ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A642:A719

Extra

PDB:
ATOM 1 O3' A A 641 164.432 123.211 -63.267 1.00 71.42 O
ATOM 2 P G A 642 165.316 122.205 -64.151 1.00 62.77 P
ATOM 3 OP1 G A 642 166.643 122.855 -64.283 1.00 54.41 O
ATOM 4 OP2 G A 642 164.581 121.780 -65.372 1.00 54.41 O
ATOM 5 O5' G A 642 165.475 120.929 -63.219 1.00 62.77 O
ATOM 6 C5' G A 642 165.898 121.077 -61.865 1.00 62.77 C
ATOM 7 C4' G A 642 165.651 119.807 -61.096 1.00 62.77 C
ATOM 8 O4' G A 642 164.231 119.593 -60.885 1.00 62.77 O
ATOM 9 C3' G A 642 166.143 118.514 -61.724 1.00 62.77 C
ATOM 10 O3' G A 642 167.534 118.326 -61.463 1.00 62.77 O
ATOM 11 C2' G A 642 165.314 117.473 -60.978 1.00 62.77 C
ATOM 12 O2' G A 642 165.886 117.175 -59.720 1.00 62.77 O
ATOM 13 C1' G A 642 163.982 118.205 -60.762 1.00 62.77 C
ATOM 14 N9 G A 642 162.987 117.806 -61.751 1.00 54.41 N
ATOM 15 C8 G A 642 162.729 118.409 -62.955 1.00 54.41 C
ATOM 16 N7 G A 642 161.874 117.751 -63.685 1.00 54.41 N
ATOM 17 C5 G A 642 161.523 116.663 -62.904 1.00 54.41 C
ATOM 18 C6 G A 642 160.652 115.594 -63.177 1.00 54.41 C
ATOM 19 O6 G A 642 160.014 115.370 -64.203 1.00 54.41 O
ATOM 20 N1 G A 642 160.565 114.718 -62.105 1.00 54.41 N
ATOM 21 C2 G A 642 161.238 114.848 -60.924 1.00 54.41 C
ATOM 22 N2 G A 642 161.006 113.892 -60.012 1.00 54.41 N
ATOM 23 N3 G A 642 162.075 115.839 -60.659 1.00 54.41 N
ATOM 24 C4 G A 642 162.170 116.704 -61.691 1.00 54.41 C
ATOM 25 P A A 643 168.563 118.036 -62.675 1.00 56.90 P
ATOM 26 OP1 A A 643 169.288 119.314 -62.912 1.00 38.10 O
ATOM 27 OP2 A A 643 167.887 117.344 -63.825 1.00 38.10 O
ATOM 28 O5' A A 643 169.604 117.019 -62.021 1.00 56.90 O
TER

ATOM 1 O3' U B 718 154.566 105.712 -66.846 1.00 69.78 O
ATOM 2 P G B 719 153.873 106.975 -66.123 1.00 50.89 P
ATOM 3 OP1 G B 719 152.439 106.659 -65.934 1.00 52.21 O
ATOM 4 OP2 G B 719 154.265 108.219 -66.840 1.00 52.21 O
ATOM 5 O5' G B 719 154.554 107.027 -64.681 1.00 50.89 O
ATOM 6 C5' G B 719 154.555 105.867 -63.828 1.00 50.89 C
ATOM 7 C4' G B 719 155.149 106.192 -62.479 1.00 50.89 C
ATOM 8 O4' G B 719 156.576 106.437 -62.582 1.00 50.89 O
ATOM 9 C3' G B 719 154.629 107.436 -61.787 1.00 50.89 C
ATOM 10 O3' G B 719 153.373 107.268 -61.173 1.00 50.89 O
ATOM 11 C2' G B 719 155.724 107.728 -60.775 1.00 50.89 C
ATOM 12 O2' G B 719 155.620 106.923 -59.621 1.00 50.89 O
ATOM 13 C1' G B 719 156.974 107.360 -61.571 1.00 50.89 C
ATOM 14 N9 G B 719 157.488 108.565 -62.211 1.00 52.21 N
ATOM 15 C8 G B 719 157.337 108.927 -63.525 1.00 52.21 C
ATOM 16 N7 G B 719 157.833 110.102 -63.791 1.00 52.21 N
ATOM 17 C5 G B 719 158.361 110.536 -62.585 1.00 52.21 C
ATOM 18 C6 G B 719 159.008 111.748 -62.260 1.00 52.21 C
ATOM 19 O6 G B 719 159.240 112.715 -62.994 1.00 52.21 O
ATOM 20 N1 G B 719 159.392 111.782 -60.928 1.00 52.21 N
ATOM 21 C2 G B 719 159.171 110.779 -60.023 1.00 52.21 C
ATOM 22 N2 G B 719 159.624 111.004 -58.784 1.00 52.21 N
ATOM 23 N3 G B 719 158.555 109.640 -60.312 1.00 52.21 N
ATOM 24 C4 G B 719 158.178 109.591 -61.604 1.00 52.21 C
ATOM 25 P G B 720 152.382 108.526 -61.083 1.00 49.22 P
ATOM 26 OP1 G B 720 151.091 107.958 -60.640 1.00 42.62 O
ATOM 27 OP2 G B 720 152.454 109.272 -62.366 1.00 42.62 O
ATOM 28 O5' G B 720 153.013 109.441 -59.932 1.00 49.22 O
TER

Atoms:
OP1: (166.643,122.855,-64.283)
OP2: (164.581,121.780,-65.372)
C3': (166.143,118.514,-61.724)
C1': (163.982,118.205,-60.762)
C5': (165.898,121.077,-61.865)
O6: (160.014,115.370,-64.203)
O4': (164.231,119.593,-60.885)
C8: (162.729,118.409,-62.955)
C2: (161.238,114.848,-60.924)
C6: (160.652,115.594,-63.177)
C5: (161.523,116.663,-62.904)
C4: (162.170,116.704,-61.691)
P: (165.316,122.205,-64.151)
C4': (165.651,119.807,-61.096)
C2': (165.314,117.473,-60.978)
O2': (165.886,117.175,-59.720)
N1: (160.565,114.718,-62.105)
N2: (161.006,113.892,-60.012)
N3: (162.075,115.839,-60.659)
N7: (161.874,117.751,-63.685)
N9: (162.987,117.806,-61.751)
O5': (165.475,120.929,-63.219)
O3': (167.534,118.326,-61.463)
OP1: (152.439,106.659,-65.934)
OP2: (154.265,108.219,-66.840)
C3': (154.629,107.436,-61.787)
C1': (156.974,107.360,-61.571)
C5': (154.555,105.867,-63.828)
O6: (159.240,112.715,-62.994)
O4': (156.576,106.437,-62.582)
C8: (157.337,108.927,-63.525)
C2: (159.171,110.779,-60.023)
C6: (159.008,111.748,-62.260)
C5: (158.361,110.536,-62.585)
C4: (158.178,109.591,-61.604)
P: (153.873,106.975,-66.123)
C4': (155.149,106.192,-62.479)
C2': (155.724,107.728,-60.775)
O2': (155.620,106.923,-59.621)
N1: (159.392,111.782,-60.928)
N2: (159.624,111.004,-58.784)
N3: (158.555,109.640,-60.312)
N7: (157.833,110.102,-63.791)
N9: (157.488,108.565,-62.211)
O5': (154.554,107.027,-64.681)
O3': (153.373,107.268,-61.173)
Image (generated by PyMOL):
PyMOL image
show in jmol