Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1026:A1097
Extra
PDB:
ATOM 1 O3' C A1025 129.460 -87.134 22.297 1.00 60.73 O
ATOM 2 P U A1026 129.053 -87.013 23.850 1.00 64.23 P
ATOM 3 OP1 U A1026 129.937 -85.976 24.438 1.00 54.93 O
ATOM 4 OP2 U A1026 128.990 -88.380 24.447 1.00 54.42 O
ATOM 5 O5' U A1026 127.577 -86.438 23.809 1.00 58.99 O
ATOM 6 C5' U A1026 127.281 -85.376 22.931 1.00 59.97 C
ATOM 7 C4' U A1026 125.829 -85.369 22.599 1.00 53.66 C
ATOM 8 O4' U A1026 125.490 -86.488 21.743 1.00 55.84 O
ATOM 9 C3' U A1026 124.905 -85.493 23.785 1.00 54.54 C
ATOM 10 O3' U A1026 124.757 -84.247 24.458 1.00 55.65 O
ATOM 11 C2' U A1026 123.621 -85.976 23.125 1.00 55.08 C
ATOM 12 O2' U A1026 122.974 -84.884 22.518 1.00 57.59 O
ATOM 13 C1' U A1026 124.161 -86.883 22.016 1.00 55.70 C
ATOM 14 N1 U A1026 124.143 -88.318 22.336 1.00 53.21 N
ATOM 15 C2 U A1026 123.166 -89.083 21.751 1.00 51.56 C
ATOM 16 O2 U A1026 122.325 -88.619 21.020 1.00 52.58 O
ATOM 17 N3 U A1026 123.202 -90.413 22.053 1.00 55.06 N
ATOM 18 C4 U A1026 124.102 -91.049 22.866 1.00 52.70 C
ATOM 19 O4 U A1026 124.099 -92.279 22.920 1.00 55.27 O
ATOM 20 C5 U A1026 125.072 -90.191 23.460 1.00 53.37 C
ATOM 21 C6 U A1026 125.063 -88.889 23.179 1.00 55.77 C
ATOM 22 P A A1027 124.450 -84.233 26.035 1.00 55.27 P
ATOM 23 OP1 A A1027 124.715 -82.887 26.598 1.00 64.11 O
ATOM 24 OP2 A A1027 125.146 -85.431 26.606 1.00 57.83 O
ATOM 25 O5' A A1027 122.881 -84.509 26.091 1.00 55.99 O
TER
ATOM 1 O3' U B1096 122.584 -97.977 21.204 1.00 63.23 O
ATOM 2 P A B1097 121.903 -99.188 20.412 1.00 69.27 P
ATOM 3 OP1 A B1097 121.676-100.319 21.347 1.00 51.32 O
ATOM 4 OP2 A B1097 122.731 -99.396 19.195 1.00 70.18 O
ATOM 5 O5' A B1097 120.503 -98.571 19.976 1.00 60.28 O
ATOM 6 C5' A B1097 119.338 -98.694 20.783 1.00 52.67 C
ATOM 7 C4' A B1097 118.197 -97.984 20.101 1.00 47.32 C
ATOM 8 O4' A B1097 118.046 -96.629 20.620 1.00 55.28 O
ATOM 9 C3' A B1097 118.405 -97.869 18.597 1.00 44.02 C
ATOM 10 O3' A B1097 117.301 -98.345 17.833 1.00 46.36 O
ATOM 11 C2' A B1097 118.806 -96.400 18.408 1.00 51.67 C
ATOM 12 O2' A B1097 118.491 -95.792 17.179 1.00 54.63 O
ATOM 13 C1' A B1097 118.098 -95.692 19.561 1.00 56.47 C
ATOM 14 N9 A B1097 118.879 -94.538 20.007 1.00 56.41 N
ATOM 15 C8 A B1097 120.100 -94.547 20.647 1.00 58.57 C
ATOM 16 N7 A B1097 120.574 -93.357 20.904 1.00 55.91 N
ATOM 17 C5 A B1097 119.605 -92.507 20.413 1.00 54.55 C
ATOM 18 C6 A B1097 119.520 -91.123 20.369 1.00 55.36 C
ATOM 19 N6 A B1097 120.461 -90.317 20.864 1.00 51.75 N
ATOM 20 N1 A B1097 118.426 -90.577 19.793 1.00 60.06 N
ATOM 21 C2 A B1097 117.482 -91.400 19.300 1.00 56.45 C
ATOM 22 N3 A B1097 117.448 -92.725 19.287 1.00 52.55 N
ATOM 23 C4 A B1097 118.552 -93.222 19.863 1.00 53.98 C
ATOM 24 P A B1098 117.526 -99.545 16.770 1.00 58.57 P
ATOM 25 OP1 A B1098 116.985-100.809 17.322 1.00 49.90 O
ATOM 26 OP2 A B1098 118.944 -99.494 16.321 1.00 62.22 O
ATOM 27 O5' A B1098 116.603 -99.140 15.542 1.00 45.74 O
TER
ATOM 2 P U A1026 129.053 -87.013 23.850 1.00 64.23 P
ATOM 3 OP1 U A1026 129.937 -85.976 24.438 1.00 54.93 O
ATOM 4 OP2 U A1026 128.990 -88.380 24.447 1.00 54.42 O
ATOM 5 O5' U A1026 127.577 -86.438 23.809 1.00 58.99 O
ATOM 6 C5' U A1026 127.281 -85.376 22.931 1.00 59.97 C
ATOM 7 C4' U A1026 125.829 -85.369 22.599 1.00 53.66 C
ATOM 8 O4' U A1026 125.490 -86.488 21.743 1.00 55.84 O
ATOM 9 C3' U A1026 124.905 -85.493 23.785 1.00 54.54 C
ATOM 10 O3' U A1026 124.757 -84.247 24.458 1.00 55.65 O
ATOM 11 C2' U A1026 123.621 -85.976 23.125 1.00 55.08 C
ATOM 12 O2' U A1026 122.974 -84.884 22.518 1.00 57.59 O
ATOM 13 C1' U A1026 124.161 -86.883 22.016 1.00 55.70 C
ATOM 14 N1 U A1026 124.143 -88.318 22.336 1.00 53.21 N
ATOM 15 C2 U A1026 123.166 -89.083 21.751 1.00 51.56 C
ATOM 16 O2 U A1026 122.325 -88.619 21.020 1.00 52.58 O
ATOM 17 N3 U A1026 123.202 -90.413 22.053 1.00 55.06 N
ATOM 18 C4 U A1026 124.102 -91.049 22.866 1.00 52.70 C
ATOM 19 O4 U A1026 124.099 -92.279 22.920 1.00 55.27 O
ATOM 20 C5 U A1026 125.072 -90.191 23.460 1.00 53.37 C
ATOM 21 C6 U A1026 125.063 -88.889 23.179 1.00 55.77 C
ATOM 22 P A A1027 124.450 -84.233 26.035 1.00 55.27 P
ATOM 23 OP1 A A1027 124.715 -82.887 26.598 1.00 64.11 O
ATOM 24 OP2 A A1027 125.146 -85.431 26.606 1.00 57.83 O
ATOM 25 O5' A A1027 122.881 -84.509 26.091 1.00 55.99 O
TER
ATOM 1 O3' U B1096 122.584 -97.977 21.204 1.00 63.23 O
ATOM 2 P A B1097 121.903 -99.188 20.412 1.00 69.27 P
ATOM 3 OP1 A B1097 121.676-100.319 21.347 1.00 51.32 O
ATOM 4 OP2 A B1097 122.731 -99.396 19.195 1.00 70.18 O
ATOM 5 O5' A B1097 120.503 -98.571 19.976 1.00 60.28 O
ATOM 6 C5' A B1097 119.338 -98.694 20.783 1.00 52.67 C
ATOM 7 C4' A B1097 118.197 -97.984 20.101 1.00 47.32 C
ATOM 8 O4' A B1097 118.046 -96.629 20.620 1.00 55.28 O
ATOM 9 C3' A B1097 118.405 -97.869 18.597 1.00 44.02 C
ATOM 10 O3' A B1097 117.301 -98.345 17.833 1.00 46.36 O
ATOM 11 C2' A B1097 118.806 -96.400 18.408 1.00 51.67 C
ATOM 12 O2' A B1097 118.491 -95.792 17.179 1.00 54.63 O
ATOM 13 C1' A B1097 118.098 -95.692 19.561 1.00 56.47 C
ATOM 14 N9 A B1097 118.879 -94.538 20.007 1.00 56.41 N
ATOM 15 C8 A B1097 120.100 -94.547 20.647 1.00 58.57 C
ATOM 16 N7 A B1097 120.574 -93.357 20.904 1.00 55.91 N
ATOM 17 C5 A B1097 119.605 -92.507 20.413 1.00 54.55 C
ATOM 18 C6 A B1097 119.520 -91.123 20.369 1.00 55.36 C
ATOM 19 N6 A B1097 120.461 -90.317 20.864 1.00 51.75 N
ATOM 20 N1 A B1097 118.426 -90.577 19.793 1.00 60.06 N
ATOM 21 C2 A B1097 117.482 -91.400 19.300 1.00 56.45 C
ATOM 22 N3 A B1097 117.448 -92.725 19.287 1.00 52.55 N
ATOM 23 C4 A B1097 118.552 -93.222 19.863 1.00 53.98 C
ATOM 24 P A B1098 117.526 -99.545 16.770 1.00 58.57 P
ATOM 25 OP1 A B1098 116.985-100.809 17.322 1.00 49.90 O
ATOM 26 OP2 A B1098 118.944 -99.494 16.321 1.00 62.22 O
ATOM 27 O5' A B1098 116.603 -99.140 15.542 1.00 45.74 O
TER
Atoms:
C4: (124.102,-91.049,22.866)
N3: (123.202,-90.413,22.053)
OP1: (129.937,-85.976,24.438)
OP2: (128.990,-88.380,24.447)
C2: (123.166,-89.083,21.751)
C1': (124.161,-86.883,22.016)
C3': (124.905,-85.493,23.785)
O5': (127.577,-86.438,23.809)
O4': (125.490,-86.488,21.743)
C5': (127.281,-85.376,22.931)
P: (129.053,-87.013,23.850)
C4': (125.829,-85.369,22.599)
C2': (123.621,-85.976,23.125)
O2': (122.974,-84.884,22.518)
N1: (124.143,-88.318,22.336)
O4: (124.099,-92.279,22.920)
O2: (122.325,-88.619,21.020)
C6: (125.063,-88.889,23.179)
C5: (125.072,-90.191,23.460)
O3': (124.757,-84.247,24.458)
N3: (123.202,-90.413,22.053)
OP1: (129.937,-85.976,24.438)
OP2: (128.990,-88.380,24.447)
C2: (123.166,-89.083,21.751)
C1': (124.161,-86.883,22.016)
C3': (124.905,-85.493,23.785)
O5': (127.577,-86.438,23.809)
O4': (125.490,-86.488,21.743)
C5': (127.281,-85.376,22.931)
P: (129.053,-87.013,23.850)
C4': (125.829,-85.369,22.599)
C2': (123.621,-85.976,23.125)
O2': (122.974,-84.884,22.518)
N1: (124.143,-88.318,22.336)
O4: (124.099,-92.279,22.920)
O2: (122.325,-88.619,21.020)
C6: (125.063,-88.889,23.179)
C5: (125.072,-90.191,23.460)
O3': (124.757,-84.247,24.458)
OP1: (121.676,-100.319,21.347)
OP2: (122.731,-99.396,19.195)
C3': (118.405,-97.869,18.597)
C1': (118.098,-95.692,19.561)
C5': (119.338,-98.694,20.783)
O4': (118.046,-96.629,20.620)
C8: (120.100,-94.547,20.647)
O2': (118.491,-95.792,17.179)
C6: (119.520,-91.123,20.369)
C5: (119.605,-92.507,20.413)
C4: (118.552,-93.222,19.863)
P: (121.903,-99.188,20.412)
C4': (118.197,-97.984,20.101)
C2': (118.806,-96.400,18.408)
C2: (117.482,-91.400,19.300)
N1: (118.426,-90.577,19.793)
N3: (117.448,-92.725,19.287)
N6: (120.461,-90.317,20.864)
N7: (120.574,-93.357,20.904)
N9: (118.879,-94.538,20.007)
O5': (120.503,-98.571,19.976)
O3': (117.301,-98.345,17.833)
OP2: (122.731,-99.396,19.195)
C3': (118.405,-97.869,18.597)
C1': (118.098,-95.692,19.561)
C5': (119.338,-98.694,20.783)
O4': (118.046,-96.629,20.620)
C8: (120.100,-94.547,20.647)
O2': (118.491,-95.792,17.179)
C6: (119.520,-91.123,20.369)
C5: (119.605,-92.507,20.413)
C4: (118.552,-93.222,19.863)
P: (121.903,-99.188,20.412)
C4': (118.197,-97.984,20.101)
C2': (118.806,-96.400,18.408)
C2: (117.482,-91.400,19.300)
N1: (118.426,-90.577,19.793)
N3: (117.448,-92.725,19.287)
N6: (120.461,-90.317,20.864)
N7: (120.574,-93.357,20.904)
N9: (118.879,-94.538,20.007)
O5': (120.503,-98.571,19.976)
O3': (117.301,-98.345,17.833)
Image (generated by PyMOL):