Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0347:0281
Extra
PDB:
ATOM 1 O3' G A 346 59.127 123.464 8.595 1.00 80.55 O
ATOM 2 P U A 347 60.020 122.365 7.820 1.00 80.97 P
ATOM 3 OP1 U A 347 61.353 122.216 8.472 1.00 80.71 O
ATOM 4 OP2 U A 347 59.943 122.689 6.370 1.00 81.94 O
ATOM 5 O5' U A 347 59.196 121.012 8.013 1.00 80.48 O
ATOM 6 C5' U A 347 59.319 120.215 9.214 1.00 78.94 C
ATOM 7 C4' U A 347 57.989 119.580 9.561 1.00 78.38 C
ATOM 8 O4' U A 347 57.044 120.618 9.926 1.00 77.51 O
ATOM 9 C3' U A 347 57.298 118.816 8.440 1.00 79.00 C
ATOM 10 O3' U A 347 57.801 117.480 8.352 1.00 82.49 O
ATOM 11 C2' U A 347 55.832 118.859 8.862 1.00 77.15 C
ATOM 12 O2' U A 347 55.501 117.885 9.832 1.00 75.73 O
ATOM 13 C1' U A 347 55.740 120.240 9.519 1.00 75.96 C
ATOM 14 N1 U A 347 55.160 121.320 8.700 1.00 74.53 N
ATOM 15 C2 U A 347 53.810 121.234 8.382 1.00 73.63 C
ATOM 16 O2 U A 347 53.107 120.289 8.706 1.00 73.34 O
ATOM 17 N3 U A 347 53.314 122.298 7.667 1.00 73.34 N
ATOM 18 C4 U A 347 54.008 123.413 7.239 1.00 73.07 C
ATOM 19 O4 U A 347 53.401 124.312 6.654 1.00 72.25 O
ATOM 20 C5 U A 347 55.400 123.419 7.581 1.00 72.55 C
ATOM 21 C6 U A 347 55.918 122.399 8.277 1.00 73.20 C
ATOM 22 P A A 348 57.788 116.701 6.940 1.00 84.08 P
ATOM 23 OP1 A A 348 58.376 115.352 7.182 1.00 82.89 O
ATOM 24 OP2 A A 348 58.387 117.583 5.906 1.00 83.55 O
ATOM 25 O5' A A 348 56.237 116.530 6.606 1.00 83.47 O
TER
ATOM 1 O3' G B 280 51.150 127.638 2.320 1.00 82.51 O
ATOM 2 P A B 281 50.958 128.467 3.687 1.00 84.79 P
ATOM 3 OP1 A B 281 49.658 129.190 3.587 1.00 84.21 O
ATOM 4 OP2 A B 281 52.205 129.234 3.959 1.00 83.37 O
ATOM 5 O5' A B 281 50.828 127.329 4.797 1.00 83.83 O
ATOM 6 C5' A B 281 49.589 127.102 5.501 1.00 81.18 C
ATOM 7 C4' A B 281 48.670 126.232 4.674 1.00 80.59 C
ATOM 8 O4' A B 281 49.413 125.113 4.123 1.00 79.83 O
ATOM 9 C3' A B 281 47.534 125.582 5.444 1.00 80.88 C
ATOM 10 O3' A B 281 46.436 126.463 5.650 1.00 81.94 O
ATOM 11 C2' A B 281 47.202 124.377 4.575 1.00 80.17 C
ATOM 12 O2' A B 281 46.431 124.698 3.434 1.00 79.58 O
ATOM 13 C1' A B 281 48.603 123.946 4.138 1.00 79.63 C
ATOM 14 N9 A B 281 49.211 122.990 5.064 1.00 79.32 N
ATOM 15 C8 A B 281 50.398 123.117 5.751 1.00 79.27 C
ATOM 16 N7 A B 281 50.683 122.087 6.510 1.00 78.97 N
ATOM 17 C5 A B 281 49.615 121.221 6.312 1.00 78.43 C
ATOM 18 C6 A B 281 49.324 119.945 6.827 1.00 77.69 C
ATOM 19 N6 A B 281 50.116 119.290 7.680 1.00 76.07 N
ATOM 20 N1 A B 281 48.175 119.355 6.426 1.00 77.65 N
ATOM 21 C2 A B 281 47.383 120.009 5.564 1.00 77.26 C
ATOM 22 N3 A B 281 47.549 121.207 5.009 1.00 77.63 N
ATOM 23 C4 A B 281 48.699 121.766 5.427 1.00 78.62 C
ATOM 24 P C B 282 45.565 126.342 6.997 1.00 82.96 P
ATOM 25 OP1 C B 282 44.805 127.609 7.161 1.00 82.43 O
ATOM 26 OP2 C B 282 46.463 125.875 8.091 1.00 82.81 O
ATOM 27 O5' C B 282 44.528 125.176 6.675 1.00 83.63 O
TER
ATOM 2 P U A 347 60.020 122.365 7.820 1.00 80.97 P
ATOM 3 OP1 U A 347 61.353 122.216 8.472 1.00 80.71 O
ATOM 4 OP2 U A 347 59.943 122.689 6.370 1.00 81.94 O
ATOM 5 O5' U A 347 59.196 121.012 8.013 1.00 80.48 O
ATOM 6 C5' U A 347 59.319 120.215 9.214 1.00 78.94 C
ATOM 7 C4' U A 347 57.989 119.580 9.561 1.00 78.38 C
ATOM 8 O4' U A 347 57.044 120.618 9.926 1.00 77.51 O
ATOM 9 C3' U A 347 57.298 118.816 8.440 1.00 79.00 C
ATOM 10 O3' U A 347 57.801 117.480 8.352 1.00 82.49 O
ATOM 11 C2' U A 347 55.832 118.859 8.862 1.00 77.15 C
ATOM 12 O2' U A 347 55.501 117.885 9.832 1.00 75.73 O
ATOM 13 C1' U A 347 55.740 120.240 9.519 1.00 75.96 C
ATOM 14 N1 U A 347 55.160 121.320 8.700 1.00 74.53 N
ATOM 15 C2 U A 347 53.810 121.234 8.382 1.00 73.63 C
ATOM 16 O2 U A 347 53.107 120.289 8.706 1.00 73.34 O
ATOM 17 N3 U A 347 53.314 122.298 7.667 1.00 73.34 N
ATOM 18 C4 U A 347 54.008 123.413 7.239 1.00 73.07 C
ATOM 19 O4 U A 347 53.401 124.312 6.654 1.00 72.25 O
ATOM 20 C5 U A 347 55.400 123.419 7.581 1.00 72.55 C
ATOM 21 C6 U A 347 55.918 122.399 8.277 1.00 73.20 C
ATOM 22 P A A 348 57.788 116.701 6.940 1.00 84.08 P
ATOM 23 OP1 A A 348 58.376 115.352 7.182 1.00 82.89 O
ATOM 24 OP2 A A 348 58.387 117.583 5.906 1.00 83.55 O
ATOM 25 O5' A A 348 56.237 116.530 6.606 1.00 83.47 O
TER
ATOM 1 O3' G B 280 51.150 127.638 2.320 1.00 82.51 O
ATOM 2 P A B 281 50.958 128.467 3.687 1.00 84.79 P
ATOM 3 OP1 A B 281 49.658 129.190 3.587 1.00 84.21 O
ATOM 4 OP2 A B 281 52.205 129.234 3.959 1.00 83.37 O
ATOM 5 O5' A B 281 50.828 127.329 4.797 1.00 83.83 O
ATOM 6 C5' A B 281 49.589 127.102 5.501 1.00 81.18 C
ATOM 7 C4' A B 281 48.670 126.232 4.674 1.00 80.59 C
ATOM 8 O4' A B 281 49.413 125.113 4.123 1.00 79.83 O
ATOM 9 C3' A B 281 47.534 125.582 5.444 1.00 80.88 C
ATOM 10 O3' A B 281 46.436 126.463 5.650 1.00 81.94 O
ATOM 11 C2' A B 281 47.202 124.377 4.575 1.00 80.17 C
ATOM 12 O2' A B 281 46.431 124.698 3.434 1.00 79.58 O
ATOM 13 C1' A B 281 48.603 123.946 4.138 1.00 79.63 C
ATOM 14 N9 A B 281 49.211 122.990 5.064 1.00 79.32 N
ATOM 15 C8 A B 281 50.398 123.117 5.751 1.00 79.27 C
ATOM 16 N7 A B 281 50.683 122.087 6.510 1.00 78.97 N
ATOM 17 C5 A B 281 49.615 121.221 6.312 1.00 78.43 C
ATOM 18 C6 A B 281 49.324 119.945 6.827 1.00 77.69 C
ATOM 19 N6 A B 281 50.116 119.290 7.680 1.00 76.07 N
ATOM 20 N1 A B 281 48.175 119.355 6.426 1.00 77.65 N
ATOM 21 C2 A B 281 47.383 120.009 5.564 1.00 77.26 C
ATOM 22 N3 A B 281 47.549 121.207 5.009 1.00 77.63 N
ATOM 23 C4 A B 281 48.699 121.766 5.427 1.00 78.62 C
ATOM 24 P C B 282 45.565 126.342 6.997 1.00 82.96 P
ATOM 25 OP1 C B 282 44.805 127.609 7.161 1.00 82.43 O
ATOM 26 OP2 C B 282 46.463 125.875 8.091 1.00 82.81 O
ATOM 27 O5' C B 282 44.528 125.176 6.675 1.00 83.63 O
TER
Atoms:
C4: (54.008,123.413,7.239)
N3: (53.314,122.298,7.667)
OP1: (61.353,122.216,8.472)
OP2: (59.943,122.689,6.370)
C2: (53.810,121.234,8.382)
C1': (55.740,120.240,9.519)
C3': (57.298,118.816,8.440)
O5': (59.196,121.012,8.013)
O4': (57.044,120.618,9.926)
C5': (59.319,120.215,9.214)
P: (60.020,122.365,7.820)
C4': (57.989,119.580,9.561)
C2': (55.832,118.859,8.862)
O2': (55.501,117.885,9.832)
N1: (55.160,121.320,8.700)
O4: (53.401,124.312,6.654)
O2: (53.107,120.289,8.706)
C6: (55.918,122.399,8.277)
C5: (55.400,123.419,7.581)
O3': (57.801,117.480,8.352)
N3: (53.314,122.298,7.667)
OP1: (61.353,122.216,8.472)
OP2: (59.943,122.689,6.370)
C2: (53.810,121.234,8.382)
C1': (55.740,120.240,9.519)
C3': (57.298,118.816,8.440)
O5': (59.196,121.012,8.013)
O4': (57.044,120.618,9.926)
C5': (59.319,120.215,9.214)
P: (60.020,122.365,7.820)
C4': (57.989,119.580,9.561)
C2': (55.832,118.859,8.862)
O2': (55.501,117.885,9.832)
N1: (55.160,121.320,8.700)
O4: (53.401,124.312,6.654)
O2: (53.107,120.289,8.706)
C6: (55.918,122.399,8.277)
C5: (55.400,123.419,7.581)
O3': (57.801,117.480,8.352)
OP1: (49.658,129.190,3.587)
OP2: (52.205,129.234,3.959)
C3': (47.534,125.582,5.444)
C1': (48.603,123.946,4.138)
C5': (49.589,127.102,5.501)
O4': (49.413,125.113,4.123)
C8: (50.398,123.117,5.751)
O2': (46.431,124.698,3.434)
C6: (49.324,119.945,6.827)
C5: (49.615,121.221,6.312)
C4: (48.699,121.766,5.427)
P: (50.958,128.467,3.687)
C4': (48.670,126.232,4.674)
C2': (47.202,124.377,4.575)
C2: (47.383,120.009,5.564)
N1: (48.175,119.355,6.426)
N3: (47.549,121.207,5.009)
N6: (50.116,119.290,7.680)
N7: (50.683,122.087,6.510)
N9: (49.211,122.990,5.064)
O5': (50.828,127.329,4.797)
O3': (46.436,126.463,5.650)
OP2: (52.205,129.234,3.959)
C3': (47.534,125.582,5.444)
C1': (48.603,123.946,4.138)
C5': (49.589,127.102,5.501)
O4': (49.413,125.113,4.123)
C8: (50.398,123.117,5.751)
O2': (46.431,124.698,3.434)
C6: (49.324,119.945,6.827)
C5: (49.615,121.221,6.312)
C4: (48.699,121.766,5.427)
P: (50.958,128.467,3.687)
C4': (48.670,126.232,4.674)
C2': (47.202,124.377,4.575)
C2: (47.383,120.009,5.564)
N1: (48.175,119.355,6.426)
N3: (47.549,121.207,5.009)
N6: (50.116,119.290,7.680)
N7: (50.683,122.087,6.510)
N9: (49.211,122.990,5.064)
O5': (50.828,127.329,4.797)
O3': (46.436,126.463,5.650)
Image (generated by PyMOL):