Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DK1:B15:B51
Extra
PDB:
ATOM 1 O3' C A 14 -13.917 47.800 6.965 1.00 56.32 O
ATOM 2 P U A 15 -12.764 48.847 7.348 1.00 54.80 P
ATOM 3 OP1 U A 15 -12.220 49.517 6.144 1.00 37.64 O
ATOM 4 OP2 U A 15 -11.835 48.121 8.256 1.00 67.17 O
ATOM 5 O5' U A 15 -13.547 49.929 8.200 1.00 41.92 O
ATOM 6 C5' U A 15 -12.866 50.689 9.193 1.00 66.48 C
ATOM 7 C4' U A 15 -13.232 50.196 10.569 1.00 59.39 C
ATOM 8 O4' U A 15 -12.866 48.810 10.735 1.00 61.59 O
ATOM 9 C3' U A 15 -12.459 50.883 11.681 1.00 64.41 C
ATOM 10 O3' U A 15 -13.184 52.089 11.938 1.00 75.77 O
ATOM 11 C2' U A 15 -12.574 49.891 12.845 1.00 60.68 C
ATOM 12 O2' U A 15 -13.729 50.147 13.619 1.00 74.24 O
ATOM 13 C1' U A 15 -12.794 48.554 12.121 1.00 59.51 C
ATOM 14 N1 U A 15 -11.952 47.371 12.380 1.00 42.80 N
ATOM 15 C2 U A 15 -11.869 46.875 13.695 1.00 51.49 C
ATOM 16 O2 U A 15 -12.337 47.452 14.671 1.00 52.12 O
ATOM 17 N3 U A 15 -11.196 45.683 13.823 1.00 43.76 N
ATOM 18 C4 U A 15 -10.573 44.973 12.813 1.00 53.64 C
ATOM 19 O4 U A 15 -10.049 43.895 13.077 1.00 66.04 O
ATOM 20 C5 U A 15 -10.639 45.579 11.511 1.00 38.22 C
ATOM 21 C6 U A 15 -11.306 46.728 11.346 1.00 40.00 C
ATOM 22 P A A 16 -12.475 53.348 12.631 1.00 62.94 P
ATOM 23 OP1 A A 16 -13.052 54.561 12.022 1.00 71.17 O
ATOM 24 OP2 A A 16 -11.014 53.128 12.575 1.00 64.58 O
ATOM 25 O5' A A 16 -12.996 53.281 14.134 1.00 51.60 O
TER
ATOM 1 O3' G B 50 -7.250 41.494 12.541 1.00 36.47 O
ATOM 2 P A B 51 -7.810 40.058 12.968 1.00 50.65 P
ATOM 3 OP1 A B 51 -6.725 39.054 12.754 1.00 37.48 O
ATOM 4 OP2 A B 51 -9.125 39.897 12.287 1.00 40.67 O
ATOM 5 O5' A B 51 -8.024 40.192 14.544 1.00 45.62 O
ATOM 6 C5' A B 51 -6.880 40.289 15.416 1.00 49.12 C
ATOM 7 C4' A B 51 -7.312 40.385 16.853 1.00 44.78 C
ATOM 8 O4' A B 51 -7.834 41.713 17.117 1.00 45.37 O
ATOM 9 C3' A B 51 -8.434 39.448 17.234 1.00 38.50 C
ATOM 10 O3' A B 51 -8.235 38.070 17.507 1.00 48.03 O
ATOM 11 C2' A B 51 -9.699 40.285 17.305 1.00 42.04 C
ATOM 12 O2' A B 51 -10.599 39.860 18.307 1.00 46.69 O
ATOM 13 C1' A B 51 -9.100 41.618 17.742 1.00 42.16 C
ATOM 14 N9 A B 51 -9.869 42.809 17.387 1.00 29.48 N
ATOM 15 C8 A B 51 -9.949 43.453 16.176 1.00 34.49 C
ATOM 16 N7 A B 51 -10.690 44.535 16.197 1.00 33.94 N
ATOM 17 C5 A B 51 -11.141 44.598 17.508 1.00 29.51 C
ATOM 18 C6 A B 51 -11.986 45.498 18.169 1.00 34.56 C
ATOM 19 N6 A B 51 -12.571 46.541 17.567 1.00 37.44 N
ATOM 20 N1 A B 51 -12.228 45.283 19.483 1.00 34.88 N
ATOM 21 C2 A B 51 -11.670 44.214 20.070 1.00 36.91 C
ATOM 22 N3 A B 51 -10.873 43.279 19.543 1.00 20.48 N
ATOM 23 C4 A B 51 -10.646 43.537 18.248 1.00 26.18 C
ATOM 24 P C B 52 -7.318 37.643 18.743 1.00 54.94 P
ATOM 25 OP1 C B 52 -7.089 36.179 18.735 1.00 62.93 O
ATOM 26 OP2 C B 52 -7.907 38.281 19.949 1.00 38.35 O
ATOM 27 O5' C B 52 -5.931 38.308 18.351 1.00 53.36 O
TER
ATOM 2 P U A 15 -12.764 48.847 7.348 1.00 54.80 P
ATOM 3 OP1 U A 15 -12.220 49.517 6.144 1.00 37.64 O
ATOM 4 OP2 U A 15 -11.835 48.121 8.256 1.00 67.17 O
ATOM 5 O5' U A 15 -13.547 49.929 8.200 1.00 41.92 O
ATOM 6 C5' U A 15 -12.866 50.689 9.193 1.00 66.48 C
ATOM 7 C4' U A 15 -13.232 50.196 10.569 1.00 59.39 C
ATOM 8 O4' U A 15 -12.866 48.810 10.735 1.00 61.59 O
ATOM 9 C3' U A 15 -12.459 50.883 11.681 1.00 64.41 C
ATOM 10 O3' U A 15 -13.184 52.089 11.938 1.00 75.77 O
ATOM 11 C2' U A 15 -12.574 49.891 12.845 1.00 60.68 C
ATOM 12 O2' U A 15 -13.729 50.147 13.619 1.00 74.24 O
ATOM 13 C1' U A 15 -12.794 48.554 12.121 1.00 59.51 C
ATOM 14 N1 U A 15 -11.952 47.371 12.380 1.00 42.80 N
ATOM 15 C2 U A 15 -11.869 46.875 13.695 1.00 51.49 C
ATOM 16 O2 U A 15 -12.337 47.452 14.671 1.00 52.12 O
ATOM 17 N3 U A 15 -11.196 45.683 13.823 1.00 43.76 N
ATOM 18 C4 U A 15 -10.573 44.973 12.813 1.00 53.64 C
ATOM 19 O4 U A 15 -10.049 43.895 13.077 1.00 66.04 O
ATOM 20 C5 U A 15 -10.639 45.579 11.511 1.00 38.22 C
ATOM 21 C6 U A 15 -11.306 46.728 11.346 1.00 40.00 C
ATOM 22 P A A 16 -12.475 53.348 12.631 1.00 62.94 P
ATOM 23 OP1 A A 16 -13.052 54.561 12.022 1.00 71.17 O
ATOM 24 OP2 A A 16 -11.014 53.128 12.575 1.00 64.58 O
ATOM 25 O5' A A 16 -12.996 53.281 14.134 1.00 51.60 O
TER
ATOM 1 O3' G B 50 -7.250 41.494 12.541 1.00 36.47 O
ATOM 2 P A B 51 -7.810 40.058 12.968 1.00 50.65 P
ATOM 3 OP1 A B 51 -6.725 39.054 12.754 1.00 37.48 O
ATOM 4 OP2 A B 51 -9.125 39.897 12.287 1.00 40.67 O
ATOM 5 O5' A B 51 -8.024 40.192 14.544 1.00 45.62 O
ATOM 6 C5' A B 51 -6.880 40.289 15.416 1.00 49.12 C
ATOM 7 C4' A B 51 -7.312 40.385 16.853 1.00 44.78 C
ATOM 8 O4' A B 51 -7.834 41.713 17.117 1.00 45.37 O
ATOM 9 C3' A B 51 -8.434 39.448 17.234 1.00 38.50 C
ATOM 10 O3' A B 51 -8.235 38.070 17.507 1.00 48.03 O
ATOM 11 C2' A B 51 -9.699 40.285 17.305 1.00 42.04 C
ATOM 12 O2' A B 51 -10.599 39.860 18.307 1.00 46.69 O
ATOM 13 C1' A B 51 -9.100 41.618 17.742 1.00 42.16 C
ATOM 14 N9 A B 51 -9.869 42.809 17.387 1.00 29.48 N
ATOM 15 C8 A B 51 -9.949 43.453 16.176 1.00 34.49 C
ATOM 16 N7 A B 51 -10.690 44.535 16.197 1.00 33.94 N
ATOM 17 C5 A B 51 -11.141 44.598 17.508 1.00 29.51 C
ATOM 18 C6 A B 51 -11.986 45.498 18.169 1.00 34.56 C
ATOM 19 N6 A B 51 -12.571 46.541 17.567 1.00 37.44 N
ATOM 20 N1 A B 51 -12.228 45.283 19.483 1.00 34.88 N
ATOM 21 C2 A B 51 -11.670 44.214 20.070 1.00 36.91 C
ATOM 22 N3 A B 51 -10.873 43.279 19.543 1.00 20.48 N
ATOM 23 C4 A B 51 -10.646 43.537 18.248 1.00 26.18 C
ATOM 24 P C B 52 -7.318 37.643 18.743 1.00 54.94 P
ATOM 25 OP1 C B 52 -7.089 36.179 18.735 1.00 62.93 O
ATOM 26 OP2 C B 52 -7.907 38.281 19.949 1.00 38.35 O
ATOM 27 O5' C B 52 -5.931 38.308 18.351 1.00 53.36 O
TER
Atoms:
C4: (-10.573,44.973,12.813)
N3: (-11.196,45.683,13.823)
OP1: (-12.220,49.517,6.144)
OP2: (-11.835,48.121,8.256)
C2: (-11.869,46.875,13.695)
C1': (-12.794,48.554,12.121)
C3': (-12.459,50.883,11.681)
O5': (-13.547,49.929,8.200)
O4': (-12.866,48.810,10.735)
C5': (-12.866,50.689,9.193)
P: (-12.764,48.847,7.348)
C4': (-13.232,50.196,10.569)
C2': (-12.574,49.891,12.845)
O2': (-13.729,50.147,13.619)
N1: (-11.952,47.371,12.380)
O4: (-10.049,43.895,13.077)
O2: (-12.337,47.452,14.671)
C6: (-11.306,46.728,11.346)
C5: (-10.639,45.579,11.511)
O3': (-13.184,52.089,11.938)
N3: (-11.196,45.683,13.823)
OP1: (-12.220,49.517,6.144)
OP2: (-11.835,48.121,8.256)
C2: (-11.869,46.875,13.695)
C1': (-12.794,48.554,12.121)
C3': (-12.459,50.883,11.681)
O5': (-13.547,49.929,8.200)
O4': (-12.866,48.810,10.735)
C5': (-12.866,50.689,9.193)
P: (-12.764,48.847,7.348)
C4': (-13.232,50.196,10.569)
C2': (-12.574,49.891,12.845)
O2': (-13.729,50.147,13.619)
N1: (-11.952,47.371,12.380)
O4: (-10.049,43.895,13.077)
O2: (-12.337,47.452,14.671)
C6: (-11.306,46.728,11.346)
C5: (-10.639,45.579,11.511)
O3': (-13.184,52.089,11.938)
OP1: (-6.725,39.054,12.754)
OP2: (-9.125,39.897,12.287)
C3': (-8.434,39.448,17.234)
C1': (-9.100,41.618,17.742)
C5': (-6.880,40.289,15.416)
O4': (-7.834,41.713,17.117)
C8: (-9.949,43.453,16.176)
O2': (-10.599,39.860,18.307)
C6: (-11.986,45.498,18.169)
C5: (-11.141,44.598,17.508)
C4: (-10.646,43.537,18.248)
P: (-7.810,40.058,12.968)
C4': (-7.312,40.385,16.853)
C2': (-9.699,40.285,17.305)
C2: (-11.670,44.214,20.070)
N1: (-12.228,45.283,19.483)
N3: (-10.873,43.279,19.543)
N6: (-12.571,46.541,17.567)
N7: (-10.690,44.535,16.197)
N9: (-9.869,42.809,17.387)
O5': (-8.024,40.192,14.544)
O3': (-8.235,38.070,17.507)
OP2: (-9.125,39.897,12.287)
C3': (-8.434,39.448,17.234)
C1': (-9.100,41.618,17.742)
C5': (-6.880,40.289,15.416)
O4': (-7.834,41.713,17.117)
C8: (-9.949,43.453,16.176)
O2': (-10.599,39.860,18.307)
C6: (-11.986,45.498,18.169)
C5: (-11.141,44.598,17.508)
C4: (-10.646,43.537,18.248)
P: (-7.810,40.058,12.968)
C4': (-7.312,40.385,16.853)
C2': (-9.699,40.285,17.305)
C2: (-11.670,44.214,20.070)
N1: (-12.228,45.283,19.483)
N3: (-10.873,43.279,19.543)
N6: (-12.571,46.541,17.567)
N7: (-10.690,44.535,16.197)
N9: (-9.869,42.809,17.387)
O5': (-8.024,40.192,14.544)
O3': (-8.235,38.070,17.507)
Image (generated by PyMOL):