Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0577:0557
Extra
PDB:
ATOM 1 O3' G A 576 -8.283 89.891 106.786 1.00 74.38 O
ATOM 2 P U A 577 -8.672 90.784 105.505 1.00 75.24 P
ATOM 3 OP1 U A 577 -9.308 89.898 104.490 1.00 73.81 O
ATOM 4 OP2 U A 577 -7.492 91.596 105.124 1.00 76.26 O
ATOM 5 O5' U A 577 -9.748 91.801 106.103 1.00 75.26 O
ATOM 6 C5' U A 577 -11.040 91.342 106.576 1.00 74.14 C
ATOM 7 C4' U A 577 -11.473 92.137 107.791 1.00 72.97 C
ATOM 8 O4' U A 577 -10.779 91.673 108.977 1.00 71.82 O
ATOM 9 C3' U A 577 -11.176 93.627 107.741 1.00 73.72 C
ATOM 10 O3' U A 577 -12.147 94.338 106.975 1.00 75.17 O
ATOM 11 C2' U A 577 -11.169 94.020 109.216 1.00 72.63 C
ATOM 12 O2' U A 577 -12.449 94.272 109.748 1.00 72.27 O
ATOM 13 C1' U A 577 -10.588 92.762 109.873 1.00 71.51 C
ATOM 14 N1 U A 577 -9.164 92.838 110.251 1.00 69.94 N
ATOM 15 C2 U A 577 -8.789 93.764 111.228 1.00 69.92 C
ATOM 16 O2 U A 577 -9.577 94.516 111.779 1.00 67.92 O
ATOM 17 N3 U A 577 -7.450 93.771 111.536 1.00 69.83 N
ATOM 18 C4 U A 577 -6.465 92.972 110.992 1.00 70.66 C
ATOM 19 O4 U A 577 -5.302 93.102 111.376 1.00 71.00 O
ATOM 20 C5 U A 577 -6.924 92.047 109.999 1.00 70.30 C
ATOM 21 C6 U A 577 -8.221 92.015 109.668 1.00 69.84 C
ATOM 22 P A A 578 -11.741 95.719 106.259 1.00 77.40 P
ATOM 23 OP1 A A 578 -12.928 96.245 105.542 1.00 78.62 O
ATOM 24 OP2 A A 578 -10.472 95.512 105.516 1.00 79.00 O
ATOM 25 O5' A A 578 -11.448 96.698 107.474 1.00 75.57 O
TER
ATOM 1 O3' G B 556 0.039 94.160 112.489 1.00 61.66 O
ATOM 2 P A B 557 -0.532 92.980 113.416 1.00 63.74 P
ATOM 3 OP1 A B 557 0.165 93.091 114.721 1.00 65.20 O
ATOM 4 OP2 A B 557 -0.488 91.690 112.672 1.00 59.76 O
ATOM 5 O5' A B 557 -2.056 93.404 113.612 1.00 63.78 O
ATOM 6 C5' A B 557 -2.577 93.742 114.910 1.00 60.81 C
ATOM 7 C4' A B 557 -2.394 95.212 115.181 1.00 60.05 C
ATOM 8 O4' A B 557 -2.820 95.992 114.033 1.00 58.73 O
ATOM 9 C3' A B 557 -3.225 95.730 116.336 1.00 62.01 C
ATOM 10 O3' A B 557 -2.613 95.486 117.594 1.00 65.94 O
ATOM 11 C2' A B 557 -3.414 97.198 115.977 1.00 60.61 C
ATOM 12 O2' A B 557 -2.304 98.024 116.263 1.00 59.05 O
ATOM 13 C1' A B 557 -3.608 97.094 114.464 1.00 58.82 C
ATOM 14 N9 A B 557 -5.003 96.804 114.119 1.00 57.89 N
ATOM 15 C8 A B 557 -5.482 95.707 113.436 1.00 58.53 C
ATOM 16 N7 A B 557 -6.782 95.699 113.294 1.00 56.66 N
ATOM 17 C5 A B 557 -7.191 96.869 113.917 1.00 55.69 C
ATOM 18 C6 A B 557 -8.453 97.435 114.102 1.00 55.20 C
ATOM 19 N6 A B 557 -9.579 96.872 113.648 1.00 53.47 N
ATOM 20 N1 A B 557 -8.524 98.612 114.769 1.00 55.47 N
ATOM 21 C2 A B 557 -7.390 99.171 115.207 1.00 53.72 C
ATOM 22 N3 A B 557 -6.140 98.735 115.089 1.00 56.42 N
ATOM 23 C4 A B 557 -6.108 97.563 114.426 1.00 56.07 C
ATOM 24 P C B 558 -3.532 95.204 118.882 1.00 66.99 P
ATOM 25 OP1 C B 558 -2.643 94.812 120.004 1.00 68.72 O
ATOM 26 OP2 C B 558 -4.629 94.294 118.469 1.00 67.10 O
ATOM 27 O5' C B 558 -4.121 96.640 119.233 1.00 66.58 O
TER
ATOM 2 P U A 577 -8.672 90.784 105.505 1.00 75.24 P
ATOM 3 OP1 U A 577 -9.308 89.898 104.490 1.00 73.81 O
ATOM 4 OP2 U A 577 -7.492 91.596 105.124 1.00 76.26 O
ATOM 5 O5' U A 577 -9.748 91.801 106.103 1.00 75.26 O
ATOM 6 C5' U A 577 -11.040 91.342 106.576 1.00 74.14 C
ATOM 7 C4' U A 577 -11.473 92.137 107.791 1.00 72.97 C
ATOM 8 O4' U A 577 -10.779 91.673 108.977 1.00 71.82 O
ATOM 9 C3' U A 577 -11.176 93.627 107.741 1.00 73.72 C
ATOM 10 O3' U A 577 -12.147 94.338 106.975 1.00 75.17 O
ATOM 11 C2' U A 577 -11.169 94.020 109.216 1.00 72.63 C
ATOM 12 O2' U A 577 -12.449 94.272 109.748 1.00 72.27 O
ATOM 13 C1' U A 577 -10.588 92.762 109.873 1.00 71.51 C
ATOM 14 N1 U A 577 -9.164 92.838 110.251 1.00 69.94 N
ATOM 15 C2 U A 577 -8.789 93.764 111.228 1.00 69.92 C
ATOM 16 O2 U A 577 -9.577 94.516 111.779 1.00 67.92 O
ATOM 17 N3 U A 577 -7.450 93.771 111.536 1.00 69.83 N
ATOM 18 C4 U A 577 -6.465 92.972 110.992 1.00 70.66 C
ATOM 19 O4 U A 577 -5.302 93.102 111.376 1.00 71.00 O
ATOM 20 C5 U A 577 -6.924 92.047 109.999 1.00 70.30 C
ATOM 21 C6 U A 577 -8.221 92.015 109.668 1.00 69.84 C
ATOM 22 P A A 578 -11.741 95.719 106.259 1.00 77.40 P
ATOM 23 OP1 A A 578 -12.928 96.245 105.542 1.00 78.62 O
ATOM 24 OP2 A A 578 -10.472 95.512 105.516 1.00 79.00 O
ATOM 25 O5' A A 578 -11.448 96.698 107.474 1.00 75.57 O
TER
ATOM 1 O3' G B 556 0.039 94.160 112.489 1.00 61.66 O
ATOM 2 P A B 557 -0.532 92.980 113.416 1.00 63.74 P
ATOM 3 OP1 A B 557 0.165 93.091 114.721 1.00 65.20 O
ATOM 4 OP2 A B 557 -0.488 91.690 112.672 1.00 59.76 O
ATOM 5 O5' A B 557 -2.056 93.404 113.612 1.00 63.78 O
ATOM 6 C5' A B 557 -2.577 93.742 114.910 1.00 60.81 C
ATOM 7 C4' A B 557 -2.394 95.212 115.181 1.00 60.05 C
ATOM 8 O4' A B 557 -2.820 95.992 114.033 1.00 58.73 O
ATOM 9 C3' A B 557 -3.225 95.730 116.336 1.00 62.01 C
ATOM 10 O3' A B 557 -2.613 95.486 117.594 1.00 65.94 O
ATOM 11 C2' A B 557 -3.414 97.198 115.977 1.00 60.61 C
ATOM 12 O2' A B 557 -2.304 98.024 116.263 1.00 59.05 O
ATOM 13 C1' A B 557 -3.608 97.094 114.464 1.00 58.82 C
ATOM 14 N9 A B 557 -5.003 96.804 114.119 1.00 57.89 N
ATOM 15 C8 A B 557 -5.482 95.707 113.436 1.00 58.53 C
ATOM 16 N7 A B 557 -6.782 95.699 113.294 1.00 56.66 N
ATOM 17 C5 A B 557 -7.191 96.869 113.917 1.00 55.69 C
ATOM 18 C6 A B 557 -8.453 97.435 114.102 1.00 55.20 C
ATOM 19 N6 A B 557 -9.579 96.872 113.648 1.00 53.47 N
ATOM 20 N1 A B 557 -8.524 98.612 114.769 1.00 55.47 N
ATOM 21 C2 A B 557 -7.390 99.171 115.207 1.00 53.72 C
ATOM 22 N3 A B 557 -6.140 98.735 115.089 1.00 56.42 N
ATOM 23 C4 A B 557 -6.108 97.563 114.426 1.00 56.07 C
ATOM 24 P C B 558 -3.532 95.204 118.882 1.00 66.99 P
ATOM 25 OP1 C B 558 -2.643 94.812 120.004 1.00 68.72 O
ATOM 26 OP2 C B 558 -4.629 94.294 118.469 1.00 67.10 O
ATOM 27 O5' C B 558 -4.121 96.640 119.233 1.00 66.58 O
TER
Atoms:
C4: (-6.465,92.972,110.992)
N3: (-7.450,93.771,111.536)
OP1: (-9.308,89.898,104.490)
OP2: (-7.492,91.596,105.124)
C2: (-8.789,93.764,111.228)
C1': (-10.588,92.762,109.873)
C3': (-11.176,93.627,107.741)
O5': (-9.748,91.801,106.103)
O4': (-10.779,91.673,108.977)
C5': (-11.040,91.342,106.576)
P: (-8.672,90.784,105.505)
C4': (-11.473,92.137,107.791)
C2': (-11.169,94.020,109.216)
O2': (-12.449,94.272,109.748)
N1: (-9.164,92.838,110.251)
O4: (-5.302,93.102,111.376)
O2: (-9.577,94.516,111.779)
C6: (-8.221,92.015,109.668)
C5: (-6.924,92.047,109.999)
O3': (-12.147,94.338,106.975)
N3: (-7.450,93.771,111.536)
OP1: (-9.308,89.898,104.490)
OP2: (-7.492,91.596,105.124)
C2: (-8.789,93.764,111.228)
C1': (-10.588,92.762,109.873)
C3': (-11.176,93.627,107.741)
O5': (-9.748,91.801,106.103)
O4': (-10.779,91.673,108.977)
C5': (-11.040,91.342,106.576)
P: (-8.672,90.784,105.505)
C4': (-11.473,92.137,107.791)
C2': (-11.169,94.020,109.216)
O2': (-12.449,94.272,109.748)
N1: (-9.164,92.838,110.251)
O4: (-5.302,93.102,111.376)
O2: (-9.577,94.516,111.779)
C6: (-8.221,92.015,109.668)
C5: (-6.924,92.047,109.999)
O3': (-12.147,94.338,106.975)
OP1: (0.165,93.091,114.721)
OP2: (-0.488,91.690,112.672)
C3': (-3.225,95.730,116.336)
C1': (-3.608,97.094,114.464)
C5': (-2.577,93.742,114.910)
O4': (-2.820,95.992,114.033)
C8: (-5.482,95.707,113.436)
O2': (-2.304,98.024,116.263)
C6: (-8.453,97.435,114.102)
C5: (-7.191,96.869,113.917)
C4: (-6.108,97.563,114.426)
P: (-0.532,92.980,113.416)
C4': (-2.394,95.212,115.181)
C2': (-3.414,97.198,115.977)
C2: (-7.390,99.171,115.207)
N1: (-8.524,98.612,114.769)
N3: (-6.140,98.735,115.089)
N6: (-9.579,96.872,113.648)
N7: (-6.782,95.699,113.294)
N9: (-5.003,96.804,114.119)
O5': (-2.056,93.404,113.612)
O3': (-2.613,95.486,117.594)
OP2: (-0.488,91.690,112.672)
C3': (-3.225,95.730,116.336)
C1': (-3.608,97.094,114.464)
C5': (-2.577,93.742,114.910)
O4': (-2.820,95.992,114.033)
C8: (-5.482,95.707,113.436)
O2': (-2.304,98.024,116.263)
C6: (-8.453,97.435,114.102)
C5: (-7.191,96.869,113.917)
C4: (-6.108,97.563,114.426)
P: (-0.532,92.980,113.416)
C4': (-2.394,95.212,115.181)
C2': (-3.414,97.198,115.977)
C2: (-7.390,99.171,115.207)
N1: (-8.524,98.612,114.769)
N3: (-6.140,98.735,115.089)
N6: (-9.579,96.872,113.648)
N7: (-6.782,95.699,113.294)
N9: (-5.003,96.804,114.119)
O5': (-2.056,93.404,113.612)
O3': (-2.613,95.486,117.594)
Image (generated by PyMOL):