Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1231:A1235
Extra
PDB:
ATOM 1 O3' G A1230 15.249 -84.764 0.848 1.00 39.78 O
ATOM 2 P U A1231 15.784 -86.029 0.025 1.00 44.06 P
ATOM 3 OP1 U A1231 14.619 -86.666 -0.612 1.00 56.56 O
ATOM 4 OP2 U A1231 16.610 -86.832 0.958 1.00 51.07 O
ATOM 5 O5' U A1231 16.696 -85.379 -1.084 1.00 66.66 O
ATOM 6 C5' U A1231 16.150 -84.956 -2.312 1.00 67.69 C
ATOM 7 C4' U A1231 17.225 -84.449 -3.224 1.00 64.73 C
ATOM 8 O4' U A1231 18.054 -83.507 -2.514 1.00 62.81 O
ATOM 9 C3' U A1231 18.196 -85.489 -3.719 1.00 58.72 C
ATOM 10 O3' U A1231 17.704 -86.179 -4.833 1.00 57.64 O
ATOM 11 C2' U A1231 19.437 -84.684 -4.023 1.00 60.25 C
ATOM 12 O2' U A1231 19.327 -84.076 -5.285 1.00 76.20 O
ATOM 13 C1' U A1231 19.376 -83.598 -2.961 1.00 57.11 C
ATOM 14 N1 U A1231 20.225 -83.916 -1.830 1.00 54.32 N
ATOM 15 C2 U A1231 21.512 -83.512 -1.976 1.00 55.01 C
ATOM 16 O2 U A1231 21.859 -82.927 -2.975 1.00 59.52 O
ATOM 17 N3 U A1231 22.340 -83.813 -0.940 1.00 51.18 N
ATOM 18 C4 U A1231 21.983 -84.493 0.195 1.00 53.36 C
ATOM 19 O4 U A1231 22.836 -84.704 1.047 1.00 59.42 O
ATOM 20 C5 U A1231 20.614 -84.885 0.273 1.00 52.86 C
ATOM 21 C6 U A1231 19.796 -84.593 -0.731 1.00 56.14 C
ATOM 22 P G A1232 17.529 -87.753 -4.764 1.00 42.63 P
ATOM 23 OP1 G A1232 16.566 -88.134 -5.821 1.00 77.36 O
ATOM 24 OP2 G A1232 17.227 -88.105 -3.343 1.00 71.60 O
ATOM 25 O5' G A1232 18.961 -88.274 -5.144 1.00 54.40 O
TER
ATOM 1 O3' G B1234 29.672 -88.954 0.032 1.00 45.01 O
ATOM 2 P A B1235 29.028 -88.172 1.279 1.00 49.51 P
ATOM 3 OP1 A B1235 29.980 -88.321 2.423 1.00 51.11 O
ATOM 4 OP2 A B1235 27.643 -88.647 1.451 1.00 49.87 O
ATOM 5 O5' A B1235 29.030 -86.680 0.778 1.00 55.91 O
ATOM 6 C5' A B1235 30.253 -86.038 0.493 1.00 58.85 C
ATOM 7 C4' A B1235 30.146 -84.548 0.608 1.00 50.69 C
ATOM 8 O4' A B1235 29.261 -84.059 -0.423 1.00 44.78 O
ATOM 9 C3' A B1235 29.609 -84.016 1.943 1.00 39.92 C
ATOM 10 O3' A B1235 30.428 -82.948 2.404 1.00 49.97 O
ATOM 11 C2' A B1235 28.248 -83.449 1.576 1.00 44.31 C
ATOM 12 O2' A B1235 27.883 -82.336 2.347 1.00 51.30 O
ATOM 13 C1' A B1235 28.454 -83.063 0.120 1.00 45.84 C
ATOM 14 N9 A B1235 27.233 -82.982 -0.664 1.00 32.82 N
ATOM 15 C8 A B1235 26.021 -83.521 -0.443 1.00 43.31 C
ATOM 16 N7 A B1235 25.139 -83.184 -1.345 1.00 46.32 N
ATOM 17 C5 A B1235 25.818 -82.360 -2.210 1.00 38.77 C
ATOM 18 C6 A B1235 25.450 -81.675 -3.380 1.00 35.38 C
ATOM 19 N6 A B1235 24.257 -81.681 -3.953 1.00 38.55 N
ATOM 20 N1 A B1235 26.379 -80.950 -3.988 1.00 38.62 N
ATOM 21 C2 A B1235 27.591 -80.904 -3.438 1.00 38.61 C
ATOM 22 N3 A B1235 28.057 -81.495 -2.347 1.00 40.42 N
ATOM 23 C4 A B1235 27.107 -82.231 -1.782 1.00 37.12 C
ATOM 24 P A B1236 31.726 -83.236 3.310 1.00 52.17 P
ATOM 25 OP1 A B1236 32.910 -83.297 2.382 1.00 32.02 O
ATOM 26 OP2 A B1236 31.414 -84.411 4.159 1.00 61.60 O
ATOM 27 O5' A B1236 31.805 -81.936 4.213 1.00 33.69 O
TER
ATOM 2 P U A1231 15.784 -86.029 0.025 1.00 44.06 P
ATOM 3 OP1 U A1231 14.619 -86.666 -0.612 1.00 56.56 O
ATOM 4 OP2 U A1231 16.610 -86.832 0.958 1.00 51.07 O
ATOM 5 O5' U A1231 16.696 -85.379 -1.084 1.00 66.66 O
ATOM 6 C5' U A1231 16.150 -84.956 -2.312 1.00 67.69 C
ATOM 7 C4' U A1231 17.225 -84.449 -3.224 1.00 64.73 C
ATOM 8 O4' U A1231 18.054 -83.507 -2.514 1.00 62.81 O
ATOM 9 C3' U A1231 18.196 -85.489 -3.719 1.00 58.72 C
ATOM 10 O3' U A1231 17.704 -86.179 -4.833 1.00 57.64 O
ATOM 11 C2' U A1231 19.437 -84.684 -4.023 1.00 60.25 C
ATOM 12 O2' U A1231 19.327 -84.076 -5.285 1.00 76.20 O
ATOM 13 C1' U A1231 19.376 -83.598 -2.961 1.00 57.11 C
ATOM 14 N1 U A1231 20.225 -83.916 -1.830 1.00 54.32 N
ATOM 15 C2 U A1231 21.512 -83.512 -1.976 1.00 55.01 C
ATOM 16 O2 U A1231 21.859 -82.927 -2.975 1.00 59.52 O
ATOM 17 N3 U A1231 22.340 -83.813 -0.940 1.00 51.18 N
ATOM 18 C4 U A1231 21.983 -84.493 0.195 1.00 53.36 C
ATOM 19 O4 U A1231 22.836 -84.704 1.047 1.00 59.42 O
ATOM 20 C5 U A1231 20.614 -84.885 0.273 1.00 52.86 C
ATOM 21 C6 U A1231 19.796 -84.593 -0.731 1.00 56.14 C
ATOM 22 P G A1232 17.529 -87.753 -4.764 1.00 42.63 P
ATOM 23 OP1 G A1232 16.566 -88.134 -5.821 1.00 77.36 O
ATOM 24 OP2 G A1232 17.227 -88.105 -3.343 1.00 71.60 O
ATOM 25 O5' G A1232 18.961 -88.274 -5.144 1.00 54.40 O
TER
ATOM 1 O3' G B1234 29.672 -88.954 0.032 1.00 45.01 O
ATOM 2 P A B1235 29.028 -88.172 1.279 1.00 49.51 P
ATOM 3 OP1 A B1235 29.980 -88.321 2.423 1.00 51.11 O
ATOM 4 OP2 A B1235 27.643 -88.647 1.451 1.00 49.87 O
ATOM 5 O5' A B1235 29.030 -86.680 0.778 1.00 55.91 O
ATOM 6 C5' A B1235 30.253 -86.038 0.493 1.00 58.85 C
ATOM 7 C4' A B1235 30.146 -84.548 0.608 1.00 50.69 C
ATOM 8 O4' A B1235 29.261 -84.059 -0.423 1.00 44.78 O
ATOM 9 C3' A B1235 29.609 -84.016 1.943 1.00 39.92 C
ATOM 10 O3' A B1235 30.428 -82.948 2.404 1.00 49.97 O
ATOM 11 C2' A B1235 28.248 -83.449 1.576 1.00 44.31 C
ATOM 12 O2' A B1235 27.883 -82.336 2.347 1.00 51.30 O
ATOM 13 C1' A B1235 28.454 -83.063 0.120 1.00 45.84 C
ATOM 14 N9 A B1235 27.233 -82.982 -0.664 1.00 32.82 N
ATOM 15 C8 A B1235 26.021 -83.521 -0.443 1.00 43.31 C
ATOM 16 N7 A B1235 25.139 -83.184 -1.345 1.00 46.32 N
ATOM 17 C5 A B1235 25.818 -82.360 -2.210 1.00 38.77 C
ATOM 18 C6 A B1235 25.450 -81.675 -3.380 1.00 35.38 C
ATOM 19 N6 A B1235 24.257 -81.681 -3.953 1.00 38.55 N
ATOM 20 N1 A B1235 26.379 -80.950 -3.988 1.00 38.62 N
ATOM 21 C2 A B1235 27.591 -80.904 -3.438 1.00 38.61 C
ATOM 22 N3 A B1235 28.057 -81.495 -2.347 1.00 40.42 N
ATOM 23 C4 A B1235 27.107 -82.231 -1.782 1.00 37.12 C
ATOM 24 P A B1236 31.726 -83.236 3.310 1.00 52.17 P
ATOM 25 OP1 A B1236 32.910 -83.297 2.382 1.00 32.02 O
ATOM 26 OP2 A B1236 31.414 -84.411 4.159 1.00 61.60 O
ATOM 27 O5' A B1236 31.805 -81.936 4.213 1.00 33.69 O
TER
Atoms:
C4: (21.983,-84.493,0.195)
N3: (22.340,-83.813,-0.940)
OP1: (14.619,-86.666,-0.612)
OP2: (16.610,-86.832,0.958)
C2: (21.512,-83.512,-1.976)
C1': (19.376,-83.598,-2.961)
C3': (18.196,-85.489,-3.719)
O5': (16.696,-85.379,-1.084)
O4': (18.054,-83.507,-2.514)
C5': (16.150,-84.956,-2.312)
P: (15.784,-86.029,0.025)
C4': (17.225,-84.449,-3.224)
C2': (19.437,-84.684,-4.023)
O2': (19.327,-84.076,-5.285)
N1: (20.225,-83.916,-1.830)
O4: (22.836,-84.704,1.047)
O2: (21.859,-82.927,-2.975)
C6: (19.796,-84.593,-0.731)
C5: (20.614,-84.885,0.273)
O3': (17.704,-86.179,-4.833)
N3: (22.340,-83.813,-0.940)
OP1: (14.619,-86.666,-0.612)
OP2: (16.610,-86.832,0.958)
C2: (21.512,-83.512,-1.976)
C1': (19.376,-83.598,-2.961)
C3': (18.196,-85.489,-3.719)
O5': (16.696,-85.379,-1.084)
O4': (18.054,-83.507,-2.514)
C5': (16.150,-84.956,-2.312)
P: (15.784,-86.029,0.025)
C4': (17.225,-84.449,-3.224)
C2': (19.437,-84.684,-4.023)
O2': (19.327,-84.076,-5.285)
N1: (20.225,-83.916,-1.830)
O4: (22.836,-84.704,1.047)
O2: (21.859,-82.927,-2.975)
C6: (19.796,-84.593,-0.731)
C5: (20.614,-84.885,0.273)
O3': (17.704,-86.179,-4.833)
OP1: (29.980,-88.321,2.423)
OP2: (27.643,-88.647,1.451)
C3': (29.609,-84.016,1.943)
C1': (28.454,-83.063,0.120)
C5': (30.253,-86.038,0.493)
O4': (29.261,-84.059,-0.423)
C8: (26.021,-83.521,-0.443)
O2': (27.883,-82.336,2.347)
C6: (25.450,-81.675,-3.380)
C5: (25.818,-82.360,-2.210)
C4: (27.107,-82.231,-1.782)
P: (29.028,-88.172,1.279)
C4': (30.146,-84.548,0.608)
C2': (28.248,-83.449,1.576)
C2: (27.591,-80.904,-3.438)
N1: (26.379,-80.950,-3.988)
N3: (28.057,-81.495,-2.347)
N6: (24.257,-81.681,-3.953)
N7: (25.139,-83.184,-1.345)
N9: (27.233,-82.982,-0.664)
O5': (29.030,-86.680,0.778)
O3': (30.428,-82.948,2.404)
OP2: (27.643,-88.647,1.451)
C3': (29.609,-84.016,1.943)
C1': (28.454,-83.063,0.120)
C5': (30.253,-86.038,0.493)
O4': (29.261,-84.059,-0.423)
C8: (26.021,-83.521,-0.443)
O2': (27.883,-82.336,2.347)
C6: (25.450,-81.675,-3.380)
C5: (25.818,-82.360,-2.210)
C4: (27.107,-82.231,-1.782)
P: (29.028,-88.172,1.279)
C4': (30.146,-84.548,0.608)
C2': (28.248,-83.449,1.576)
C2: (27.591,-80.904,-3.438)
N1: (26.379,-80.950,-3.988)
N3: (28.057,-81.495,-2.347)
N6: (24.257,-81.681,-3.953)
N7: (25.139,-83.184,-1.345)
N9: (27.233,-82.982,-0.664)
O5': (29.030,-86.680,0.778)
O3': (30.428,-82.948,2.404)
Image (generated by PyMOL):