ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A139:A430

Extra

PDB:
ATOM 1 O3' G A 138 61.539 132.777 37.367 1.00 42.27 O
ATOM 2 P A A 139 61.689 132.565 38.962 1.00 44.60 P
ATOM 3 OP1 A A 139 60.990 133.728 39.587 1.00 41.74 O
ATOM 4 OP2 A A 139 63.099 132.261 39.331 1.00 43.27 O
ATOM 5 O5' A A 139 60.830 131.256 39.257 1.00 44.05 O
ATOM 6 C5' A A 139 59.913 131.193 40.378 1.00 43.27 C
ATOM 7 C4' A A 139 58.934 130.066 40.176 1.00 40.78 C
ATOM 8 O4' A A 139 58.128 130.337 39.007 1.00 41.10 O
ATOM 9 C3' A A 139 59.611 128.746 39.882 1.00 41.65 C
ATOM 10 O3' A A 139 59.984 128.127 41.108 1.00 41.21 O
ATOM 11 C2' A A 139 58.573 128.000 39.045 1.00 41.96 C
ATOM 12 O2' A A 139 57.526 127.414 39.791 1.00 44.12 O
ATOM 13 C1' A A 139 57.952 129.148 38.250 1.00 41.88 C
ATOM 14 N9 A A 139 58.490 129.378 36.904 1.00 41.45 N
ATOM 15 C8 A A 139 59.367 130.363 36.537 1.00 41.29 C
ATOM 16 N7 A A 139 59.635 130.384 35.259 1.00 41.08 N
ATOM 17 C5 A A 139 58.902 129.330 34.748 1.00 40.84 C
ATOM 18 C6 A A 139 58.757 128.831 33.446 1.00 41.31 C
ATOM 19 N6 A A 139 59.377 129.347 32.385 1.00 41.15 N
ATOM 20 N1 A A 139 57.941 127.770 33.267 1.00 42.55 N
ATOM 21 C2 A A 139 57.320 127.258 34.334 1.00 41.69 C
ATOM 22 N3 A A 139 57.378 127.640 35.605 1.00 41.87 N
ATOM 23 C4 A A 139 58.197 128.693 35.749 1.00 40.95 C
ATOM 24 P A A 140 61.537 127.839 41.420 1.00 41.65 P
ATOM 25 OP1 A A 140 61.642 127.845 42.905 1.00 42.56 O
ATOM 26 OP2 A A 140 62.400 128.745 40.616 1.00 42.35 O
ATOM 27 O5' A A 140 61.764 126.357 40.881 1.00 38.53 O
TER

ATOM 1 O3' A B 429 53.714 127.896 37.041 1.00 43.06 O
ATOM 2 P A B 430 53.104 128.964 38.061 1.00 43.15 P
ATOM 3 OP1 A B 430 53.810 128.770 39.355 1.00 44.14 O
ATOM 4 OP2 A B 430 51.632 128.865 38.022 1.00 43.55 O
ATOM 5 O5' A B 430 53.505 130.360 37.407 1.00 42.82 O
ATOM 6 C5' A B 430 54.647 131.107 37.874 1.00 43.02 C
ATOM 7 C4' A B 430 55.284 131.839 36.725 1.00 43.95 C
ATOM 8 O4' A B 430 55.976 130.889 35.876 1.00 44.92 O
ATOM 9 C3' A B 430 54.296 132.513 35.795 1.00 45.06 C
ATOM 10 O3' A B 430 53.856 133.772 36.294 1.00 46.78 O
ATOM 11 C2' A B 430 55.072 132.592 34.488 1.00 45.11 C
ATOM 12 O2' A B 430 56.001 133.652 34.472 1.00 45.07 O
ATOM 13 C1' A B 430 55.844 131.271 34.517 1.00 45.97 C
ATOM 14 N9 A B 430 55.215 130.168 33.786 1.00 47.70 N
ATOM 15 C8 A B 430 54.714 129.000 34.309 1.00 48.21 C
ATOM 16 N7 A B 430 54.214 128.188 33.411 1.00 48.02 N
ATOM 17 C5 A B 430 54.391 128.866 32.214 1.00 47.93 C
ATOM 18 C6 A B 430 54.059 128.544 30.891 1.00 47.85 C
ATOM 19 N6 A B 430 53.453 127.412 30.536 1.00 48.67 N
ATOM 20 N1 A B 430 54.372 129.437 29.930 1.00 48.15 N
ATOM 21 C2 A B 430 54.974 130.575 30.287 1.00 49.15 C
ATOM 22 N3 A B 430 55.332 130.998 31.498 1.00 49.06 N
ATOM 23 C4 A B 430 55.009 130.086 32.429 1.00 47.98 C
ATOM 24 P C B 431 52.281 134.104 36.311 1.00 49.14 P
ATOM 25 OP1 C B 431 52.068 135.487 36.824 1.00 48.89 O
ATOM 26 OP2 C B 431 51.563 132.972 36.949 1.00 50.52 O
ATOM 27 O5' C B 431 51.897 134.080 34.767 1.00 48.39 O
TER

Atoms:
OP1: (60.990,133.728,39.587)
OP2: (63.099,132.261,39.331)
C3': (59.611,128.746,39.882)
C1': (57.952,129.148,38.250)
C5': (59.913,131.193,40.378)
O4': (58.128,130.337,39.007)
C8: (59.367,130.363,36.537)
O2': (57.526,127.414,39.791)
C6: (58.757,128.831,33.446)
C5: (58.902,129.330,34.748)
C4: (58.197,128.693,35.749)
P: (61.689,132.565,38.962)
C4': (58.934,130.066,40.176)
C2': (58.573,128.000,39.045)
C2: (57.320,127.258,34.334)
N1: (57.941,127.770,33.267)
N3: (57.378,127.640,35.605)
N6: (59.377,129.347,32.385)
N7: (59.635,130.384,35.259)
N9: (58.490,129.378,36.904)
O5': (60.830,131.256,39.257)
O3': (59.984,128.127,41.108)
OP1: (53.810,128.770,39.355)
OP2: (51.632,128.865,38.022)
C3': (54.296,132.513,35.795)
C1': (55.844,131.271,34.517)
C5': (54.647,131.107,37.874)
O4': (55.976,130.889,35.876)
C8: (54.714,129.000,34.309)
O2': (56.001,133.652,34.472)
C6: (54.059,128.544,30.891)
C5: (54.391,128.866,32.214)
C4: (55.009,130.086,32.429)
P: (53.104,128.964,38.061)
C4': (55.284,131.839,36.725)
C2': (55.072,132.592,34.488)
C2: (54.974,130.575,30.287)
N1: (54.372,129.437,29.930)
N3: (55.332,130.998,31.498)
N6: (53.453,127.412,30.536)
N7: (54.214,128.188,33.411)
N9: (55.215,130.168,33.786)
O5': (53.505,130.360,37.407)
O3': (53.856,133.772,36.294)
Image (generated by PyMOL):
PyMOL image
show in jmol