Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2020:A2025
Extra
PDB:
ATOM 1 O3' G A2019 -67.067 114.964 180.909 1.00 0.01 O
ATOM 2 P U A2020 -66.861 116.334 180.111 1.00 2.14 P
ATOM 3 OP1 U A2020 -68.137 116.641 179.405 1.00 2.14 O
ATOM 4 OP2 U A2020 -65.617 116.193 179.316 1.00 2.14 O
ATOM 5 O5' U A2020 -66.625 117.382 181.270 1.00 2.14 O
ATOM 6 C5' U A2020 -67.708 117.928 181.982 1.00 2.14 C
ATOM 7 C4' U A2020 -67.222 118.995 182.896 1.00 2.14 C
ATOM 8 O4' U A2020 -66.134 118.478 183.672 1.00 2.14 O
ATOM 9 C3' U A2020 -66.640 120.203 182.211 1.00 2.14 C
ATOM 10 O3' U A2020 -67.631 121.118 181.839 1.00 2.14 O
ATOM 11 C2' U A2020 -65.684 120.749 183.238 1.00 2.14 C
ATOM 12 O2' U A2020 -66.386 121.510 184.208 1.00 2.14 O
ATOM 13 C1' U A2020 -65.191 119.478 183.900 1.00 2.14 C
ATOM 14 N1 U A2020 -63.914 119.022 183.385 1.00 2.03 N
ATOM 15 C2 U A2020 -62.826 119.657 183.881 1.00 2.03 C
ATOM 16 O2 U A2020 -62.948 120.590 184.642 1.00 2.03 O
ATOM 17 N3 U A2020 -61.629 119.161 183.448 1.00 2.03 N
ATOM 18 C4 U A2020 -61.417 118.084 182.596 1.00 2.03 C
ATOM 19 O4 U A2020 -60.257 117.734 182.284 1.00 2.03 O
ATOM 20 C5 U A2020 -62.635 117.460 182.149 1.00 2.03 C
ATOM 21 C6 U A2020 -63.817 117.933 182.567 1.00 2.03 C
ATOM 22 P G A2021 -67.505 121.915 180.469 1.00 0.01 P
ATOM 23 OP1 G A2021 -68.677 122.842 180.401 1.00 0.01 O
ATOM 24 OP2 G A2021 -67.297 120.913 179.379 1.00 0.01 O
ATOM 25 O5' G A2021 -66.190 122.740 180.700 1.00 0.01 O
TER
ATOM 1 O3' G B2024 -55.739 117.774 178.387 1.00 0.21 O
ATOM 2 P A B2025 -56.081 117.854 179.946 1.00 0.01 P
ATOM 3 OP1 A B2025 -55.812 116.511 180.520 1.00 0.01 O
ATOM 4 OP2 A B2025 -57.425 118.415 180.069 1.00 0.01 O
ATOM 5 O5' A B2025 -55.018 118.877 180.504 1.00 0.01 O
ATOM 6 C5' A B2025 -53.774 118.405 181.009 1.00 0.01 C
ATOM 7 C4' A B2025 -53.678 118.524 182.517 1.00 0.01 C
ATOM 8 O4' A B2025 -54.681 119.455 183.009 1.00 0.01 O
ATOM 9 C3' A B2025 -53.892 117.228 183.299 1.00 0.01 C
ATOM 10 O3' A B2025 -53.070 117.253 184.451 1.00 0.01 O
ATOM 11 C2' A B2025 -55.333 117.358 183.748 1.00 0.01 C
ATOM 12 O2' A B2025 -55.679 116.560 184.869 1.00 0.01 O
ATOM 13 C1' A B2025 -55.360 118.843 184.078 1.00 0.01 C
ATOM 14 N9 A B2025 -56.698 119.426 184.229 1.00 0.01 N
ATOM 15 C8 A B2025 -57.870 119.023 183.672 1.00 0.01 C
ATOM 16 N7 A B2025 -58.884 119.732 184.083 1.00 0.01 N
ATOM 17 C5 A B2025 -58.366 120.646 184.972 1.00 0.01 C
ATOM 18 C6 A B2025 -58.932 121.669 185.739 1.00 0.01 C
ATOM 19 N6 A B2025 -60.219 121.965 185.762 1.00 0.01 N
ATOM 20 N1 A B2025 -58.154 122.401 186.530 1.00 0.01 N
ATOM 21 C2 A B2025 -56.873 122.095 186.546 1.00 0.01 C
ATOM 22 N3 A B2025 -56.230 121.150 185.876 1.00 0.01 N
ATOM 23 C4 A B2025 -57.035 120.448 185.087 1.00 0.01 C
ATOM 24 P U B2026 -51.517 116.899 184.360 1.00 0.01 P
ATOM 25 OP1 U B2026 -50.811 118.092 183.810 1.00 0.01 O
ATOM 26 OP2 U B2026 -51.416 115.610 183.638 1.00 0.01 O
ATOM 27 O5' U B2026 -51.119 116.701 185.888 1.00 0.01 O
TER
ATOM 2 P U A2020 -66.861 116.334 180.111 1.00 2.14 P
ATOM 3 OP1 U A2020 -68.137 116.641 179.405 1.00 2.14 O
ATOM 4 OP2 U A2020 -65.617 116.193 179.316 1.00 2.14 O
ATOM 5 O5' U A2020 -66.625 117.382 181.270 1.00 2.14 O
ATOM 6 C5' U A2020 -67.708 117.928 181.982 1.00 2.14 C
ATOM 7 C4' U A2020 -67.222 118.995 182.896 1.00 2.14 C
ATOM 8 O4' U A2020 -66.134 118.478 183.672 1.00 2.14 O
ATOM 9 C3' U A2020 -66.640 120.203 182.211 1.00 2.14 C
ATOM 10 O3' U A2020 -67.631 121.118 181.839 1.00 2.14 O
ATOM 11 C2' U A2020 -65.684 120.749 183.238 1.00 2.14 C
ATOM 12 O2' U A2020 -66.386 121.510 184.208 1.00 2.14 O
ATOM 13 C1' U A2020 -65.191 119.478 183.900 1.00 2.14 C
ATOM 14 N1 U A2020 -63.914 119.022 183.385 1.00 2.03 N
ATOM 15 C2 U A2020 -62.826 119.657 183.881 1.00 2.03 C
ATOM 16 O2 U A2020 -62.948 120.590 184.642 1.00 2.03 O
ATOM 17 N3 U A2020 -61.629 119.161 183.448 1.00 2.03 N
ATOM 18 C4 U A2020 -61.417 118.084 182.596 1.00 2.03 C
ATOM 19 O4 U A2020 -60.257 117.734 182.284 1.00 2.03 O
ATOM 20 C5 U A2020 -62.635 117.460 182.149 1.00 2.03 C
ATOM 21 C6 U A2020 -63.817 117.933 182.567 1.00 2.03 C
ATOM 22 P G A2021 -67.505 121.915 180.469 1.00 0.01 P
ATOM 23 OP1 G A2021 -68.677 122.842 180.401 1.00 0.01 O
ATOM 24 OP2 G A2021 -67.297 120.913 179.379 1.00 0.01 O
ATOM 25 O5' G A2021 -66.190 122.740 180.700 1.00 0.01 O
TER
ATOM 1 O3' G B2024 -55.739 117.774 178.387 1.00 0.21 O
ATOM 2 P A B2025 -56.081 117.854 179.946 1.00 0.01 P
ATOM 3 OP1 A B2025 -55.812 116.511 180.520 1.00 0.01 O
ATOM 4 OP2 A B2025 -57.425 118.415 180.069 1.00 0.01 O
ATOM 5 O5' A B2025 -55.018 118.877 180.504 1.00 0.01 O
ATOM 6 C5' A B2025 -53.774 118.405 181.009 1.00 0.01 C
ATOM 7 C4' A B2025 -53.678 118.524 182.517 1.00 0.01 C
ATOM 8 O4' A B2025 -54.681 119.455 183.009 1.00 0.01 O
ATOM 9 C3' A B2025 -53.892 117.228 183.299 1.00 0.01 C
ATOM 10 O3' A B2025 -53.070 117.253 184.451 1.00 0.01 O
ATOM 11 C2' A B2025 -55.333 117.358 183.748 1.00 0.01 C
ATOM 12 O2' A B2025 -55.679 116.560 184.869 1.00 0.01 O
ATOM 13 C1' A B2025 -55.360 118.843 184.078 1.00 0.01 C
ATOM 14 N9 A B2025 -56.698 119.426 184.229 1.00 0.01 N
ATOM 15 C8 A B2025 -57.870 119.023 183.672 1.00 0.01 C
ATOM 16 N7 A B2025 -58.884 119.732 184.083 1.00 0.01 N
ATOM 17 C5 A B2025 -58.366 120.646 184.972 1.00 0.01 C
ATOM 18 C6 A B2025 -58.932 121.669 185.739 1.00 0.01 C
ATOM 19 N6 A B2025 -60.219 121.965 185.762 1.00 0.01 N
ATOM 20 N1 A B2025 -58.154 122.401 186.530 1.00 0.01 N
ATOM 21 C2 A B2025 -56.873 122.095 186.546 1.00 0.01 C
ATOM 22 N3 A B2025 -56.230 121.150 185.876 1.00 0.01 N
ATOM 23 C4 A B2025 -57.035 120.448 185.087 1.00 0.01 C
ATOM 24 P U B2026 -51.517 116.899 184.360 1.00 0.01 P
ATOM 25 OP1 U B2026 -50.811 118.092 183.810 1.00 0.01 O
ATOM 26 OP2 U B2026 -51.416 115.610 183.638 1.00 0.01 O
ATOM 27 O5' U B2026 -51.119 116.701 185.888 1.00 0.01 O
TER
Atoms:
C4: (-61.417,118.084,182.596)
N3: (-61.629,119.161,183.448)
OP1: (-68.137,116.641,179.405)
OP2: (-65.617,116.193,179.316)
C2: (-62.826,119.657,183.881)
C1': (-65.191,119.478,183.900)
C3': (-66.640,120.203,182.211)
O5': (-66.625,117.382,181.270)
O4': (-66.134,118.478,183.672)
C5': (-67.708,117.928,181.982)
P: (-66.861,116.334,180.111)
C4': (-67.222,118.995,182.896)
C2': (-65.684,120.749,183.238)
O2': (-66.386,121.510,184.208)
N1: (-63.914,119.022,183.385)
O4: (-60.257,117.734,182.284)
O2: (-62.948,120.590,184.642)
C6: (-63.817,117.933,182.567)
C5: (-62.635,117.460,182.149)
O3': (-67.631,121.118,181.839)
N3: (-61.629,119.161,183.448)
OP1: (-68.137,116.641,179.405)
OP2: (-65.617,116.193,179.316)
C2: (-62.826,119.657,183.881)
C1': (-65.191,119.478,183.900)
C3': (-66.640,120.203,182.211)
O5': (-66.625,117.382,181.270)
O4': (-66.134,118.478,183.672)
C5': (-67.708,117.928,181.982)
P: (-66.861,116.334,180.111)
C4': (-67.222,118.995,182.896)
C2': (-65.684,120.749,183.238)
O2': (-66.386,121.510,184.208)
N1: (-63.914,119.022,183.385)
O4: (-60.257,117.734,182.284)
O2: (-62.948,120.590,184.642)
C6: (-63.817,117.933,182.567)
C5: (-62.635,117.460,182.149)
O3': (-67.631,121.118,181.839)
OP1: (-55.812,116.511,180.520)
OP2: (-57.425,118.415,180.069)
C3': (-53.892,117.228,183.299)
C1': (-55.360,118.843,184.078)
C5': (-53.774,118.405,181.009)
O4': (-54.681,119.455,183.009)
C8: (-57.870,119.023,183.672)
O2': (-55.679,116.560,184.869)
C6: (-58.932,121.669,185.739)
C5: (-58.366,120.646,184.972)
C4: (-57.035,120.448,185.087)
P: (-56.081,117.854,179.946)
C4': (-53.678,118.524,182.517)
C2': (-55.333,117.358,183.748)
C2: (-56.873,122.095,186.546)
N1: (-58.154,122.401,186.530)
N3: (-56.230,121.150,185.876)
N6: (-60.219,121.965,185.762)
N7: (-58.884,119.732,184.083)
N9: (-56.698,119.426,184.229)
O5': (-55.018,118.877,180.504)
O3': (-53.070,117.253,184.451)
OP2: (-57.425,118.415,180.069)
C3': (-53.892,117.228,183.299)
C1': (-55.360,118.843,184.078)
C5': (-53.774,118.405,181.009)
O4': (-54.681,119.455,183.009)
C8: (-57.870,119.023,183.672)
O2': (-55.679,116.560,184.869)
C6: (-58.932,121.669,185.739)
C5: (-58.366,120.646,184.972)
C4: (-57.035,120.448,185.087)
P: (-56.081,117.854,179.946)
C4': (-53.678,118.524,182.517)
C2': (-55.333,117.358,183.748)
C2: (-56.873,122.095,186.546)
N1: (-58.154,122.401,186.530)
N3: (-56.230,121.150,185.876)
N6: (-60.219,121.965,185.762)
N7: (-58.884,119.732,184.083)
N9: (-56.698,119.426,184.229)
O5': (-55.018,118.877,180.504)
O3': (-53.070,117.253,184.451)
Image (generated by PyMOL):