ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A662:A739

Extra

PDB:
ATOM 1 O3' A A 661 -51.296 50.771 11.506 1.00 28.45 O
ATOM 2 P G A 662 -51.314 49.357 12.281 1.00 4.76 P
ATOM 3 OP1 G A 662 -52.490 49.356 13.207 1.00 4.76 O
ATOM 4 OP2 G A 662 -49.953 49.135 12.835 1.00 4.76 O
ATOM 5 O5' G A 662 -51.569 48.362 11.103 1.00 4.76 O
ATOM 6 C5' G A 662 -52.762 48.452 10.374 1.00 4.76 C
ATOM 7 C4' G A 662 -52.885 47.309 9.438 1.00 4.76 C
ATOM 8 O4' G A 662 -51.959 47.464 8.337 1.00 4.76 O
ATOM 9 C3' G A 662 -52.510 45.968 9.997 1.00 4.76 C
ATOM 10 O3' G A 662 -53.480 45.451 10.876 1.00 4.76 O
ATOM 11 C2' G A 662 -52.367 45.193 8.729 1.00 4.76 C
ATOM 12 O2' G A 662 -53.639 45.036 8.136 1.00 4.76 O
ATOM 13 C1' G A 662 -51.576 46.194 7.893 1.00 4.76 C
ATOM 14 N9 G A 662 -50.135 46.046 8.102 1.00 4.82 N
ATOM 15 C8 G A 662 -49.393 46.533 9.131 1.00 4.82 C
ATOM 16 N7 G A 662 -48.141 46.194 9.022 1.00 4.82 N
ATOM 17 C5 G A 662 -48.051 45.417 7.862 1.00 4.82 C
ATOM 18 C6 G A 662 -46.948 44.736 7.212 1.00 4.82 C
ATOM 19 O6 G A 662 -45.732 44.637 7.498 1.00 4.82 O
ATOM 20 N1 G A 662 -47.387 44.091 6.048 1.00 4.82 N
ATOM 21 C2 G A 662 -48.685 44.092 5.576 1.00 4.82 C
ATOM 22 N2 G A 662 -48.887 43.416 4.434 1.00 4.82 N
ATOM 23 N3 G A 662 -49.701 44.696 6.178 1.00 4.82 N
ATOM 24 C4 G A 662 -49.306 45.333 7.295 1.00 4.82 C
ATOM 25 P A A 663 -53.017 44.748 12.229 1.00 29.08 P
ATOM 26 OP1 A A 663 -53.927 45.207 13.291 1.00 29.08 O
ATOM 27 OP2 A A 663 -51.563 44.982 12.374 1.00 29.08 O
ATOM 28 O5' A A 663 -53.284 43.234 11.923 1.00 29.08 O
TER

ATOM 1 O3' U B 738 -37.941 37.091 4.260 1.00 11.13 O
ATOM 2 P G B 739 -38.055 38.466 3.439 1.00 11.21 P
ATOM 3 OP1 G B 739 -36.969 38.465 2.437 1.00 11.21 O
ATOM 4 OP2 G B 739 -38.108 39.561 4.424 1.00 11.21 O
ATOM 5 O5' G B 739 -39.462 38.329 2.720 1.00 11.21 O
ATOM 6 C5' G B 739 -39.666 37.345 1.731 1.00 11.21 C
ATOM 7 C4' G B 739 -41.010 37.490 1.083 1.00 11.21 C
ATOM 8 O4' G B 739 -42.048 37.188 2.047 1.00 11.21 O
ATOM 9 C3' G B 739 -41.376 38.885 0.607 1.00 11.21 C
ATOM 10 O3' G B 739 -40.769 39.247 -0.611 1.00 11.21 O
ATOM 11 C2' G B 739 -42.888 38.804 0.535 1.00 11.21 C
ATOM 12 O2' G B 739 -43.308 38.045 -0.588 1.00 11.21 O
ATOM 13 C1' G B 739 -43.177 38.010 1.799 1.00 11.21 C
ATOM 14 N9 G B 739 -43.358 38.911 2.940 1.00 11.41 N
ATOM 15 C8 G B 739 -42.467 39.253 3.925 1.00 11.41 C
ATOM 16 N7 G B 739 -42.963 40.140 4.751 1.00 11.41 N
ATOM 17 C5 G B 739 -44.240 40.398 4.263 1.00 11.41 C
ATOM 18 C6 G B 739 -45.256 41.262 4.748 1.00 11.41 C
ATOM 19 O6 G B 739 -45.252 42.020 5.735 1.00 11.41 O
ATOM 20 N1 G B 739 -46.371 41.179 3.924 1.00 11.41 N
ATOM 21 C2 G B 739 -46.486 40.392 2.792 1.00 11.41 C
ATOM 22 N2 G B 739 -47.642 40.472 2.124 1.00 11.41 N
ATOM 23 N3 G B 739 -45.554 39.580 2.340 1.00 11.41 N
ATOM 24 C4 G B 739 -44.479 39.649 3.132 1.00 11.41 C
ATOM 25 P G B 740 -40.537 40.802 -0.955 1.00 16.68 P
ATOM 26 OP1 G B 740 -39.853 40.856 -2.286 1.00 16.68 O
ATOM 27 OP2 G B 740 -39.869 41.417 0.229 1.00 16.68 O
ATOM 28 O5' G B 740 -42.027 41.354 -1.091 1.00 16.68 O
TER

Atoms:
OP1: (-52.490,49.356,13.207)
OP2: (-49.953,49.135,12.835)
C3': (-52.510,45.968,9.997)
C1': (-51.576,46.194,7.893)
C5': (-52.762,48.452,10.374)
O6: (-45.732,44.637,7.498)
O4': (-51.959,47.464,8.337)
C8: (-49.393,46.533,9.131)
C2: (-48.685,44.092,5.576)
C6: (-46.948,44.736,7.212)
C5: (-48.051,45.417,7.862)
C4: (-49.306,45.333,7.295)
P: (-51.314,49.357,12.281)
C4': (-52.885,47.309,9.438)
C2': (-52.367,45.193,8.729)
O2': (-53.639,45.036,8.136)
N1: (-47.387,44.091,6.048)
N2: (-48.887,43.416,4.434)
N3: (-49.701,44.696,6.178)
N7: (-48.141,46.194,9.022)
N9: (-50.135,46.046,8.102)
O5': (-51.569,48.362,11.103)
O3': (-53.480,45.451,10.876)
OP1: (-36.969,38.465,2.437)
OP2: (-38.108,39.561,4.424)
C3': (-41.376,38.885,0.607)
C1': (-43.177,38.010,1.799)
C5': (-39.666,37.345,1.731)
O6: (-45.252,42.020,5.735)
O4': (-42.048,37.188,2.047)
C8: (-42.467,39.253,3.925)
C2: (-46.486,40.392,2.792)
C6: (-45.256,41.262,4.748)
C5: (-44.240,40.398,4.263)
C4: (-44.479,39.649,3.132)
P: (-38.055,38.466,3.439)
C4': (-41.010,37.490,1.083)
C2': (-42.888,38.804,0.535)
O2': (-43.308,38.045,-0.588)
N1: (-46.371,41.179,3.924)
N2: (-47.642,40.472,2.124)
N3: (-45.554,39.580,2.340)
N7: (-42.963,40.140,4.751)
N9: (-43.358,38.911,2.940)
O5': (-39.462,38.329,2.720)
O3': (-40.769,39.247,-0.611)
Image (generated by PyMOL):
PyMOL image
show in jmol