C2 A B1368 17.859 -16.683 -53.698 1.00 84.68 C
ATOM 22 N3 A B1368 17.308 -17.708 -53.041 1.00 87.89 N
ATOM 23 C4 A B1368 16.313 -17.279 -52.239 1.00 79.13 C
ATOM 24 P U B1369 16.515 -23.653 -49.910 1.00 98.65 P
ATOM 25 OP1 U B1369 17.261 -24.471 -50.892 1.00160.24 O
ATOM 26 OP2 U B1369 15.196 -24.143 -49.431 1.00170.39 O
ATOM 27 O5' U B1369 17.436 -23.314 -48.666 1.00 96.43 O
TER

Atoms:
C4: (11.800,-13.981,-49.860)
N3: (12.812,-13.494,-50.673)
OP1: (7.765,-7.864,-47.680)
OP2: (8.980,-9.814,-48.777)
C2: (13.096,-12.172,-50.921)
C1': (12.559,-9.800,-50.586)
C3': (11.255,-9.217,-52.441)
O5': (9.097,-7.541,-49.800)
O4': (11.463,-9.034,-50.130)
C5': (9.362,-8.216,-51.020)
P: (8.916,-8.368,-48.461)
C4': (10.841,-8.364,-51.257)
C2': (12.689,-9.546,-52.083)
O2': (13.516,-8.412,-52.267)
N1: (12.289,-11.223,-50.307)
O4: (11.644,-15.209,-49.711)
O2: (14.015,-11.887,-51.647)
C6: (11.271,-11.638,-49.496)
C5: (11.019,-12.937,-49.254)
O3': (11.118,-8.559,-53.691)
OP1: (11.067,-22.320,-49.735)
OP2: (10.637,-19.872,-49.129)
C3': (14.997,-21.555,-50.440)
C1': (15.697,-19.507,-51.322)
C5': (12.859,-21.393,-51.893)
O4': (14.891,-20.106,-52.319)
C8: (14.670,-17.186,-50.814)
O2': (16.150,-19.941,-48.972)
C6: (16.522,-15.001,-52.822)
C5: (15.868,-15.985,-52.071)
C4: (16.313,-17.279,-52.239)
P: (10.955,-20.897,-50.153)
C4': (14.383,-21.377,-51.825)
C2': (15.216,-20.111,-50.011)
C2: (17.859,-16.683,-53.698)
N1: (17.531,-15.380,-53.645)
N3: (17.308,-17.708,-53.041)
N6: (16.206,-13.715,-52.757)
N7: (14.826,-15.932,-51.172)
N9: (15.543,-18.054,-51.423)
O5': (12.251,-20.476,-50.983)
O3': (16.269,-22.209,-50.576)
Image (generated by PyMOL):
PyMOL image
show in jmol