Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:038:0103
Extra
PDB:
ATOM 1 O3' G A 37 69.474 147.034 29.097 1.00 57.67 O
ATOM 2 P A A 38 68.075 147.607 29.661 1.00 58.11 P
ATOM 3 OP1 A A 38 67.432 148.380 28.576 1.00 58.08 O
ATOM 4 OP2 A A 38 68.306 148.261 30.968 1.00 56.56 O
ATOM 5 O5' A A 38 67.198 146.296 29.892 1.00 58.44 O
ATOM 6 C5' A A 38 66.572 145.618 28.780 1.00 57.96 C
ATOM 7 C4' A A 38 66.427 144.143 29.073 1.00 56.28 C
ATOM 8 O4' A A 38 67.737 143.531 29.143 1.00 57.97 O
ATOM 9 C3' A A 38 65.784 143.825 30.405 1.00 55.30 C
ATOM 10 O3' A A 38 64.376 143.849 30.299 1.00 52.11 O
ATOM 11 C2' A A 38 66.339 142.448 30.735 1.00 56.19 C
ATOM 12 O2' A A 38 65.673 141.412 30.054 1.00 56.89 O
ATOM 13 C1' A A 38 67.754 142.552 30.167 1.00 56.83 C
ATOM 14 N9 A A 38 68.790 142.922 31.127 1.00 56.76 N
ATOM 15 C8 A A 38 69.437 144.126 31.230 1.00 56.65 C
ATOM 16 N7 A A 38 70.382 144.139 32.135 1.00 58.03 N
ATOM 17 C5 A A 38 70.346 142.862 32.676 1.00 56.75 C
ATOM 18 C6 A A 38 71.113 142.232 33.669 1.00 56.11 C
ATOM 19 N6 A A 38 72.132 142.819 34.302 1.00 55.51 N
ATOM 20 N1 A A 38 70.805 140.959 33.986 1.00 56.13 N
ATOM 21 C2 A A 38 69.805 140.364 33.340 1.00 56.68 C
ATOM 22 N3 A A 38 69.023 140.841 32.379 1.00 58.30 N
ATOM 23 C4 A A 38 69.351 142.111 32.086 1.00 57.44 C
ATOM 24 P A A 39 63.521 144.569 31.442 1.00 53.55 P
ATOM 25 OP1 A A 39 62.106 144.668 30.996 1.00 52.95 O
ATOM 26 OP2 A A 39 64.256 145.805 31.815 1.00 54.91 O
ATOM 27 O5' A A 39 63.625 143.557 32.665 1.00 52.22 O
TER
ATOM 1 O3' G B 102 74.861 145.441 38.461 1.00 44.72 O
ATOM 2 P A B 103 76.286 144.918 37.973 1.00 46.07 P
ATOM 3 OP1 A B 103 76.786 144.051 39.066 1.00 44.26 O
ATOM 4 OP2 A B 103 77.068 146.101 37.558 1.00 45.42 O
ATOM 5 O5' A B 103 75.977 144.010 36.697 1.00 45.97 O
ATOM 6 C5' A B 103 75.605 142.625 36.861 1.00 47.98 C
ATOM 7 C4' A B 103 76.172 141.762 35.749 1.00 47.68 C
ATOM 8 O4' A B 103 75.291 141.719 34.598 1.00 49.54 O
ATOM 9 C3' A B 103 77.497 142.178 35.157 1.00 46.46 C
ATOM 10 O3' A B 103 78.574 141.852 36.016 1.00 45.67 O
ATOM 11 C2' A B 103 77.530 141.381 33.856 1.00 47.55 C
ATOM 12 O2' A B 103 77.962 140.053 34.055 1.00 45.37 O
ATOM 13 C1' A B 103 76.051 141.392 33.442 1.00 49.70 C
ATOM 14 N9 A B 103 75.675 142.315 32.359 1.00 52.77 N
ATOM 15 C8 A B 103 76.282 143.492 31.994 1.00 53.71 C
ATOM 16 N7 A B 103 75.679 144.114 31.008 1.00 54.21 N
ATOM 17 C5 A B 103 74.611 143.289 30.694 1.00 52.77 C
ATOM 18 C6 A B 103 73.587 143.391 29.739 1.00 53.13 C
ATOM 19 N6 A B 103 73.454 144.411 28.894 1.00 53.50 N
ATOM 20 N1 A B 103 72.685 142.395 29.681 1.00 53.51 N
ATOM 21 C2 A B 103 72.807 141.377 30.526 1.00 53.17 C
ATOM 22 N3 A B 103 73.716 141.167 31.469 1.00 53.82 N
ATOM 23 C4 A B 103 74.602 142.172 31.506 1.00 52.61 C
ATOM 24 P A B 104 80.054 142.354 35.652 1.00 46.64 P
ATOM 25 OP1 A B 104 80.668 141.390 34.693 1.00 44.70 O
ATOM 26 OP2 A B 104 80.760 142.680 36.912 1.00 46.31 O
ATOM 27 O5' A B 104 79.793 143.712 34.874 1.00 45.95 O
TER
ATOM 2 P A A 38 68.075 147.607 29.661 1.00 58.11 P
ATOM 3 OP1 A A 38 67.432 148.380 28.576 1.00 58.08 O
ATOM 4 OP2 A A 38 68.306 148.261 30.968 1.00 56.56 O
ATOM 5 O5' A A 38 67.198 146.296 29.892 1.00 58.44 O
ATOM 6 C5' A A 38 66.572 145.618 28.780 1.00 57.96 C
ATOM 7 C4' A A 38 66.427 144.143 29.073 1.00 56.28 C
ATOM 8 O4' A A 38 67.737 143.531 29.143 1.00 57.97 O
ATOM 9 C3' A A 38 65.784 143.825 30.405 1.00 55.30 C
ATOM 10 O3' A A 38 64.376 143.849 30.299 1.00 52.11 O
ATOM 11 C2' A A 38 66.339 142.448 30.735 1.00 56.19 C
ATOM 12 O2' A A 38 65.673 141.412 30.054 1.00 56.89 O
ATOM 13 C1' A A 38 67.754 142.552 30.167 1.00 56.83 C
ATOM 14 N9 A A 38 68.790 142.922 31.127 1.00 56.76 N
ATOM 15 C8 A A 38 69.437 144.126 31.230 1.00 56.65 C
ATOM 16 N7 A A 38 70.382 144.139 32.135 1.00 58.03 N
ATOM 17 C5 A A 38 70.346 142.862 32.676 1.00 56.75 C
ATOM 18 C6 A A 38 71.113 142.232 33.669 1.00 56.11 C
ATOM 19 N6 A A 38 72.132 142.819 34.302 1.00 55.51 N
ATOM 20 N1 A A 38 70.805 140.959 33.986 1.00 56.13 N
ATOM 21 C2 A A 38 69.805 140.364 33.340 1.00 56.68 C
ATOM 22 N3 A A 38 69.023 140.841 32.379 1.00 58.30 N
ATOM 23 C4 A A 38 69.351 142.111 32.086 1.00 57.44 C
ATOM 24 P A A 39 63.521 144.569 31.442 1.00 53.55 P
ATOM 25 OP1 A A 39 62.106 144.668 30.996 1.00 52.95 O
ATOM 26 OP2 A A 39 64.256 145.805 31.815 1.00 54.91 O
ATOM 27 O5' A A 39 63.625 143.557 32.665 1.00 52.22 O
TER
ATOM 1 O3' G B 102 74.861 145.441 38.461 1.00 44.72 O
ATOM 2 P A B 103 76.286 144.918 37.973 1.00 46.07 P
ATOM 3 OP1 A B 103 76.786 144.051 39.066 1.00 44.26 O
ATOM 4 OP2 A B 103 77.068 146.101 37.558 1.00 45.42 O
ATOM 5 O5' A B 103 75.977 144.010 36.697 1.00 45.97 O
ATOM 6 C5' A B 103 75.605 142.625 36.861 1.00 47.98 C
ATOM 7 C4' A B 103 76.172 141.762 35.749 1.00 47.68 C
ATOM 8 O4' A B 103 75.291 141.719 34.598 1.00 49.54 O
ATOM 9 C3' A B 103 77.497 142.178 35.157 1.00 46.46 C
ATOM 10 O3' A B 103 78.574 141.852 36.016 1.00 45.67 O
ATOM 11 C2' A B 103 77.530 141.381 33.856 1.00 47.55 C
ATOM 12 O2' A B 103 77.962 140.053 34.055 1.00 45.37 O
ATOM 13 C1' A B 103 76.051 141.392 33.442 1.00 49.70 C
ATOM 14 N9 A B 103 75.675 142.315 32.359 1.00 52.77 N
ATOM 15 C8 A B 103 76.282 143.492 31.994 1.00 53.71 C
ATOM 16 N7 A B 103 75.679 144.114 31.008 1.00 54.21 N
ATOM 17 C5 A B 103 74.611 143.289 30.694 1.00 52.77 C
ATOM 18 C6 A B 103 73.587 143.391 29.739 1.00 53.13 C
ATOM 19 N6 A B 103 73.454 144.411 28.894 1.00 53.50 N
ATOM 20 N1 A B 103 72.685 142.395 29.681 1.00 53.51 N
ATOM 21 C2 A B 103 72.807 141.377 30.526 1.00 53.17 C
ATOM 22 N3 A B 103 73.716 141.167 31.469 1.00 53.82 N
ATOM 23 C4 A B 103 74.602 142.172 31.506 1.00 52.61 C
ATOM 24 P A B 104 80.054 142.354 35.652 1.00 46.64 P
ATOM 25 OP1 A B 104 80.668 141.390 34.693 1.00 44.70 O
ATOM 26 OP2 A B 104 80.760 142.680 36.912 1.00 46.31 O
ATOM 27 O5' A B 104 79.793 143.712 34.874 1.00 45.95 O
TER
Atoms:
OP1: (67.432,148.380,28.576)
OP2: (68.306,148.261,30.968)
C3': (65.784,143.825,30.405)
C1': (67.754,142.552,30.167)
C5': (66.572,145.618,28.780)
O4': (67.737,143.531,29.143)
C8: (69.437,144.126,31.230)
O2': (65.673,141.412,30.054)
C6: (71.113,142.232,33.669)
C5: (70.346,142.862,32.676)
C4: (69.351,142.111,32.086)
P: (68.075,147.607,29.661)
C4': (66.427,144.143,29.073)
C2': (66.339,142.448,30.735)
C2: (69.805,140.364,33.340)
N1: (70.805,140.959,33.986)
N3: (69.023,140.841,32.379)
N6: (72.132,142.819,34.302)
N7: (70.382,144.139,32.135)
N9: (68.790,142.922,31.127)
O5': (67.198,146.296,29.892)
O3': (64.376,143.849,30.299)
OP2: (68.306,148.261,30.968)
C3': (65.784,143.825,30.405)
C1': (67.754,142.552,30.167)
C5': (66.572,145.618,28.780)
O4': (67.737,143.531,29.143)
C8: (69.437,144.126,31.230)
O2': (65.673,141.412,30.054)
C6: (71.113,142.232,33.669)
C5: (70.346,142.862,32.676)
C4: (69.351,142.111,32.086)
P: (68.075,147.607,29.661)
C4': (66.427,144.143,29.073)
C2': (66.339,142.448,30.735)
C2: (69.805,140.364,33.340)
N1: (70.805,140.959,33.986)
N3: (69.023,140.841,32.379)
N6: (72.132,142.819,34.302)
N7: (70.382,144.139,32.135)
N9: (68.790,142.922,31.127)
O5': (67.198,146.296,29.892)
O3': (64.376,143.849,30.299)
OP1: (76.786,144.051,39.066)
OP2: (77.068,146.101,37.558)
C3': (77.497,142.178,35.157)
C1': (76.051,141.392,33.442)
C5': (75.605,142.625,36.861)
O4': (75.291,141.719,34.598)
C8: (76.282,143.492,31.994)
O2': (77.962,140.053,34.055)
C6: (73.587,143.391,29.739)
C5: (74.611,143.289,30.694)
C4: (74.602,142.172,31.506)
P: (76.286,144.918,37.973)
C4': (76.172,141.762,35.749)
C2': (77.530,141.381,33.856)
C2: (72.807,141.377,30.526)
N1: (72.685,142.395,29.681)
N3: (73.716,141.167,31.469)
N6: (73.454,144.411,28.894)
N7: (75.679,144.114,31.008)
N9: (75.675,142.315,32.359)
O5': (75.977,144.010,36.697)
O3': (78.574,141.852,36.016)
OP2: (77.068,146.101,37.558)
C3': (77.497,142.178,35.157)
C1': (76.051,141.392,33.442)
C5': (75.605,142.625,36.861)
O4': (75.291,141.719,34.598)
C8: (76.282,143.492,31.994)
O2': (77.962,140.053,34.055)
C6: (73.587,143.391,29.739)
C5: (74.611,143.289,30.694)
C4: (74.602,142.172,31.506)
P: (76.286,144.918,37.973)
C4': (76.172,141.762,35.749)
C2': (77.530,141.381,33.856)
C2: (72.807,141.377,30.526)
N1: (72.685,142.395,29.681)
N3: (73.716,141.167,31.469)
N6: (73.454,144.411,28.894)
N7: (75.679,144.114,31.008)
N9: (75.675,142.315,32.359)
O5': (75.977,144.010,36.697)
O3': (78.574,141.852,36.016)
Image (generated by PyMOL):