ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A642:A719

Extra

PDB:
ATOM 1 O3' A A 641 -4.549 126.999 61.850 1.00 85.03 O
ATOM 2 P G A 642 -4.585 127.997 63.089 1.00 91.20 P
ATOM 3 OP1 G A 642 -5.648 128.996 62.825 1.00 83.73 O
ATOM 4 OP2 G A 642 -3.190 128.402 63.384 1.00 70.85 O
ATOM 5 O5' G A 642 -5.072 127.060 64.278 1.00 94.55 O
ATOM 6 C5' G A 642 -6.192 126.219 64.110 1.00 87.20 C
ATOM 7 C4' G A 642 -6.134 125.167 65.192 1.00 76.25 C
ATOM 8 O4' G A 642 -4.913 124.404 65.074 1.00 69.65 O
ATOM 9 C3' G A 642 -6.018 125.715 66.603 1.00 71.83 C
ATOM 10 O3' G A 642 -7.271 126.248 67.032 1.00 85.17 O
ATOM 11 C2' G A 642 -5.653 124.423 67.316 1.00 70.45 C
ATOM 12 O2' G A 642 -6.779 123.589 67.496 1.00 81.47 O
ATOM 13 C1' G A 642 -4.670 123.792 66.326 1.00 68.41 C
ATOM 14 N9 G A 642 -3.291 124.011 66.751 1.00 70.47 N
ATOM 15 C8 G A 642 -2.493 125.088 66.465 1.00 80.59 C
ATOM 16 N7 G A 642 -1.305 125.017 67.003 1.00 86.66 N
ATOM 17 C5 G A 642 -1.314 123.817 67.699 1.00 80.80 C
ATOM 18 C6 G A 642 -0.305 123.202 68.483 1.00 79.69 C
ATOM 19 O6 G A 642 0.845 123.602 68.736 1.00 78.55 O
ATOM 20 N1 G A 642 -0.740 121.988 69.007 1.00 75.81 N
ATOM 21 C2 G A 642 -1.984 121.445 68.802 1.00 76.01 C
ATOM 22 N2 G A 642 -2.219 120.264 69.391 1.00 80.73 N
ATOM 23 N3 G A 642 -2.934 122.012 68.071 1.00 73.52 N
ATOM 24 C4 G A 642 -2.531 123.191 67.552 1.00 72.12 C
ATOM 25 P A A 643 -7.405 127.703 67.709 1.00 87.63 P
ATOM 26 OP1 A A 643 -8.295 128.518 66.850 1.00 64.03 O
ATOM 27 OP2 A A 643 -6.063 128.192 68.100 1.00 70.07 O
ATOM 28 O5' A A 643 -8.211 127.373 69.041 1.00 83.23 O
TER

ATOM 1 O3' U B 718 8.132 120.988 76.673 1.00 66.29 O
ATOM 2 P G B 719 7.945 120.044 75.401 1.00 69.50 P
ATOM 3 OP1 G B 719 8.903 118.921 75.525 1.00 61.48 O
ATOM 4 OP2 G B 719 7.939 120.876 74.187 1.00 57.52 O
ATOM 5 O5' G B 719 6.471 119.478 75.594 1.00 70.80 O
ATOM 6 C5' G B 719 6.282 118.350 76.427 1.00 68.13 C
ATOM 7 C4' G B 719 4.920 117.744 76.181 1.00 60.80 C
ATOM 8 O4' G B 719 3.918 118.781 76.322 1.00 59.87 O
ATOM 9 C3' G B 719 4.704 117.196 74.779 1.00 61.56 C
ATOM 10 O3' G B 719 5.280 115.901 74.658 1.00 76.39 O
ATOM 11 C2' G B 719 3.181 117.154 74.771 1.00 67.47 C
ATOM 12 O2' G B 719 2.639 116.065 75.494 1.00 54.14 O
ATOM 13 C1' G B 719 2.832 118.466 75.472 1.00 71.03 C
ATOM 14 N9 G B 719 2.653 119.527 74.495 1.00 71.07 N
ATOM 15 C8 G B 719 3.479 120.595 74.253 1.00 77.13 C
ATOM 16 N7 G B 719 3.047 121.365 73.294 1.00 84.28 N
ATOM 17 C5 G B 719 1.865 120.760 72.872 1.00 80.55 C
ATOM 18 C6 G B 719 0.953 121.144 71.855 1.00 85.16 C
ATOM 19 O6 G B 719 1.010 122.133 71.098 1.00 90.20 O
ATOM 20 N1 G B 719 -0.106 120.239 71.771 1.00 74.73 N
ATOM 21 C2 G B 719 -0.257 119.124 72.564 1.00 71.06 C
ATOM 22 N2 G B 719 -1.336 118.370 72.343 1.00 78.77 N
ATOM 23 N3 G B 719 0.582 118.760 73.512 1.00 65.39 N
ATOM 24 C4 G B 719 1.615 119.624 73.605 1.00 69.86 C
ATOM 25 P G B 720 5.965 115.402 73.299 1.00 90.60 P
ATOM 26 OP1 G B 720 6.639 114.116 73.588 1.00 79.69 O
ATOM 27 OP2 G B 720 6.734 116.517 72.700 1.00 70.60 O
ATOM 28 O5' G B 720 4.686 115.093 72.390 1.00 74.65 O
TER

Atoms:
OP1: (-5.648,128.996,62.825)
OP2: (-3.190,128.402,63.384)
C3': (-6.018,125.715,66.603)
C1': (-4.670,123.792,66.326)
C5': (-6.192,126.219,64.110)
O6: (0.845,123.602,68.736)
O4': (-4.913,124.404,65.074)
C8: (-2.493,125.088,66.465)
C2: (-1.984,121.445,68.802)
C6: (-0.305,123.202,68.483)
C5: (-1.314,123.817,67.699)
C4: (-2.531,123.191,67.552)
P: (-4.585,127.997,63.089)
C4': (-6.134,125.167,65.192)
C2': (-5.653,124.423,67.316)
O2': (-6.779,123.589,67.496)
N1: (-0.740,121.988,69.007)
N2: (-2.219,120.264,69.391)
N3: (-2.934,122.012,68.071)
N7: (-1.305,125.017,67.003)
N9: (-3.291,124.011,66.751)
O5': (-5.072,127.060,64.278)
O3': (-7.271,126.248,67.032)
OP1: (8.903,118.921,75.525)
OP2: (7.939,120.876,74.187)
C3': (4.704,117.196,74.779)
C1': (2.832,118.466,75.472)
C5': (6.282,118.350,76.427)
O6: (1.010,122.133,71.098)
O4': (3.918,118.781,76.322)
C8: (3.479,120.595,74.253)
C2: (-0.257,119.124,72.564)
C6: (0.953,121.144,71.855)
C5: (1.865,120.760,72.872)
C4: (1.615,119.624,73.605)
P: (7.945,120.044,75.401)
C4': (4.920,117.744,76.181)
C2': (3.181,117.154,74.771)
O2': (2.639,116.065,75.494)
N1: (-0.106,120.239,71.771)
N2: (-1.336,118.370,72.343)
N3: (0.582,118.760,73.512)
N7: (3.047,121.365,73.294)
N9: (2.653,119.527,74.495)
O5': (6.471,119.478,75.594)
O3': (5.280,115.901,74.658)
Image (generated by PyMOL):
PyMOL image
show in jmol