ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A642:A719

Extra

PDB:
ATOM 1 O3' A A 641 164.959 123.292 -63.038 1.00 42.78 O
ATOM 2 P G A 642 165.846 122.261 -63.893 1.00 41.94 P
ATOM 3 OP1 G A 642 167.158 122.955 -64.061 1.00 43.15 O
ATOM 4 OP2 G A 642 165.108 121.776 -65.088 1.00 40.12 O
ATOM 5 O5' G A 642 166.013 121.061 -62.901 1.00 39.81 O
ATOM 6 C5' G A 642 166.429 121.296 -61.552 1.00 39.66 C
ATOM 7 C4' G A 642 166.327 120.025 -60.745 1.00 39.40 C
ATOM 8 O4' G A 642 164.952 119.731 -60.397 1.00 39.13 O
ATOM 9 C3' G A 642 166.833 118.773 -61.433 1.00 38.66 C
ATOM 10 O3' G A 642 168.232 118.703 -61.276 1.00 40.22 O
ATOM 11 C2' G A 642 166.115 117.674 -60.666 1.00 37.81 C
ATOM 12 O2' G A 642 166.782 117.393 -59.458 1.00 38.94 O
ATOM 13 C1' G A 642 164.765 118.330 -60.353 1.00 37.05 C
ATOM 14 N9 G A 642 163.755 117.976 -61.344 1.00 34.95 N
ATOM 15 C8 G A 642 163.492 118.636 -62.518 1.00 34.52 C
ATOM 16 N7 G A 642 162.625 118.017 -63.269 1.00 34.76 N
ATOM 17 C5 G A 642 162.273 116.896 -62.536 1.00 33.01 C
ATOM 18 C6 G A 642 161.403 115.844 -62.855 1.00 33.07 C
ATOM 19 O6 G A 642 160.768 115.665 -63.895 1.00 33.83 O
ATOM 20 N1 G A 642 161.316 114.921 -61.823 1.00 33.81 N
ATOM 21 C2 G A 642 161.996 114.992 -60.641 1.00 33.02 C
ATOM 22 N2 G A 642 161.779 113.990 -59.786 1.00 33.48 N
ATOM 23 N3 G A 642 162.830 115.967 -60.330 1.00 33.08 N
ATOM 24 C4 G A 642 162.925 116.878 -61.324 1.00 33.73 C
ATOM 25 P A A 643 169.157 118.119 -62.458 1.00 39.27 P
ATOM 26 OP1 A A 643 170.111 119.210 -62.807 1.00 38.54 O
ATOM 27 OP2 A A 643 168.306 117.513 -63.523 1.00 38.68 O
ATOM 28 O5' A A 643 169.984 116.982 -61.688 1.00 38.48 O
TER

ATOM 1 O3' U B 718 155.150 105.823 -66.496 1.00 39.34 O
ATOM 2 P G B 719 154.422 107.104 -65.830 1.00 38.14 P
ATOM 3 OP1 G B 719 152.988 106.737 -65.666 1.00 38.39 O
ATOM 4 OP2 G B 719 154.788 108.329 -66.588 1.00 36.35 O
ATOM 5 O5' G B 719 155.066 107.195 -64.376 1.00 37.85 O
ATOM 6 C5' G B 719 155.054 106.050 -63.515 1.00 38.20 C
ATOM 7 C4' G B 719 155.694 106.364 -62.186 1.00 39.21 C
ATOM 8 O4' G B 719 157.130 106.560 -62.322 1.00 39.59 O
ATOM 9 C3' G B 719 155.238 107.616 -61.465 1.00 39.71 C
ATOM 10 O3' G B 719 153.988 107.495 -60.841 1.00 40.23 O
ATOM 11 C2' G B 719 156.364 107.824 -60.464 1.00 39.36 C
ATOM 12 O2' G B 719 156.246 106.959 -59.351 1.00 39.61 O
ATOM 13 C1' G B 719 157.586 107.431 -61.294 1.00 39.36 C
ATOM 14 N9 G B 719 158.161 108.628 -61.900 1.00 38.86 N
ATOM 15 C8 G B 719 158.094 109.014 -63.218 1.00 39.21 C
ATOM 16 N7 G B 719 158.633 110.184 -63.436 1.00 39.05 N
ATOM 17 C5 G B 719 159.102 110.584 -62.192 1.00 38.37 C
ATOM 18 C6 G B 719 159.771 111.769 -61.807 1.00 39.29 C
ATOM 19 O6 G B 719 160.080 112.738 -62.507 1.00 41.09 O
ATOM 20 N1 G B 719 160.075 111.767 -60.450 1.00 39.46 N
ATOM 21 C2 G B 719 159.764 110.757 -59.574 1.00 38.92 C
ATOM 22 N2 G B 719 160.129 110.949 -58.293 1.00 37.26 N
ATOM 23 N3 G B 719 159.139 109.644 -59.924 1.00 38.97 N
ATOM 24 C4 G B 719 158.838 109.627 -61.238 1.00 38.19 C
ATOM 25 P G B 720 153.057 108.801 -60.700 1.00 41.56 P
ATOM 26 OP1 G B 720 151.712 108.301 -60.277 1.00 41.41 O
ATOM 27 OP2 G B 720 153.192 109.583 -61.954 1.00 41.66 O
ATOM 28 O5' G B 720 153.726 109.653 -59.504 1.00 39.17 O
TER

Atoms:
OP1: (167.158,122.955,-64.061)
OP2: (165.108,121.776,-65.088)
C3': (166.833,118.773,-61.433)
C1': (164.765,118.330,-60.353)
C5': (166.429,121.296,-61.552)
O6: (160.768,115.665,-63.895)
O4': (164.952,119.731,-60.397)
C8: (163.492,118.636,-62.518)
C2: (161.996,114.992,-60.641)
C6: (161.403,115.844,-62.855)
C5: (162.273,116.896,-62.536)
C4: (162.925,116.878,-61.324)
P: (165.846,122.261,-63.893)
C4': (166.327,120.025,-60.745)
C2': (166.115,117.674,-60.666)
O2': (166.782,117.393,-59.458)
N1: (161.316,114.921,-61.823)
N2: (161.779,113.990,-59.786)
N3: (162.830,115.967,-60.330)
N7: (162.625,118.017,-63.269)
N9: (163.755,117.976,-61.344)
O5': (166.013,121.061,-62.901)
O3': (168.232,118.703,-61.276)
OP1: (152.988,106.737,-65.666)
OP2: (154.788,108.329,-66.588)
C3': (155.238,107.616,-61.465)
C1': (157.586,107.431,-61.294)
C5': (155.054,106.050,-63.515)
O6: (160.080,112.738,-62.507)
O4': (157.130,106.560,-62.322)
C8: (158.094,109.014,-63.218)
C2: (159.764,110.757,-59.574)
C6: (159.771,111.769,-61.807)
C5: (159.102,110.584,-62.192)
C4: (158.838,109.627,-61.238)
P: (154.422,107.104,-65.830)
C4': (155.694,106.364,-62.186)
C2': (156.364,107.824,-60.464)
O2': (156.246,106.959,-59.351)
N1: (160.075,111.767,-60.450)
N2: (160.129,110.949,-58.293)
N3: (159.139,109.644,-59.924)
N7: (158.633,110.184,-63.436)
N9: (158.161,108.628,-61.900)
O5': (155.066,107.195,-64.376)
O3': (153.988,107.495,-60.841)
Image (generated by PyMOL):
PyMOL image
show in jmol