Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0577:0557
Extra
PDB:
ATOM 1 O3' G A 576 -7.887 89.083 106.586 1.00 56.25 O
ATOM 2 P U A 577 -8.172 90.097 105.364 1.00 56.89 P
ATOM 3 OP1 U A 577 -8.721 89.344 104.210 1.00 55.73 O
ATOM 4 OP2 U A 577 -6.972 90.950 105.174 1.00 58.89 O
ATOM 5 O5' U A 577 -9.309 91.052 105.938 1.00 57.70 O
ATOM 6 C5' U A 577 -10.611 90.536 106.303 1.00 57.87 C
ATOM 7 C4' U A 577 -11.124 91.240 107.541 1.00 57.09 C
ATOM 8 O4' U A 577 -10.428 90.754 108.718 1.00 57.17 O
ATOM 9 C3' U A 577 -10.891 92.739 107.566 1.00 57.09 C
ATOM 10 O3' U A 577 -11.868 93.441 106.804 1.00 58.70 O
ATOM 11 C2' U A 577 -10.936 93.062 109.055 1.00 57.30 C
ATOM 12 O2' U A 577 -12.245 93.202 109.560 1.00 58.82 O
ATOM 13 C1' U A 577 -10.292 91.810 109.661 1.00 57.47 C
ATOM 14 N1 U A 577 -8.872 91.941 110.041 1.00 56.80 N
ATOM 15 C2 U A 577 -8.532 92.909 110.981 1.00 56.72 C
ATOM 16 O2 U A 577 -9.345 93.662 111.491 1.00 55.98 O
ATOM 17 N3 U A 577 -7.197 92.963 111.301 1.00 57.52 N
ATOM 18 C4 U A 577 -6.184 92.175 110.794 1.00 58.18 C
ATOM 19 O4 U A 577 -5.025 92.368 111.166 1.00 59.05 O
ATOM 20 C5 U A 577 -6.606 91.205 109.830 1.00 57.36 C
ATOM 21 C6 U A 577 -7.900 91.124 109.493 1.00 57.74 C
ATOM 22 P A A 578 -11.447 94.772 106.008 1.00 59.68 P
ATOM 23 OP1 A A 578 -12.606 95.233 105.208 1.00 61.11 O
ATOM 24 OP2 A A 578 -10.151 94.511 105.331 1.00 60.72 O
ATOM 25 O5' A A 578 -11.190 95.835 107.163 1.00 57.01 O
TER
ATOM 1 O3' G B 556 0.299 93.789 112.412 1.00 46.28 O
ATOM 2 P A B 557 -0.118 92.565 113.367 1.00 48.91 P
ATOM 3 OP1 A B 557 0.532 92.828 114.676 1.00 48.13 O
ATOM 4 OP2 A B 557 0.118 91.268 112.679 1.00 46.49 O
ATOM 5 O5' A B 557 -1.692 92.752 113.518 1.00 50.18 O
ATOM 6 C5' A B 557 -2.280 93.113 114.778 1.00 51.23 C
ATOM 7 C4' A B 557 -2.157 94.599 115.009 1.00 51.01 C
ATOM 8 O4' A B 557 -2.629 95.326 113.848 1.00 50.79 O
ATOM 9 C3' A B 557 -3.011 95.100 116.152 1.00 52.65 C
ATOM 10 O3' A B 557 -2.379 94.907 117.407 1.00 55.68 O
ATOM 11 C2' A B 557 -3.261 96.553 115.774 1.00 52.21 C
ATOM 12 O2' A B 557 -2.196 97.429 116.075 1.00 51.96 O
ATOM 13 C1' A B 557 -3.428 96.425 114.259 1.00 51.15 C
ATOM 14 N9 A B 557 -4.810 96.121 113.891 1.00 51.29 N
ATOM 15 C8 A B 557 -5.267 95.021 113.200 1.00 51.52 C
ATOM 16 N7 A B 557 -6.566 95.000 113.042 1.00 51.69 N
ATOM 17 C5 A B 557 -6.996 96.165 113.663 1.00 49.70 C
ATOM 18 C6 A B 557 -8.267 96.718 113.839 1.00 49.27 C
ATOM 19 N6 A B 557 -9.384 96.146 113.386 1.00 48.17 N
ATOM 20 N1 A B 557 -8.355 97.894 114.502 1.00 50.59 N
ATOM 21 C2 A B 557 -7.228 98.466 114.948 1.00 48.42 C
ATOM 22 N3 A B 557 -5.974 98.042 114.842 1.00 49.66 N
ATOM 23 C4 A B 557 -5.925 96.870 114.183 1.00 50.06 C
ATOM 24 P C B 558 -3.271 94.540 118.690 1.00 57.26 P
ATOM 25 OP1 C B 558 -2.347 94.104 119.769 1.00 58.67 O
ATOM 26 OP2 C B 558 -4.367 93.634 118.251 1.00 56.23 O
ATOM 27 O5' C B 558 -3.894 95.941 119.113 1.00 55.92 O
TER
ATOM 2 P U A 577 -8.172 90.097 105.364 1.00 56.89 P
ATOM 3 OP1 U A 577 -8.721 89.344 104.210 1.00 55.73 O
ATOM 4 OP2 U A 577 -6.972 90.950 105.174 1.00 58.89 O
ATOM 5 O5' U A 577 -9.309 91.052 105.938 1.00 57.70 O
ATOM 6 C5' U A 577 -10.611 90.536 106.303 1.00 57.87 C
ATOM 7 C4' U A 577 -11.124 91.240 107.541 1.00 57.09 C
ATOM 8 O4' U A 577 -10.428 90.754 108.718 1.00 57.17 O
ATOM 9 C3' U A 577 -10.891 92.739 107.566 1.00 57.09 C
ATOM 10 O3' U A 577 -11.868 93.441 106.804 1.00 58.70 O
ATOM 11 C2' U A 577 -10.936 93.062 109.055 1.00 57.30 C
ATOM 12 O2' U A 577 -12.245 93.202 109.560 1.00 58.82 O
ATOM 13 C1' U A 577 -10.292 91.810 109.661 1.00 57.47 C
ATOM 14 N1 U A 577 -8.872 91.941 110.041 1.00 56.80 N
ATOM 15 C2 U A 577 -8.532 92.909 110.981 1.00 56.72 C
ATOM 16 O2 U A 577 -9.345 93.662 111.491 1.00 55.98 O
ATOM 17 N3 U A 577 -7.197 92.963 111.301 1.00 57.52 N
ATOM 18 C4 U A 577 -6.184 92.175 110.794 1.00 58.18 C
ATOM 19 O4 U A 577 -5.025 92.368 111.166 1.00 59.05 O
ATOM 20 C5 U A 577 -6.606 91.205 109.830 1.00 57.36 C
ATOM 21 C6 U A 577 -7.900 91.124 109.493 1.00 57.74 C
ATOM 22 P A A 578 -11.447 94.772 106.008 1.00 59.68 P
ATOM 23 OP1 A A 578 -12.606 95.233 105.208 1.00 61.11 O
ATOM 24 OP2 A A 578 -10.151 94.511 105.331 1.00 60.72 O
ATOM 25 O5' A A 578 -11.190 95.835 107.163 1.00 57.01 O
TER
ATOM 1 O3' G B 556 0.299 93.789 112.412 1.00 46.28 O
ATOM 2 P A B 557 -0.118 92.565 113.367 1.00 48.91 P
ATOM 3 OP1 A B 557 0.532 92.828 114.676 1.00 48.13 O
ATOM 4 OP2 A B 557 0.118 91.268 112.679 1.00 46.49 O
ATOM 5 O5' A B 557 -1.692 92.752 113.518 1.00 50.18 O
ATOM 6 C5' A B 557 -2.280 93.113 114.778 1.00 51.23 C
ATOM 7 C4' A B 557 -2.157 94.599 115.009 1.00 51.01 C
ATOM 8 O4' A B 557 -2.629 95.326 113.848 1.00 50.79 O
ATOM 9 C3' A B 557 -3.011 95.100 116.152 1.00 52.65 C
ATOM 10 O3' A B 557 -2.379 94.907 117.407 1.00 55.68 O
ATOM 11 C2' A B 557 -3.261 96.553 115.774 1.00 52.21 C
ATOM 12 O2' A B 557 -2.196 97.429 116.075 1.00 51.96 O
ATOM 13 C1' A B 557 -3.428 96.425 114.259 1.00 51.15 C
ATOM 14 N9 A B 557 -4.810 96.121 113.891 1.00 51.29 N
ATOM 15 C8 A B 557 -5.267 95.021 113.200 1.00 51.52 C
ATOM 16 N7 A B 557 -6.566 95.000 113.042 1.00 51.69 N
ATOM 17 C5 A B 557 -6.996 96.165 113.663 1.00 49.70 C
ATOM 18 C6 A B 557 -8.267 96.718 113.839 1.00 49.27 C
ATOM 19 N6 A B 557 -9.384 96.146 113.386 1.00 48.17 N
ATOM 20 N1 A B 557 -8.355 97.894 114.502 1.00 50.59 N
ATOM 21 C2 A B 557 -7.228 98.466 114.948 1.00 48.42 C
ATOM 22 N3 A B 557 -5.974 98.042 114.842 1.00 49.66 N
ATOM 23 C4 A B 557 -5.925 96.870 114.183 1.00 50.06 C
ATOM 24 P C B 558 -3.271 94.540 118.690 1.00 57.26 P
ATOM 25 OP1 C B 558 -2.347 94.104 119.769 1.00 58.67 O
ATOM 26 OP2 C B 558 -4.367 93.634 118.251 1.00 56.23 O
ATOM 27 O5' C B 558 -3.894 95.941 119.113 1.00 55.92 O
TER
Atoms:
C4: (-6.184,92.175,110.794)
N3: (-7.197,92.963,111.301)
OP1: (-8.721,89.344,104.210)
OP2: (-6.972,90.950,105.174)
C2: (-8.532,92.909,110.981)
C1': (-10.292,91.810,109.661)
C3': (-10.891,92.739,107.566)
O5': (-9.309,91.052,105.938)
O4': (-10.428,90.754,108.718)
C5': (-10.611,90.536,106.303)
P: (-8.172,90.097,105.364)
C4': (-11.124,91.240,107.541)
C2': (-10.936,93.062,109.055)
O2': (-12.245,93.202,109.560)
N1: (-8.872,91.941,110.041)
O4: (-5.025,92.368,111.166)
O2: (-9.345,93.662,111.491)
C6: (-7.900,91.124,109.493)
C5: (-6.606,91.205,109.830)
O3': (-11.868,93.441,106.804)
N3: (-7.197,92.963,111.301)
OP1: (-8.721,89.344,104.210)
OP2: (-6.972,90.950,105.174)
C2: (-8.532,92.909,110.981)
C1': (-10.292,91.810,109.661)
C3': (-10.891,92.739,107.566)
O5': (-9.309,91.052,105.938)
O4': (-10.428,90.754,108.718)
C5': (-10.611,90.536,106.303)
P: (-8.172,90.097,105.364)
C4': (-11.124,91.240,107.541)
C2': (-10.936,93.062,109.055)
O2': (-12.245,93.202,109.560)
N1: (-8.872,91.941,110.041)
O4: (-5.025,92.368,111.166)
O2: (-9.345,93.662,111.491)
C6: (-7.900,91.124,109.493)
C5: (-6.606,91.205,109.830)
O3': (-11.868,93.441,106.804)
OP1: (0.532,92.828,114.676)
OP2: (0.118,91.268,112.679)
C3': (-3.011,95.100,116.152)
C1': (-3.428,96.425,114.259)
C5': (-2.280,93.113,114.778)
O4': (-2.629,95.326,113.848)
C8: (-5.267,95.021,113.200)
O2': (-2.196,97.429,116.075)
C6: (-8.267,96.718,113.839)
C5: (-6.996,96.165,113.663)
C4: (-5.925,96.870,114.183)
P: (-0.118,92.565,113.367)
C4': (-2.157,94.599,115.009)
C2': (-3.261,96.553,115.774)
C2: (-7.228,98.466,114.948)
N1: (-8.355,97.894,114.502)
N3: (-5.974,98.042,114.842)
N6: (-9.384,96.146,113.386)
N7: (-6.566,95.000,113.042)
N9: (-4.810,96.121,113.891)
O5': (-1.692,92.752,113.518)
O3': (-2.379,94.907,117.407)
OP2: (0.118,91.268,112.679)
C3': (-3.011,95.100,116.152)
C1': (-3.428,96.425,114.259)
C5': (-2.280,93.113,114.778)
O4': (-2.629,95.326,113.848)
C8: (-5.267,95.021,113.200)
O2': (-2.196,97.429,116.075)
C6: (-8.267,96.718,113.839)
C5: (-6.996,96.165,113.663)
C4: (-5.925,96.870,114.183)
P: (-0.118,92.565,113.367)
C4': (-2.157,94.599,115.009)
C2': (-3.261,96.553,115.774)
C2: (-7.228,98.466,114.948)
N1: (-8.355,97.894,114.502)
N3: (-5.974,98.042,114.842)
N6: (-9.384,96.146,113.386)
N7: (-6.566,95.000,113.042)
N9: (-4.810,96.121,113.891)
O5': (-1.692,92.752,113.518)
O3': (-2.379,94.907,117.407)
Image (generated by PyMOL):