ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHC:A642:A719

Extra

PDB:
ATOM 1 O3' A A 641 54.474 48.139 -13.520 1.00 96.14 O
ATOM 2 P G A 642 54.562 46.845 -14.451 1.00104.89 P
ATOM 3 OP1 G A 642 55.483 47.165 -15.569 1.00 98.71 O
ATOM 4 OP2 G A 642 53.175 46.436 -14.761 1.00102.88 O
ATOM 5 O5' G A 642 55.224 45.780 -13.490 1.00113.34 O
ATOM 6 C5' G A 642 56.190 46.169 -12.535 1.00110.81 C
ATOM 7 C4' G A 642 56.499 45.040 -11.595 1.00110.86 C
ATOM 8 O4' G A 642 55.506 44.987 -10.538 1.00107.90 O
ATOM 9 C3' G A 642 56.447 43.652 -12.199 1.00102.70 C
ATOM 10 O3' G A 642 57.591 43.331 -12.948 1.00104.16 O
ATOM 11 C2' G A 642 56.249 42.782 -10.979 1.00102.68 C
ATOM 12 O2' G A 642 57.454 42.674 -10.241 1.00107.55 O
ATOM 13 C1' G A 642 55.269 43.640 -10.183 1.00103.59 C
ATOM 14 N9 G A 642 53.882 43.313 -10.531 1.00 98.06 N
ATOM 15 C8 G A 642 53.246 43.640 -11.701 1.00 99.98 C
ATOM 16 N7 G A 642 52.026 43.196 -11.754 1.00 96.77 N
ATOM 17 C5 G A 642 51.859 42.533 -10.550 1.00 94.88 C
ATOM 18 C6 G A 642 50.733 41.844 -10.041 1.00 98.78 C
ATOM 19 O6 G A 642 49.622 41.683 -10.578 1.00104.34 O
ATOM 20 N1 G A 642 50.996 41.316 -8.777 1.00 93.36 N
ATOM 21 C2 G A 642 52.178 41.426 -8.101 1.00 87.65 C
ATOM 22 N2 G A 642 52.209 40.841 -6.906 1.00 84.72 N
ATOM 23 N3 G A 642 53.238 42.061 -8.562 1.00 93.01 N
ATOM 24 C4 G A 642 53.000 42.587 -9.783 1.00 96.85 C
ATOM 25 P A A 643 57.465 42.329 -14.187 1.00100.26 P
ATOM 26 OP1 A A 643 58.115 42.979 -15.353 1.00108.13 O
ATOM 27 OP2 A A 643 56.038 41.946 -14.288 1.00101.08 O
ATOM 28 O5' A A 643 58.332 41.083 -13.708 1.00104.28 O
TER

ATOM 1 O3' U B 718 42.488 33.482 -6.884 1.00 70.04 O
ATOM 2 P G B 719 42.463 34.926 -6.176 1.00 84.58 P
ATOM 3 OP1 G B 719 41.355 34.909 -5.180 1.00 78.16 O
ATOM 4 OP2 G B 719 42.444 35.936 -7.259 1.00 76.09 O
ATOM 5 O5' G B 719 43.864 34.981 -5.418 1.00 91.62 O
ATOM 6 C5' G B 719 44.160 34.069 -4.369 1.00 85.59 C
ATOM 7 C4' G B 719 45.610 34.150 -3.923 1.00 76.13 C
ATOM 8 O4' G B 719 46.507 34.006 -5.051 1.00 60.33 O
ATOM 9 C3' G B 719 46.059 35.445 -3.280 1.00 73.19 C
ATOM 10 O3' G B 719 45.590 35.600 -1.941 1.00 78.80 O
ATOM 11 C2' G B 719 47.571 35.319 -3.399 1.00 74.65 C
ATOM 12 O2' G B 719 48.075 34.395 -2.453 1.00 80.01 O
ATOM 13 C1' G B 719 47.707 34.687 -4.780 1.00 70.54 C
ATOM 14 N9 G B 719 47.916 35.703 -5.809 1.00 77.35 N
ATOM 15 C8 G B 719 47.095 36.041 -6.843 1.00 79.91 C
ATOM 16 N7 G B 719 47.581 37.016 -7.560 1.00 86.72 N
ATOM 17 C5 G B 719 48.787 37.340 -6.949 1.00 83.89 C
ATOM 18 C6 G B 719 49.756 38.320 -7.279 1.00 83.08 C
ATOM 19 O6 G B 719 49.743 39.130 -8.206 1.00 88.59 O
ATOM 20 N1 G B 719 50.823 38.299 -6.404 1.00 80.52 N
ATOM 21 C2 G B 719 50.936 37.449 -5.340 1.00 83.44 C
ATOM 22 N2 G B 719 52.040 37.590 -4.608 1.00 84.23 N
ATOM 23 N3 G B 719 50.048 36.530 -5.010 1.00 84.26 N
ATOM 24 C4 G B 719 49.004 36.533 -5.861 1.00 82.42 C
ATOM 25 P G B 720 44.659 36.857 -1.543 1.00 90.93 P
ATOM 26 OP1 G B 720 43.754 36.423 -0.441 1.00 88.56 O
ATOM 27 OP2 G B 720 44.058 37.361 -2.800 1.00101.52 O
ATOM 28 O5' G B 720 45.716 37.908 -0.991 1.00 91.18 O
TER

Atoms:
OP1: (55.483,47.165,-15.569)
OP2: (53.175,46.436,-14.761)
C3': (56.447,43.652,-12.199)
C1': (55.269,43.640,-10.183)
C5': (56.190,46.169,-12.535)
O6: (49.622,41.683,-10.578)
O4': (55.506,44.987,-10.538)
C8: (53.246,43.640,-11.701)
C2: (52.178,41.426,-8.101)
C6: (50.733,41.844,-10.041)
C5: (51.859,42.533,-10.550)
C4: (53.000,42.587,-9.783)
P: (54.562,46.845,-14.451)
C4': (56.499,45.040,-11.595)
C2': (56.249,42.782,-10.979)
O2': (57.454,42.674,-10.241)
N1: (50.996,41.316,-8.777)
N2: (52.209,40.841,-6.906)
N3: (53.238,42.061,-8.562)
N7: (52.026,43.196,-11.754)
N9: (53.882,43.313,-10.531)
O5': (55.224,45.780,-13.490)
O3': (57.591,43.331,-12.948)
OP1: (41.355,34.909,-5.180)
OP2: (42.444,35.936,-7.259)
C3': (46.059,35.445,-3.280)
C1': (47.707,34.687,-4.780)
C5': (44.160,34.069,-4.369)
O6: (49.743,39.130,-8.206)
O4': (46.507,34.006,-5.051)
C8: (47.095,36.041,-6.843)
C2: (50.936,37.449,-5.340)
C6: (49.756,38.320,-7.279)
C5: (48.787,37.340,-6.949)
C4: (49.004,36.533,-5.861)
P: (42.463,34.926,-6.176)
C4': (45.610,34.150,-3.923)
C2': (47.571,35.319,-3.399)
O2': (48.075,34.395,-2.453)
N1: (50.823,38.299,-6.404)
N2: (52.040,37.590,-4.608)
N3: (50.048,36.530,-5.010)
N7: (47.581,37.016,-7.560)
N9: (47.916,35.703,-5.809)
O5': (43.864,34.981,-5.418)
O3': (45.590,35.600,-1.941)
Image (generated by PyMOL):
PyMOL image
show in jmol