Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0305:0325
Extra
PDB:
ATOM 1 O3' A A 304 9.878 148.574 43.417 1.00 47.78 O
ATOM 2 P A A 305 8.617 147.942 42.648 1.00 46.68 P
ATOM 3 OP1 A A 305 8.702 148.296 41.212 1.00 46.00 O
ATOM 4 OP2 A A 305 7.391 148.276 43.421 1.00 47.44 O
ATOM 5 O5' A A 305 8.855 146.377 42.723 1.00 45.08 O
ATOM 6 C5' A A 305 8.450 145.539 41.644 1.00 46.10 C
ATOM 7 C4' A A 305 9.111 144.201 41.760 1.00 46.47 C
ATOM 8 O4' A A 305 9.006 143.756 43.138 1.00 47.03 O
ATOM 9 C3' A A 305 8.482 143.104 40.915 1.00 46.68 C
ATOM 10 O3' A A 305 9.502 142.185 40.567 1.00 49.23 O
ATOM 11 C2' A A 305 7.529 142.449 41.910 1.00 46.19 C
ATOM 12 O2' A A 305 7.168 141.125 41.572 1.00 45.97 O
ATOM 13 C1' A A 305 8.390 142.492 43.169 1.00 46.07 C
ATOM 14 N9 A A 305 7.713 142.344 44.451 1.00 45.58 N
ATOM 15 C8 A A 305 6.621 143.014 44.929 1.00 45.80 C
ATOM 16 N7 A A 305 6.261 142.645 46.133 1.00 46.27 N
ATOM 17 C5 A A 305 7.179 141.661 46.469 1.00 45.48 C
ATOM 18 C6 A A 305 7.330 140.863 47.611 1.00 43.81 C
ATOM 19 N6 A A 305 6.527 140.937 48.671 1.00 43.17 N
ATOM 20 N1 A A 305 8.343 139.972 47.626 1.00 42.73 N
ATOM 21 C2 A A 305 9.147 139.901 46.560 1.00 44.14 C
ATOM 22 N3 A A 305 9.107 140.595 45.427 1.00 45.45 N
ATOM 23 C4 A A 305 8.083 141.468 45.444 1.00 46.17 C
ATOM 24 P U A 306 9.804 141.879 39.031 1.00 52.00 P
ATOM 25 OP1 U A 306 10.490 143.069 38.489 1.00 52.69 O
ATOM 26 OP2 U A 306 8.538 141.410 38.413 1.00 54.99 O
ATOM 27 O5' U A 306 10.836 140.666 39.076 1.00 57.10 O
TER
ATOM 1 O3' G B 324 16.375 145.288 46.858 1.00 43.27 O
ATOM 2 P A B 325 17.239 144.054 47.414 1.00 42.80 P
ATOM 3 OP1 A B 325 17.637 144.421 48.785 1.00 44.84 O
ATOM 4 OP2 A B 325 18.283 143.662 46.427 1.00 42.00 O
ATOM 5 O5' A B 325 16.185 142.875 47.531 1.00 44.09 O
ATOM 6 C5' A B 325 15.969 141.959 46.450 1.00 44.89 C
ATOM 7 C4' A B 325 15.608 140.614 47.009 1.00 45.46 C
ATOM 8 O4' A B 325 14.599 140.788 48.039 1.00 45.18 O
ATOM 9 C3' A B 325 15.045 139.595 46.033 1.00 46.32 C
ATOM 10 O3' A B 325 15.437 138.324 46.524 1.00 48.52 O
ATOM 11 C2' A B 325 13.539 139.771 46.224 1.00 46.02 C
ATOM 12 O2' A B 325 12.771 138.635 45.886 1.00 48.92 O
ATOM 13 C1' A B 325 13.469 140.006 47.729 1.00 44.36 C
ATOM 14 N9 A B 325 12.284 140.710 48.206 1.00 43.76 N
ATOM 15 C8 A B 325 11.487 140.358 49.265 1.00 43.59 C
ATOM 16 N7 A B 325 10.499 141.187 49.482 1.00 42.93 N
ATOM 17 C5 A B 325 10.648 142.148 48.493 1.00 42.98 C
ATOM 18 C6 A B 325 9.914 143.298 48.177 1.00 42.55 C
ATOM 19 N6 A B 325 8.837 143.703 48.853 1.00 42.36 N
ATOM 20 N1 A B 325 10.331 144.035 47.130 1.00 44.65 N
ATOM 21 C2 A B 325 11.415 143.637 46.455 1.00 44.43 C
ATOM 22 N3 A B 325 12.187 142.578 46.655 1.00 43.24 N
ATOM 23 C4 A B 325 11.744 141.866 47.700 1.00 43.52 C
ATOM 24 P C B 326 16.625 137.516 45.819 1.00 50.69 P
ATOM 25 OP1 C B 326 17.390 136.836 46.896 1.00 51.38 O
ATOM 26 OP2 C B 326 17.340 138.399 44.871 1.00 52.58 O
ATOM 27 O5' C B 326 15.848 136.418 44.971 1.00 52.29 O
TER
ATOM 2 P A A 305 8.617 147.942 42.648 1.00 46.68 P
ATOM 3 OP1 A A 305 8.702 148.296 41.212 1.00 46.00 O
ATOM 4 OP2 A A 305 7.391 148.276 43.421 1.00 47.44 O
ATOM 5 O5' A A 305 8.855 146.377 42.723 1.00 45.08 O
ATOM 6 C5' A A 305 8.450 145.539 41.644 1.00 46.10 C
ATOM 7 C4' A A 305 9.111 144.201 41.760 1.00 46.47 C
ATOM 8 O4' A A 305 9.006 143.756 43.138 1.00 47.03 O
ATOM 9 C3' A A 305 8.482 143.104 40.915 1.00 46.68 C
ATOM 10 O3' A A 305 9.502 142.185 40.567 1.00 49.23 O
ATOM 11 C2' A A 305 7.529 142.449 41.910 1.00 46.19 C
ATOM 12 O2' A A 305 7.168 141.125 41.572 1.00 45.97 O
ATOM 13 C1' A A 305 8.390 142.492 43.169 1.00 46.07 C
ATOM 14 N9 A A 305 7.713 142.344 44.451 1.00 45.58 N
ATOM 15 C8 A A 305 6.621 143.014 44.929 1.00 45.80 C
ATOM 16 N7 A A 305 6.261 142.645 46.133 1.00 46.27 N
ATOM 17 C5 A A 305 7.179 141.661 46.469 1.00 45.48 C
ATOM 18 C6 A A 305 7.330 140.863 47.611 1.00 43.81 C
ATOM 19 N6 A A 305 6.527 140.937 48.671 1.00 43.17 N
ATOM 20 N1 A A 305 8.343 139.972 47.626 1.00 42.73 N
ATOM 21 C2 A A 305 9.147 139.901 46.560 1.00 44.14 C
ATOM 22 N3 A A 305 9.107 140.595 45.427 1.00 45.45 N
ATOM 23 C4 A A 305 8.083 141.468 45.444 1.00 46.17 C
ATOM 24 P U A 306 9.804 141.879 39.031 1.00 52.00 P
ATOM 25 OP1 U A 306 10.490 143.069 38.489 1.00 52.69 O
ATOM 26 OP2 U A 306 8.538 141.410 38.413 1.00 54.99 O
ATOM 27 O5' U A 306 10.836 140.666 39.076 1.00 57.10 O
TER
ATOM 1 O3' G B 324 16.375 145.288 46.858 1.00 43.27 O
ATOM 2 P A B 325 17.239 144.054 47.414 1.00 42.80 P
ATOM 3 OP1 A B 325 17.637 144.421 48.785 1.00 44.84 O
ATOM 4 OP2 A B 325 18.283 143.662 46.427 1.00 42.00 O
ATOM 5 O5' A B 325 16.185 142.875 47.531 1.00 44.09 O
ATOM 6 C5' A B 325 15.969 141.959 46.450 1.00 44.89 C
ATOM 7 C4' A B 325 15.608 140.614 47.009 1.00 45.46 C
ATOM 8 O4' A B 325 14.599 140.788 48.039 1.00 45.18 O
ATOM 9 C3' A B 325 15.045 139.595 46.033 1.00 46.32 C
ATOM 10 O3' A B 325 15.437 138.324 46.524 1.00 48.52 O
ATOM 11 C2' A B 325 13.539 139.771 46.224 1.00 46.02 C
ATOM 12 O2' A B 325 12.771 138.635 45.886 1.00 48.92 O
ATOM 13 C1' A B 325 13.469 140.006 47.729 1.00 44.36 C
ATOM 14 N9 A B 325 12.284 140.710 48.206 1.00 43.76 N
ATOM 15 C8 A B 325 11.487 140.358 49.265 1.00 43.59 C
ATOM 16 N7 A B 325 10.499 141.187 49.482 1.00 42.93 N
ATOM 17 C5 A B 325 10.648 142.148 48.493 1.00 42.98 C
ATOM 18 C6 A B 325 9.914 143.298 48.177 1.00 42.55 C
ATOM 19 N6 A B 325 8.837 143.703 48.853 1.00 42.36 N
ATOM 20 N1 A B 325 10.331 144.035 47.130 1.00 44.65 N
ATOM 21 C2 A B 325 11.415 143.637 46.455 1.00 44.43 C
ATOM 22 N3 A B 325 12.187 142.578 46.655 1.00 43.24 N
ATOM 23 C4 A B 325 11.744 141.866 47.700 1.00 43.52 C
ATOM 24 P C B 326 16.625 137.516 45.819 1.00 50.69 P
ATOM 25 OP1 C B 326 17.390 136.836 46.896 1.00 51.38 O
ATOM 26 OP2 C B 326 17.340 138.399 44.871 1.00 52.58 O
ATOM 27 O5' C B 326 15.848 136.418 44.971 1.00 52.29 O
TER
Atoms:
OP1: (8.702,148.296,41.212)
OP2: (7.391,148.276,43.421)
C3': (8.482,143.104,40.915)
C1': (8.390,142.492,43.169)
C5': (8.450,145.539,41.644)
O4': (9.006,143.756,43.138)
C8: (6.621,143.014,44.929)
O2': (7.168,141.125,41.572)
C6: (7.330,140.863,47.611)
C5: (7.179,141.661,46.469)
C4: (8.083,141.468,45.444)
P: (8.617,147.942,42.648)
C4': (9.111,144.201,41.760)
C2': (7.529,142.449,41.910)
C2: (9.147,139.901,46.560)
N1: (8.343,139.972,47.626)
N3: (9.107,140.595,45.427)
N6: (6.527,140.937,48.671)
N7: (6.261,142.645,46.133)
N9: (7.713,142.344,44.451)
O5': (8.855,146.377,42.723)
O3': (9.502,142.185,40.567)
OP2: (7.391,148.276,43.421)
C3': (8.482,143.104,40.915)
C1': (8.390,142.492,43.169)
C5': (8.450,145.539,41.644)
O4': (9.006,143.756,43.138)
C8: (6.621,143.014,44.929)
O2': (7.168,141.125,41.572)
C6: (7.330,140.863,47.611)
C5: (7.179,141.661,46.469)
C4: (8.083,141.468,45.444)
P: (8.617,147.942,42.648)
C4': (9.111,144.201,41.760)
C2': (7.529,142.449,41.910)
C2: (9.147,139.901,46.560)
N1: (8.343,139.972,47.626)
N3: (9.107,140.595,45.427)
N6: (6.527,140.937,48.671)
N7: (6.261,142.645,46.133)
N9: (7.713,142.344,44.451)
O5': (8.855,146.377,42.723)
O3': (9.502,142.185,40.567)
OP1: (17.637,144.421,48.785)
OP2: (18.283,143.662,46.427)
C3': (15.045,139.595,46.033)
C1': (13.469,140.006,47.729)
C5': (15.969,141.959,46.450)
O4': (14.599,140.788,48.039)
C8: (11.487,140.358,49.265)
O2': (12.771,138.635,45.886)
C6: (9.914,143.298,48.177)
C5: (10.648,142.148,48.493)
C4: (11.744,141.866,47.700)
P: (17.239,144.054,47.414)
C4': (15.608,140.614,47.009)
C2': (13.539,139.771,46.224)
C2: (11.415,143.637,46.455)
N1: (10.331,144.035,47.130)
N3: (12.187,142.578,46.655)
N6: (8.837,143.703,48.853)
N7: (10.499,141.187,49.482)
N9: (12.284,140.710,48.206)
O5': (16.185,142.875,47.531)
O3': (15.437,138.324,46.524)
OP2: (18.283,143.662,46.427)
C3': (15.045,139.595,46.033)
C1': (13.469,140.006,47.729)
C5': (15.969,141.959,46.450)
O4': (14.599,140.788,48.039)
C8: (11.487,140.358,49.265)
O2': (12.771,138.635,45.886)
C6: (9.914,143.298,48.177)
C5: (10.648,142.148,48.493)
C4: (11.744,141.866,47.700)
P: (17.239,144.054,47.414)
C4': (15.608,140.614,47.009)
C2': (13.539,139.771,46.224)
C2: (11.415,143.637,46.455)
N1: (10.331,144.035,47.130)
N3: (12.187,142.578,46.655)
N6: (8.837,143.703,48.853)
N7: (10.499,141.187,49.482)
N9: (12.284,140.710,48.206)
O5': (16.185,142.875,47.531)
O3': (15.437,138.324,46.524)
Image (generated by PyMOL):