Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2R8S:R49:R123
Extra
PDB:
ATOM 1 O3' G A 48 100.343 -38.816 7.501 1.00 55.83 O
ATOM 2 P A A 49 101.942 -38.820 7.349 1.00 57.19 P
ATOM 3 OP1 A A 49 102.245 -38.925 5.908 1.00 56.98 O
ATOM 4 OP2 A A 49 102.523 -39.789 8.318 1.00 54.80 O
ATOM 5 O5' A A 49 102.303 -37.340 7.844 1.00 56.71 O
ATOM 6 C5' A A 49 103.616 -36.805 7.775 1.00 54.52 C
ATOM 7 C4' A A 49 103.566 -35.378 7.265 1.00 52.23 C
ATOM 8 O4' A A 49 103.152 -35.410 5.883 1.00 53.95 O
ATOM 9 C3' A A 49 102.550 -34.452 7.916 1.00 53.05 C
ATOM 10 O3' A A 49 103.075 -33.877 9.113 1.00 52.26 O
ATOM 11 C2' A A 49 102.275 -33.411 6.831 1.00 53.09 C
ATOM 12 O2' A A 49 103.191 -32.328 6.831 1.00 52.05 O
ATOM 13 C1' A A 49 102.400 -34.250 5.566 1.00 51.61 C
ATOM 14 N9 A A 49 101.150 -34.681 4.938 1.00 52.17 N
ATOM 15 C8 A A 49 100.685 -35.964 4.803 1.00 50.21 C
ATOM 16 N7 A A 49 99.547 -36.041 4.161 1.00 49.74 N
ATOM 17 C5 A A 49 99.245 -34.730 3.837 1.00 51.03 C
ATOM 18 C6 A A 49 98.164 -34.137 3.141 1.00 51.69 C
ATOM 19 N6 A A 49 97.142 -34.836 2.633 1.00 50.80 N
ATOM 20 N1 A A 49 98.173 -32.787 3.000 1.00 52.29 N
ATOM 21 C2 A A 49 99.189 -32.071 3.513 1.00 52.24 C
ATOM 22 N3 A A 49 100.262 -32.523 4.172 1.00 53.72 N
ATOM 23 C4 A A 49 100.226 -33.871 4.310 1.00 52.87 C
ATOM 24 P A A 50 102.158 -33.837 10.422 1.00 52.20 P
ATOM 25 OP1 A A 50 103.034 -33.426 11.542 1.00 53.29 O
ATOM 26 OP2 A A 50 101.346 -35.077 10.490 1.00 47.62 O
ATOM 27 O5' A A 50 101.176 -32.613 10.124 1.00 52.21 O
TER
ATOM 1 O3' A B 122 102.005 -29.354 0.785 1.00 56.96 O
ATOM 2 P A B 123 103.417 -29.677 1.482 1.00 59.23 P
ATOM 3 OP1 A B 123 103.276 -29.469 2.943 1.00 57.94 O
ATOM 4 OP2 A B 123 104.474 -28.955 0.738 1.00 58.17 O
ATOM 5 O5' A B 123 103.601 -31.243 1.173 1.00 61.08 O
ATOM 6 C5' A B 123 104.222 -32.154 2.088 1.00 59.97 C
ATOM 7 C4' A B 123 103.740 -33.577 1.860 1.00 59.79 C
ATOM 8 O4' A B 123 102.357 -33.707 2.261 1.00 59.08 O
ATOM 9 C3' A B 123 103.719 -34.053 0.418 1.00 61.52 C
ATOM 10 O3' A B 123 105.010 -34.465 0.006 1.00 64.46 O
ATOM 11 C2' A B 123 102.719 -35.200 0.496 1.00 60.50 C
ATOM 12 O2' A B 123 103.227 -36.362 1.121 1.00 61.03 O
ATOM 13 C1' A B 123 101.656 -34.569 1.378 1.00 58.66 C
ATOM 14 N9 A B 123 100.624 -33.811 0.667 1.00 58.91 N
ATOM 15 C8 A B 123 100.434 -32.453 0.681 1.00 58.71 C
ATOM 16 N7 A B 123 99.413 -32.050 -0.041 1.00 59.11 N
ATOM 17 C5 A B 123 98.890 -33.216 -0.572 1.00 58.00 C
ATOM 18 C6 A B 123 97.792 -33.466 -1.432 1.00 58.07 C
ATOM 19 N6 A B 123 96.996 -32.507 -1.925 1.00 57.69 N
ATOM 20 N1 A B 123 97.540 -34.754 -1.767 1.00 58.21 N
ATOM 21 C2 A B 123 98.337 -35.717 -1.274 1.00 58.02 C
ATOM 22 N3 A B 123 99.393 -35.601 -0.460 1.00 57.20 N
ATOM 23 C4 A B 123 99.624 -34.314 -0.141 1.00 57.74 C
ATOM 24 P G B 124 105.533 -34.113 -1.466 1.00 67.21 P
ATOM 25 OP1 G B 124 106.807 -34.842 -1.668 1.00 67.33 O
ATOM 26 OP2 G B 124 105.476 -32.643 -1.639 1.00 67.56 O
ATOM 27 O5' G B 124 104.397 -34.733 -2.405 1.00 67.71 O
TER
ATOM 2 P A A 49 101.942 -38.820 7.349 1.00 57.19 P
ATOM 3 OP1 A A 49 102.245 -38.925 5.908 1.00 56.98 O
ATOM 4 OP2 A A 49 102.523 -39.789 8.318 1.00 54.80 O
ATOM 5 O5' A A 49 102.303 -37.340 7.844 1.00 56.71 O
ATOM 6 C5' A A 49 103.616 -36.805 7.775 1.00 54.52 C
ATOM 7 C4' A A 49 103.566 -35.378 7.265 1.00 52.23 C
ATOM 8 O4' A A 49 103.152 -35.410 5.883 1.00 53.95 O
ATOM 9 C3' A A 49 102.550 -34.452 7.916 1.00 53.05 C
ATOM 10 O3' A A 49 103.075 -33.877 9.113 1.00 52.26 O
ATOM 11 C2' A A 49 102.275 -33.411 6.831 1.00 53.09 C
ATOM 12 O2' A A 49 103.191 -32.328 6.831 1.00 52.05 O
ATOM 13 C1' A A 49 102.400 -34.250 5.566 1.00 51.61 C
ATOM 14 N9 A A 49 101.150 -34.681 4.938 1.00 52.17 N
ATOM 15 C8 A A 49 100.685 -35.964 4.803 1.00 50.21 C
ATOM 16 N7 A A 49 99.547 -36.041 4.161 1.00 49.74 N
ATOM 17 C5 A A 49 99.245 -34.730 3.837 1.00 51.03 C
ATOM 18 C6 A A 49 98.164 -34.137 3.141 1.00 51.69 C
ATOM 19 N6 A A 49 97.142 -34.836 2.633 1.00 50.80 N
ATOM 20 N1 A A 49 98.173 -32.787 3.000 1.00 52.29 N
ATOM 21 C2 A A 49 99.189 -32.071 3.513 1.00 52.24 C
ATOM 22 N3 A A 49 100.262 -32.523 4.172 1.00 53.72 N
ATOM 23 C4 A A 49 100.226 -33.871 4.310 1.00 52.87 C
ATOM 24 P A A 50 102.158 -33.837 10.422 1.00 52.20 P
ATOM 25 OP1 A A 50 103.034 -33.426 11.542 1.00 53.29 O
ATOM 26 OP2 A A 50 101.346 -35.077 10.490 1.00 47.62 O
ATOM 27 O5' A A 50 101.176 -32.613 10.124 1.00 52.21 O
TER
ATOM 1 O3' A B 122 102.005 -29.354 0.785 1.00 56.96 O
ATOM 2 P A B 123 103.417 -29.677 1.482 1.00 59.23 P
ATOM 3 OP1 A B 123 103.276 -29.469 2.943 1.00 57.94 O
ATOM 4 OP2 A B 123 104.474 -28.955 0.738 1.00 58.17 O
ATOM 5 O5' A B 123 103.601 -31.243 1.173 1.00 61.08 O
ATOM 6 C5' A B 123 104.222 -32.154 2.088 1.00 59.97 C
ATOM 7 C4' A B 123 103.740 -33.577 1.860 1.00 59.79 C
ATOM 8 O4' A B 123 102.357 -33.707 2.261 1.00 59.08 O
ATOM 9 C3' A B 123 103.719 -34.053 0.418 1.00 61.52 C
ATOM 10 O3' A B 123 105.010 -34.465 0.006 1.00 64.46 O
ATOM 11 C2' A B 123 102.719 -35.200 0.496 1.00 60.50 C
ATOM 12 O2' A B 123 103.227 -36.362 1.121 1.00 61.03 O
ATOM 13 C1' A B 123 101.656 -34.569 1.378 1.00 58.66 C
ATOM 14 N9 A B 123 100.624 -33.811 0.667 1.00 58.91 N
ATOM 15 C8 A B 123 100.434 -32.453 0.681 1.00 58.71 C
ATOM 16 N7 A B 123 99.413 -32.050 -0.041 1.00 59.11 N
ATOM 17 C5 A B 123 98.890 -33.216 -0.572 1.00 58.00 C
ATOM 18 C6 A B 123 97.792 -33.466 -1.432 1.00 58.07 C
ATOM 19 N6 A B 123 96.996 -32.507 -1.925 1.00 57.69 N
ATOM 20 N1 A B 123 97.540 -34.754 -1.767 1.00 58.21 N
ATOM 21 C2 A B 123 98.337 -35.717 -1.274 1.00 58.02 C
ATOM 22 N3 A B 123 99.393 -35.601 -0.460 1.00 57.20 N
ATOM 23 C4 A B 123 99.624 -34.314 -0.141 1.00 57.74 C
ATOM 24 P G B 124 105.533 -34.113 -1.466 1.00 67.21 P
ATOM 25 OP1 G B 124 106.807 -34.842 -1.668 1.00 67.33 O
ATOM 26 OP2 G B 124 105.476 -32.643 -1.639 1.00 67.56 O
ATOM 27 O5' G B 124 104.397 -34.733 -2.405 1.00 67.71 O
TER
Atoms:
OP1: (102.245,-38.925,5.908)
OP2: (102.523,-39.789,8.318)
C3': (102.550,-34.452,7.916)
C1': (102.400,-34.250,5.566)
C5': (103.616,-36.805,7.775)
O4': (103.152,-35.410,5.883)
C8: (100.685,-35.964,4.803)
O2': (103.191,-32.328,6.831)
C6: (98.164,-34.137,3.141)
C5: (99.245,-34.730,3.837)
C4: (100.226,-33.871,4.310)
P: (101.942,-38.820,7.349)
C4': (103.566,-35.378,7.265)
C2': (102.275,-33.411,6.831)
C2: (99.189,-32.071,3.513)
N1: (98.173,-32.787,3.000)
N3: (100.262,-32.523,4.172)
N6: (97.142,-34.836,2.633)
N7: (99.547,-36.041,4.161)
N9: (101.150,-34.681,4.938)
O5': (102.303,-37.340,7.844)
O3': (103.075,-33.877,9.113)
OP2: (102.523,-39.789,8.318)
C3': (102.550,-34.452,7.916)
C1': (102.400,-34.250,5.566)
C5': (103.616,-36.805,7.775)
O4': (103.152,-35.410,5.883)
C8: (100.685,-35.964,4.803)
O2': (103.191,-32.328,6.831)
C6: (98.164,-34.137,3.141)
C5: (99.245,-34.730,3.837)
C4: (100.226,-33.871,4.310)
P: (101.942,-38.820,7.349)
C4': (103.566,-35.378,7.265)
C2': (102.275,-33.411,6.831)
C2: (99.189,-32.071,3.513)
N1: (98.173,-32.787,3.000)
N3: (100.262,-32.523,4.172)
N6: (97.142,-34.836,2.633)
N7: (99.547,-36.041,4.161)
N9: (101.150,-34.681,4.938)
O5': (102.303,-37.340,7.844)
O3': (103.075,-33.877,9.113)
OP1: (103.276,-29.469,2.943)
OP2: (104.474,-28.955,0.738)
C3': (103.719,-34.053,0.418)
C1': (101.656,-34.569,1.378)
C5': (104.222,-32.154,2.088)
O4': (102.357,-33.707,2.261)
C8: (100.434,-32.453,0.681)
O2': (103.227,-36.362,1.121)
C6: (97.792,-33.466,-1.432)
C5: (98.890,-33.216,-0.572)
C4: (99.624,-34.314,-0.141)
P: (103.417,-29.677,1.482)
C4': (103.740,-33.577,1.860)
C2': (102.719,-35.200,0.496)
C2: (98.337,-35.717,-1.274)
N1: (97.540,-34.754,-1.767)
N3: (99.393,-35.601,-0.460)
N6: (96.996,-32.507,-1.925)
N7: (99.413,-32.050,-0.041)
N9: (100.624,-33.811,0.667)
O5': (103.601,-31.243,1.173)
O3': (105.010,-34.465,0.006)
OP2: (104.474,-28.955,0.738)
C3': (103.719,-34.053,0.418)
C1': (101.656,-34.569,1.378)
C5': (104.222,-32.154,2.088)
O4': (102.357,-33.707,2.261)
C8: (100.434,-32.453,0.681)
O2': (103.227,-36.362,1.121)
C6: (97.792,-33.466,-1.432)
C5: (98.890,-33.216,-0.572)
C4: (99.624,-34.314,-0.141)
P: (103.417,-29.677,1.482)
C4': (103.740,-33.577,1.860)
C2': (102.719,-35.200,0.496)
C2: (98.337,-35.717,-1.274)
N1: (97.540,-34.754,-1.767)
N3: (99.393,-35.601,-0.460)
N6: (96.996,-32.507,-1.925)
N7: (99.413,-32.050,-0.041)
N9: (100.624,-33.811,0.667)
O5': (103.601,-31.243,1.173)
O3': (105.010,-34.465,0.006)
Image (generated by PyMOL):