ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01:0520

Extra

PDB:
ATOM 1 P A A 1 20.616 148.665 100.987 1.00 74.39 P
ATOM 2 OP1 A A 1 20.253 148.885 99.561 1.00 74.96 O
ATOM 3 OP2 A A 1 21.080 147.322 101.423 1.00 72.63 O
ATOM 4 O5' A A 1 21.722 149.742 101.379 1.00 69.50 O
ATOM 5 C5' A A 1 23.089 149.551 101.024 1.00 62.10 C
ATOM 6 C4' A A 1 23.987 150.293 101.977 1.00 57.07 C
ATOM 7 O4' A A 1 23.641 149.974 103.349 1.00 55.91 O
ATOM 8 C3' A A 1 25.441 149.902 101.832 1.00 54.87 C
ATOM 9 O3' A A 1 26.040 150.669 100.804 1.00 51.80 O
ATOM 10 C2' A A 1 25.992 150.149 103.231 1.00 55.06 C
ATOM 11 O2' A A 1 26.240 151.510 103.507 1.00 55.30 O
ATOM 12 C1' A A 1 24.814 149.688 104.091 1.00 54.54 C
ATOM 13 N9 A A 1 24.807 148.251 104.378 1.00 54.86 N
ATOM 14 C8 A A 1 23.718 147.407 104.352 1.00 55.25 C
ATOM 15 N7 A A 1 24.003 146.163 104.645 1.00 54.02 N
ATOM 16 C5 A A 1 25.371 146.184 104.882 1.00 52.94 C
ATOM 17 C6 A A 1 26.277 145.179 105.237 1.00 51.83 C
ATOM 18 N6 A A 1 25.929 143.905 105.421 1.00 53.22 N
ATOM 19 N1 A A 1 27.569 145.526 105.397 1.00 50.88 N
ATOM 20 C2 A A 1 27.916 146.801 105.208 1.00 51.26 C
ATOM 21 N3 A A 1 27.158 147.840 104.873 1.00 52.28 N
ATOM 22 C4 A A 1 25.879 147.461 104.723 1.00 53.25 C
ATOM 23 P U A 2 26.226 150.030 99.345 1.00 51.97 P
ATOM 24 OP1 U A 2 26.685 151.129 98.457 1.00 52.03 O
ATOM 25 OP2 U A 2 25.018 149.257 98.975 1.00 52.20 O
ATOM 26 O5' U A 2 27.425 149.002 99.542 1.00 52.13 O
TER

ATOM 1 O3' G B 519 21.038 139.337 107.067 1.00 42.87 O
ATOM 2 P A B 520 20.777 140.451 108.202 1.00 41.74 P
ATOM 3 OP1 A B 520 20.443 139.741 109.464 1.00 39.76 O
ATOM 4 OP2 A B 520 19.819 141.432 107.642 1.00 42.19 O
ATOM 5 O5' A B 520 22.197 141.156 108.377 1.00 39.39 O
ATOM 6 C5' A B 520 23.403 140.364 108.393 1.00 37.21 C
ATOM 7 C4' A B 520 24.573 141.177 108.888 1.00 35.30 C
ATOM 8 O4' A B 520 24.840 142.257 107.971 1.00 35.51 O
ATOM 9 C3' A B 520 24.396 141.841 110.238 1.00 34.94 C
ATOM 10 O3' A B 520 24.779 140.926 111.249 1.00 35.60 O
ATOM 11 C2' A B 520 25.385 142.996 110.169 1.00 35.39 C
ATOM 12 O2' A B 520 26.698 142.573 110.443 1.00 35.53 O
ATOM 13 C1' A B 520 25.316 143.375 108.690 1.00 36.04 C
ATOM 14 N9 A B 520 24.466 144.511 108.356 1.00 39.10 N
ATOM 15 C8 A B 520 23.137 144.499 108.010 1.00 40.46 C
ATOM 16 N7 A B 520 22.672 145.673 107.665 1.00 41.68 N
ATOM 17 C5 A B 520 23.762 146.518 107.811 1.00 41.72 C
ATOM 18 C6 A B 520 23.931 147.887 107.571 1.00 41.78 C
ATOM 19 N6 A B 520 22.970 148.674 107.080 1.00 43.04 N
ATOM 20 N1 A B 520 25.140 148.426 107.837 1.00 41.74 N
ATOM 21 C2 A B 520 26.112 147.628 108.292 1.00 41.97 C
ATOM 22 N3 A B 520 26.084 146.321 108.533 1.00 42.72 N
ATOM 23 C4 A B 520 24.865 145.819 108.268 1.00 41.80 C
ATOM 24 P U B 521 23.694 140.383 112.289 1.00 36.91 P
ATOM 25 OP1 U B 521 22.479 140.004 111.541 1.00 37.60 O
ATOM 26 OP2 U B 521 23.605 141.395 113.368 1.00 38.29 O
ATOM 27 O5' U B 521 24.359 139.062 112.876 1.00 35.04 O
TER

Atoms:
OP1: (20.253,148.885,99.561)
OP2: (21.080,147.322,101.423)
C3': (25.441,149.902,101.832)
C1': (24.814,149.688,104.091)
C5': (23.089,149.551,101.024)
O4': (23.641,149.974,103.349)
C8: (23.718,147.407,104.352)
O2': (26.240,151.510,103.507)
C6: (26.277,145.179,105.237)
C5: (25.371,146.184,104.882)
C4: (25.879,147.461,104.723)
P: (20.616,148.665,100.987)
C4': (23.987,150.293,101.977)
C2': (25.992,150.149,103.231)
C2: (27.916,146.801,105.208)
N1: (27.569,145.526,105.397)
N3: (27.158,147.840,104.873)
N6: (25.929,143.905,105.421)
N7: (24.003,146.163,104.645)
N9: (24.807,148.251,104.378)
O5': (21.722,149.742,101.379)
O3': (26.040,150.669,100.804)
OP1: (20.443,139.741,109.464)
OP2: (19.819,141.432,107.642)
C3': (24.396,141.841,110.238)
C1': (25.316,143.375,108.690)
C5': (23.403,140.364,108.393)
O4': (24.840,142.257,107.971)
C8: (23.137,144.499,108.010)
O2': (26.698,142.573,110.443)
C6: (23.931,147.887,107.571)
C5: (23.762,146.518,107.811)
C4: (24.865,145.819,108.268)
P: (20.777,140.451,108.202)
C4': (24.573,141.177,108.888)
C2': (25.385,142.996,110.169)
C2: (26.112,147.628,108.292)
N1: (25.140,148.426,107.837)
N3: (26.084,146.321,108.533)
N6: (22.970,148.674,107.080)
N7: (22.672,145.673,107.665)
N9: (24.466,144.511,108.356)
O5': (22.197,141.156,108.377)
O3': (24.779,140.926,111.249)
Image (generated by PyMOL):
PyMOL image
show in jmol