ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L3C:Q97:Q122

Extra

PDB:
ATOM 1 O3' U A 96 -1.438 37.270 30.973 1.00 76.13 O
ATOM 2 P A A 97 -1.599 37.442 32.560 1.00 74.45 P
ATOM 3 OP1 A A 97 -2.559 36.408 33.010 1.00 74.67 O
ATOM 4 OP2 A A 97 -1.850 38.870 32.862 1.00 74.57 O
ATOM 5 O5' A A 97 -0.158 37.066 33.142 1.00 72.41 O
ATOM 6 C5' A A 97 0.403 35.772 32.942 1.00 69.00 C
ATOM 7 C4' A A 97 1.907 35.866 32.767 1.00 66.21 C
ATOM 8 O4' A A 97 2.459 36.693 33.819 1.00 65.26 O
ATOM 9 C3' A A 97 2.636 34.538 32.873 1.00 64.83 C
ATOM 10 O3' A A 97 2.733 33.943 31.582 1.00 63.44 O
ATOM 11 C2' A A 97 3.999 34.938 33.434 1.00 64.50 C
ATOM 12 O2' A A 97 4.927 35.305 32.432 1.00 64.28 O
ATOM 13 C1' A A 97 3.676 36.149 34.298 1.00 64.34 C
ATOM 14 N9 A A 97 3.562 35.915 35.743 1.00 63.55 N
ATOM 15 C8 A A 97 2.422 35.658 36.454 1.00 63.16 C
ATOM 16 N7 A A 97 2.617 35.509 37.742 1.00 62.85 N
ATOM 17 C5 A A 97 3.980 35.683 37.893 1.00 62.73 C
ATOM 18 C6 A A 97 4.829 35.653 39.024 1.00 62.65 C
ATOM 19 N6 A A 97 4.392 35.419 40.264 1.00 62.65 N
ATOM 20 N1 A A 97 6.151 35.870 38.836 1.00 62.69 N
ATOM 21 C2 A A 97 6.594 36.104 37.592 1.00 62.93 C
ATOM 22 N3 A A 97 5.891 36.161 36.457 1.00 63.19 N
ATOM 23 C4 A A 97 4.579 35.940 36.673 1.00 63.05 C
ATOM 24 P A A 98 2.322 32.413 31.344 1.00 62.49 P
ATOM 25 OP1 A A 98 2.195 32.211 29.882 1.00 62.23 O
ATOM 26 OP2 A A 98 1.191 32.082 32.242 1.00 62.25 O
ATOM 27 O5' A A 98 3.614 31.609 31.840 1.00 61.72 O
TER

ATOM 1 O3' C B 121 -3.014 35.434 42.577 1.00 61.92 O
ATOM 2 P A B 122 -2.898 36.893 41.920 1.00 61.26 P
ATOM 3 OP1 A B 122 -3.665 37.835 42.768 1.00 61.07 O
ATOM 4 OP2 A B 122 -3.175 36.808 40.465 1.00 60.90 O
ATOM 5 O5' A B 122 -1.341 37.195 42.105 1.00 60.08 O
ATOM 6 C5' A B 122 -0.863 38.517 42.242 1.00 58.33 C
ATOM 7 C4' A B 122 0.593 38.466 42.647 1.00 56.83 C
ATOM 8 O4' A B 122 1.347 37.751 41.646 1.00 56.60 O
ATOM 9 C3' A B 122 1.280 39.811 42.693 1.00 56.04 C
ATOM 10 O3' A B 122 0.957 40.454 43.909 1.00 55.13 O
ATOM 11 C2' A B 122 2.747 39.412 42.592 1.00 56.00 C
ATOM 12 O2' A B 122 3.287 38.964 43.820 1.00 56.44 O
ATOM 13 C1' A B 122 2.677 38.239 41.624 1.00 55.99 C
ATOM 14 N9 A B 122 3.039 38.511 40.234 1.00 55.92 N
ATOM 15 C8 A B 122 2.204 38.493 39.151 1.00 55.99 C
ATOM 16 N7 A B 122 2.797 38.749 38.009 1.00 56.05 N
ATOM 17 C5 A B 122 4.119 38.947 38.364 1.00 55.96 C
ATOM 18 C6 A B 122 5.274 39.251 37.608 1.00 55.84 C
ATOM 19 N6 A B 122 5.266 39.422 36.283 1.00 55.80 N
ATOM 20 N1 A B 122 6.445 39.381 38.269 1.00 56.02 N
ATOM 21 C2 A B 122 6.458 39.208 39.601 1.00 56.35 C
ATOM 22 N3 A B 122 5.442 38.916 40.416 1.00 56.37 N
ATOM 23 C4 A B 122 4.288 38.799 39.732 1.00 56.12 C
ATOM 24 P A B 123 0.401 41.949 43.857 1.00 54.48 P
ATOM 25 OP1 A B 123 -0.267 42.247 45.143 1.00 54.38 O
ATOM 26 OP2 A B 123 -0.331 42.115 42.579 1.00 54.71 O
ATOM 27 O5' A B 123 1.748 42.806 43.803 1.00 54.15 O
TER

Atoms:
OP1: (-2.559,36.408,33.010)
OP2: (-1.850,38.870,32.862)
C3': (2.636,34.538,32.873)
C1': (3.676,36.149,34.298)
C5': (0.403,35.772,32.942)
O4': (2.459,36.693,33.819)
C8: (2.422,35.658,36.454)
O2': (4.927,35.305,32.432)
C6: (4.829,35.653,39.024)
C5: (3.980,35.683,37.893)
C4: (4.579,35.940,36.673)
P: (-1.599,37.442,32.560)
C4': (1.907,35.866,32.767)
C2': (3.999,34.938,33.434)
C2: (6.594,36.104,37.592)
N1: (6.151,35.870,38.836)
N3: (5.891,36.161,36.457)
N6: (4.392,35.419,40.264)
N7: (2.617,35.509,37.742)
N9: (3.562,35.915,35.743)
O5': (-0.158,37.066,33.142)
O3': (2.733,33.943,31.582)
OP1: (-3.665,37.835,42.768)
OP2: (-3.175,36.808,40.465)
C3': (1.280,39.811,42.693)
C1': (2.677,38.239,41.624)
C5': (-0.863,38.517,42.242)
O4': (1.347,37.751,41.646)
C8: (2.204,38.493,39.151)
O2': (3.287,38.964,43.820)
C6: (5.274,39.251,37.608)
C5: (4.119,38.947,38.364)
C4: (4.288,38.799,39.732)
P: (-2.898,36.893,41.920)
C4': (0.593,38.466,42.647)
C2': (2.747,39.412,42.592)
C2: (6.458,39.208,39.601)
N1: (6.445,39.381,38.269)
N3: (5.442,38.916,40.416)
N6: (5.266,39.422,36.283)
N7: (2.797,38.749,38.009)
N9: (3.039,38.511,40.234)
O5': (-1.341,37.195,42.105)
O3': (0.957,40.454,43.909)
Image (generated by PyMOL):
PyMOL image
show in jmol