ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1G:A642:A719

Extra

PDB:
ATOM 1 O3' A A 641 -55.627 48.127 14.228 1.00 77.84 O
ATOM 2 P G A 642 -55.659 46.852 15.185 1.00 79.28 P
ATOM 3 OP1 G A 642 -56.677 47.103 16.226 1.00 76.43 O
ATOM 4 OP2 G A 642 -54.268 46.512 15.546 1.00 73.85 O
ATOM 5 O5' G A 642 -56.176 45.690 14.235 1.00 89.19 O
ATOM 6 C5' G A 642 -57.315 45.911 13.443 1.00 87.48 C
ATOM 7 C4' G A 642 -57.305 44.878 12.345 1.00 77.56 C
ATOM 8 O4' G A 642 -56.089 44.990 11.570 1.00 68.87 O
ATOM 9 C3' G A 642 -57.233 43.447 12.836 1.00 68.48 C
ATOM 10 O3' G A 642 -58.499 43.049 13.394 1.00 82.74 O
ATOM 11 C2' G A 642 -56.915 42.787 11.495 1.00 70.26 C
ATOM 12 O2' G A 642 -58.064 42.642 10.680 1.00 77.29 O
ATOM 13 C1' G A 642 -55.914 43.774 10.877 1.00 63.32 C
ATOM 14 N9 G A 642 -54.540 43.318 11.043 1.00 65.39 N
ATOM 15 C8 G A 642 -53.709 43.556 12.108 1.00 73.92 C
ATOM 16 N7 G A 642 -52.537 42.992 11.986 1.00 81.76 N
ATOM 17 C5 G A 642 -52.591 42.326 10.766 1.00 79.83 C
ATOM 18 C6 G A 642 -51.617 41.535 10.097 1.00 76.01 C
ATOM 19 O6 G A 642 -50.463 41.243 10.450 1.00 76.98 O
ATOM 20 N1 G A 642 -52.092 41.059 8.879 1.00 70.50 N
ATOM 21 C2 G A 642 -53.345 41.309 8.376 1.00 75.07 C
ATOM 22 N2 G A 642 -53.619 40.756 7.185 1.00 78.36 N
ATOM 23 N3 G A 642 -54.265 42.044 8.991 1.00 70.48 N
ATOM 24 C4 G A 642 -53.822 42.521 10.178 1.00 71.03 C
ATOM 25 P A A 643 -58.617 42.338 14.833 1.00 93.84 P
ATOM 26 OP1 A A 643 -59.451 43.180 15.715 1.00 67.37 O
ATOM 27 OP2 A A 643 -57.260 41.931 15.282 1.00 88.79 O
ATOM 28 O5' A A 643 -59.448 41.018 14.471 1.00 91.16 O
TER

ATOM 1 O3' U B 718 -43.381 33.247 7.393 1.00 69.76 O
ATOM 2 P G B 719 -43.586 34.538 6.474 1.00 69.46 P
ATOM 3 OP1 G B 719 -42.670 34.409 5.315 1.00 55.50 O
ATOM 4 OP2 G B 719 -43.529 35.729 7.357 1.00 64.77 O
ATOM 5 O5' G B 719 -45.092 34.406 5.945 1.00 69.82 O
ATOM 6 C5' G B 719 -45.345 33.613 4.808 1.00 69.84 C
ATOM 7 C4' G B 719 -46.717 33.915 4.252 1.00 59.74 C
ATOM 8 O4' G B 719 -47.671 33.784 5.323 1.00 54.95 O
ATOM 9 C3' G B 719 -46.923 35.335 3.754 1.00 61.91 C
ATOM 10 O3' G B 719 -46.401 35.482 2.436 1.00 76.32 O
ATOM 11 C2' G B 719 -48.443 35.393 3.772 1.00 59.81 C
ATOM 12 O2' G B 719 -49.042 34.717 2.695 1.00 51.62 O
ATOM 13 C1' G B 719 -48.754 34.652 5.062 1.00 66.46 C
ATOM 14 N9 G B 719 -48.883 35.597 6.158 1.00 76.36 N
ATOM 15 C8 G B 719 -48.020 35.798 7.208 1.00 82.66 C
ATOM 16 N7 G B 719 -48.412 36.740 8.026 1.00 82.52 N
ATOM 17 C5 G B 719 -49.609 37.189 7.477 1.00 75.79 C
ATOM 18 C6 G B 719 -50.493 38.197 7.924 1.00 76.66 C
ATOM 19 O6 G B 719 -50.391 38.917 8.929 1.00 85.12 O
ATOM 20 N1 G B 719 -51.585 38.329 7.074 1.00 66.44 N
ATOM 21 C2 G B 719 -51.782 37.581 5.943 1.00 71.15 C
ATOM 22 N2 G B 719 -52.891 37.855 5.251 1.00 84.78 N
ATOM 23 N3 G B 719 -50.967 36.634 5.509 1.00 68.62 N
ATOM 24 C4 G B 719 -49.906 36.496 6.327 1.00 73.06 C
ATOM 25 P G B 720 -45.692 36.840 1.965 1.00 78.68 P
ATOM 26 OP1 G B 720 -45.074 36.603 0.641 1.00 65.13 O
ATOM 27 OP2 G B 720 -44.876 37.365 3.084 1.00 62.81 O
ATOM 28 O5' G B 720 -46.945 37.799 1.739 1.00 63.25 O
TER

Atoms:
OP1: (-56.677,47.103,16.226)
OP2: (-54.268,46.512,15.546)
C3': (-57.233,43.447,12.836)
C1': (-55.914,43.774,10.877)
C5': (-57.315,45.911,13.443)
O6: (-50.463,41.243,10.450)
O4': (-56.089,44.990,11.570)
C8: (-53.709,43.556,12.108)
C2: (-53.345,41.309,8.376)
C6: (-51.617,41.535,10.097)
C5: (-52.591,42.326,10.766)
C4: (-53.822,42.521,10.178)
P: (-55.659,46.852,15.185)
C4': (-57.305,44.878,12.345)
C2': (-56.915,42.787,11.495)
O2': (-58.064,42.642,10.680)
N1: (-52.092,41.059,8.879)
N2: (-53.619,40.756,7.185)
N3: (-54.265,42.044,8.991)
N7: (-52.537,42.992,11.986)
N9: (-54.540,43.318,11.043)
O5': (-56.176,45.690,14.235)
O3': (-58.499,43.049,13.394)
OP1: (-42.670,34.409,5.315)
OP2: (-43.529,35.729,7.357)
C3': (-46.923,35.335,3.754)
C1': (-48.754,34.652,5.062)
C5': (-45.345,33.613,4.808)
O6: (-50.391,38.917,8.929)
O4': (-47.671,33.784,5.323)
C8: (-48.020,35.798,7.208)
C2: (-51.782,37.581,5.943)
C6: (-50.493,38.197,7.924)
C5: (-49.609,37.189,7.477)
C4: (-49.906,36.496,6.327)
P: (-43.586,34.538,6.474)
C4': (-46.717,33.915,4.252)
C2': (-48.443,35.393,3.772)
O2': (-49.042,34.717,2.695)
N1: (-51.585,38.329,7.074)
N2: (-52.891,37.855,5.251)
N3: (-50.967,36.634,5.509)
N7: (-48.412,36.740,8.026)
N9: (-48.883,35.597,6.158)
O5': (-45.092,34.406,5.945)
O3': (-46.401,35.482,2.436)
Image (generated by PyMOL):
PyMOL image
show in jmol