Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IRW:R25:R54
Extra
PDB:
ATOM 1 O3' G A 24 -4.048 -30.474 20.892 1.00 51.36 O
ATOM 2 P A A 25 -5.086 -29.902 21.975 1.00 52.70 P
ATOM 3 OP1 A A 25 -4.666 -30.421 23.290 1.00 53.43 O
ATOM 4 OP2 A A 25 -6.463 -30.138 21.480 1.00 51.85 O
ATOM 5 O5' A A 25 -4.854 -28.324 21.968 1.00 51.32 O
ATOM 6 C5' A A 25 -5.556 -27.538 22.905 1.00 49.30 C
ATOM 7 C4' A A 25 -4.709 -26.355 23.299 1.00 48.49 C
ATOM 8 O4' A A 25 -3.579 -26.806 24.080 1.00 47.54 O
ATOM 9 C3' A A 25 -4.090 -25.642 22.118 1.00 47.73 C
ATOM 10 O3' A A 25 -5.018 -24.715 21.624 1.00 48.26 O
ATOM 11 C2' A A 25 -2.903 -24.952 22.772 1.00 47.88 C
ATOM 12 O2' A A 25 -3.287 -23.773 23.452 1.00 48.96 O
ATOM 13 C1' A A 25 -2.455 -26.004 23.783 1.00 46.83 C
ATOM 14 N9 A A 25 -1.387 -26.872 23.302 1.00 45.20 N
ATOM 15 C8 A A 25 -1.463 -28.216 23.079 1.00 45.12 C
ATOM 16 N7 A A 25 -0.338 -28.742 22.648 1.00 44.85 N
ATOM 17 C5 A A 25 0.534 -27.669 22.588 1.00 41.91 C
ATOM 18 C6 A A 25 1.886 -27.564 22.210 1.00 39.30 C
ATOM 19 N6 A A 25 2.619 -28.602 21.804 1.00 39.19 N
ATOM 20 N1 A A 25 2.459 -26.348 22.266 1.00 38.76 N
ATOM 21 C2 A A 25 1.723 -25.308 22.670 1.00 40.66 C
ATOM 22 N3 A A 25 0.445 -25.283 23.049 1.00 43.01 N
ATOM 23 C4 A A 25 -0.096 -26.508 22.987 1.00 43.58 C
ATOM 24 P A A 26 -5.218 -24.598 20.052 1.00 50.24 P
ATOM 25 OP1 A A 26 -6.470 -23.854 19.784 1.00 50.92 O
ATOM 26 OP2 A A 26 -5.005 -25.947 19.480 1.00 50.56 O
ATOM 27 O5' A A 26 -3.995 -23.669 19.633 1.00 46.54 O
TER
ATOM 1 O3' A B 53 3.565 -22.883 26.387 1.00 69.34 O
ATOM 2 P A B 54 2.577 -22.060 27.340 1.00 70.12 P
ATOM 3 OP1 A B 54 1.802 -21.115 26.499 1.00 70.76 O
ATOM 4 OP2 A B 54 3.388 -21.547 28.466 1.00 70.03 O
ATOM 5 O5' A B 54 1.596 -23.203 27.907 1.00 67.05 O
ATOM 6 C5' A B 54 0.487 -23.683 27.135 1.00 64.41 C
ATOM 7 C4' A B 54 -0.136 -24.898 27.804 1.00 63.06 C
ATOM 8 O4' A B 54 -0.580 -25.861 26.807 1.00 63.66 O
ATOM 9 C3' A B 54 0.810 -25.684 28.704 1.00 62.70 C
ATOM 10 O3' A B 54 0.712 -25.225 30.042 1.00 61.63 O
ATOM 11 C2' A B 54 0.266 -27.097 28.540 1.00 63.29 C
ATOM 12 O2' A B 54 -0.984 -27.270 29.173 1.00 63.97 O
ATOM 13 C1' A B 54 0.081 -27.086 27.040 1.00 62.98 C
ATOM 14 N9 A B 54 1.352 -27.003 26.339 1.00 63.62 N
ATOM 15 C8 A B 54 2.072 -25.866 26.109 1.00 62.72 C
ATOM 16 N7 A B 54 3.188 -26.068 25.453 1.00 62.25 N
ATOM 17 C5 A B 54 3.201 -27.432 25.233 1.00 63.50 C
ATOM 18 C6 A B 54 4.125 -28.273 24.586 1.00 64.67 C
ATOM 19 N6 A B 54 5.251 -27.824 24.020 1.00 65.62 N
ATOM 20 N1 A B 54 3.844 -29.593 24.544 1.00 65.24 N
ATOM 21 C2 A B 54 2.713 -30.031 25.113 1.00 66.08 C
ATOM 22 N3 A B 54 1.768 -29.336 25.751 1.00 66.30 N
ATOM 23 C4 A B 54 2.078 -28.028 25.777 1.00 64.66 C
ATOM 24 P A B 55 1.693 -25.811 31.162 1.00 59.90 P
ATOM 25 OP1 A B 55 1.008 -25.702 32.469 1.00 59.95 O
ATOM 26 OP2 A B 55 3.023 -25.190 30.972 1.00 60.87 O
ATOM 27 O5' A B 55 1.810 -27.356 30.764 1.00 56.02 O
TER
ATOM 2 P A A 25 -5.086 -29.902 21.975 1.00 52.70 P
ATOM 3 OP1 A A 25 -4.666 -30.421 23.290 1.00 53.43 O
ATOM 4 OP2 A A 25 -6.463 -30.138 21.480 1.00 51.85 O
ATOM 5 O5' A A 25 -4.854 -28.324 21.968 1.00 51.32 O
ATOM 6 C5' A A 25 -5.556 -27.538 22.905 1.00 49.30 C
ATOM 7 C4' A A 25 -4.709 -26.355 23.299 1.00 48.49 C
ATOM 8 O4' A A 25 -3.579 -26.806 24.080 1.00 47.54 O
ATOM 9 C3' A A 25 -4.090 -25.642 22.118 1.00 47.73 C
ATOM 10 O3' A A 25 -5.018 -24.715 21.624 1.00 48.26 O
ATOM 11 C2' A A 25 -2.903 -24.952 22.772 1.00 47.88 C
ATOM 12 O2' A A 25 -3.287 -23.773 23.452 1.00 48.96 O
ATOM 13 C1' A A 25 -2.455 -26.004 23.783 1.00 46.83 C
ATOM 14 N9 A A 25 -1.387 -26.872 23.302 1.00 45.20 N
ATOM 15 C8 A A 25 -1.463 -28.216 23.079 1.00 45.12 C
ATOM 16 N7 A A 25 -0.338 -28.742 22.648 1.00 44.85 N
ATOM 17 C5 A A 25 0.534 -27.669 22.588 1.00 41.91 C
ATOM 18 C6 A A 25 1.886 -27.564 22.210 1.00 39.30 C
ATOM 19 N6 A A 25 2.619 -28.602 21.804 1.00 39.19 N
ATOM 20 N1 A A 25 2.459 -26.348 22.266 1.00 38.76 N
ATOM 21 C2 A A 25 1.723 -25.308 22.670 1.00 40.66 C
ATOM 22 N3 A A 25 0.445 -25.283 23.049 1.00 43.01 N
ATOM 23 C4 A A 25 -0.096 -26.508 22.987 1.00 43.58 C
ATOM 24 P A A 26 -5.218 -24.598 20.052 1.00 50.24 P
ATOM 25 OP1 A A 26 -6.470 -23.854 19.784 1.00 50.92 O
ATOM 26 OP2 A A 26 -5.005 -25.947 19.480 1.00 50.56 O
ATOM 27 O5' A A 26 -3.995 -23.669 19.633 1.00 46.54 O
TER
ATOM 1 O3' A B 53 3.565 -22.883 26.387 1.00 69.34 O
ATOM 2 P A B 54 2.577 -22.060 27.340 1.00 70.12 P
ATOM 3 OP1 A B 54 1.802 -21.115 26.499 1.00 70.76 O
ATOM 4 OP2 A B 54 3.388 -21.547 28.466 1.00 70.03 O
ATOM 5 O5' A B 54 1.596 -23.203 27.907 1.00 67.05 O
ATOM 6 C5' A B 54 0.487 -23.683 27.135 1.00 64.41 C
ATOM 7 C4' A B 54 -0.136 -24.898 27.804 1.00 63.06 C
ATOM 8 O4' A B 54 -0.580 -25.861 26.807 1.00 63.66 O
ATOM 9 C3' A B 54 0.810 -25.684 28.704 1.00 62.70 C
ATOM 10 O3' A B 54 0.712 -25.225 30.042 1.00 61.63 O
ATOM 11 C2' A B 54 0.266 -27.097 28.540 1.00 63.29 C
ATOM 12 O2' A B 54 -0.984 -27.270 29.173 1.00 63.97 O
ATOM 13 C1' A B 54 0.081 -27.086 27.040 1.00 62.98 C
ATOM 14 N9 A B 54 1.352 -27.003 26.339 1.00 63.62 N
ATOM 15 C8 A B 54 2.072 -25.866 26.109 1.00 62.72 C
ATOM 16 N7 A B 54 3.188 -26.068 25.453 1.00 62.25 N
ATOM 17 C5 A B 54 3.201 -27.432 25.233 1.00 63.50 C
ATOM 18 C6 A B 54 4.125 -28.273 24.586 1.00 64.67 C
ATOM 19 N6 A B 54 5.251 -27.824 24.020 1.00 65.62 N
ATOM 20 N1 A B 54 3.844 -29.593 24.544 1.00 65.24 N
ATOM 21 C2 A B 54 2.713 -30.031 25.113 1.00 66.08 C
ATOM 22 N3 A B 54 1.768 -29.336 25.751 1.00 66.30 N
ATOM 23 C4 A B 54 2.078 -28.028 25.777 1.00 64.66 C
ATOM 24 P A B 55 1.693 -25.811 31.162 1.00 59.90 P
ATOM 25 OP1 A B 55 1.008 -25.702 32.469 1.00 59.95 O
ATOM 26 OP2 A B 55 3.023 -25.190 30.972 1.00 60.87 O
ATOM 27 O5' A B 55 1.810 -27.356 30.764 1.00 56.02 O
TER
Atoms:
OP1: (-4.666,-30.421,23.290)
OP2: (-6.463,-30.138,21.480)
C3': (-4.090,-25.642,22.118)
C1': (-2.455,-26.004,23.783)
C5': (-5.556,-27.538,22.905)
O4': (-3.579,-26.806,24.080)
C8: (-1.463,-28.216,23.079)
O2': (-3.287,-23.773,23.452)
C6: (1.886,-27.564,22.210)
C5: (0.534,-27.669,22.588)
C4: (-0.096,-26.508,22.987)
P: (-5.086,-29.902,21.975)
C4': (-4.709,-26.355,23.299)
C2': (-2.903,-24.952,22.772)
C2: (1.723,-25.308,22.670)
N1: (2.459,-26.348,22.266)
N3: (0.445,-25.283,23.049)
N6: (2.619,-28.602,21.804)
N7: (-0.338,-28.742,22.648)
N9: (-1.387,-26.872,23.302)
O5': (-4.854,-28.324,21.968)
O3': (-5.018,-24.715,21.624)
OP2: (-6.463,-30.138,21.480)
C3': (-4.090,-25.642,22.118)
C1': (-2.455,-26.004,23.783)
C5': (-5.556,-27.538,22.905)
O4': (-3.579,-26.806,24.080)
C8: (-1.463,-28.216,23.079)
O2': (-3.287,-23.773,23.452)
C6: (1.886,-27.564,22.210)
C5: (0.534,-27.669,22.588)
C4: (-0.096,-26.508,22.987)
P: (-5.086,-29.902,21.975)
C4': (-4.709,-26.355,23.299)
C2': (-2.903,-24.952,22.772)
C2: (1.723,-25.308,22.670)
N1: (2.459,-26.348,22.266)
N3: (0.445,-25.283,23.049)
N6: (2.619,-28.602,21.804)
N7: (-0.338,-28.742,22.648)
N9: (-1.387,-26.872,23.302)
O5': (-4.854,-28.324,21.968)
O3': (-5.018,-24.715,21.624)
OP1: (1.802,-21.115,26.499)
OP2: (3.388,-21.547,28.466)
C3': (0.810,-25.684,28.704)
C1': (0.081,-27.086,27.040)
C5': (0.487,-23.683,27.135)
O4': (-0.580,-25.861,26.807)
C8: (2.072,-25.866,26.109)
O2': (-0.984,-27.270,29.173)
C6: (4.125,-28.273,24.586)
C5: (3.201,-27.432,25.233)
C4: (2.078,-28.028,25.777)
P: (2.577,-22.060,27.340)
C4': (-0.136,-24.898,27.804)
C2': (0.266,-27.097,28.540)
C2: (2.713,-30.031,25.113)
N1: (3.844,-29.593,24.544)
N3: (1.768,-29.336,25.751)
N6: (5.251,-27.824,24.020)
N7: (3.188,-26.068,25.453)
N9: (1.352,-27.003,26.339)
O5': (1.596,-23.203,27.907)
O3': (0.712,-25.225,30.042)
OP2: (3.388,-21.547,28.466)
C3': (0.810,-25.684,28.704)
C1': (0.081,-27.086,27.040)
C5': (0.487,-23.683,27.135)
O4': (-0.580,-25.861,26.807)
C8: (2.072,-25.866,26.109)
O2': (-0.984,-27.270,29.173)
C6: (4.125,-28.273,24.586)
C5: (3.201,-27.432,25.233)
C4: (2.078,-28.028,25.777)
P: (2.577,-22.060,27.340)
C4': (-0.136,-24.898,27.804)
C2': (0.266,-27.097,28.540)
C2: (2.713,-30.031,25.113)
N1: (3.844,-29.593,24.544)
N3: (1.768,-29.336,25.751)
N6: (5.251,-27.824,24.020)
N7: (3.188,-26.068,25.453)
N9: (1.352,-27.003,26.339)
O5': (1.596,-23.203,27.907)
O3': (0.712,-25.225,30.042)
Image (generated by PyMOL):