Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A12:A525
Extra
PDB:
ATOM 1 O3' U A 11 -36.647 109.497 218.886 1.00 47.60 O
ATOM 2 P A A 12 -35.823 110.583 218.001 1.00 1.83 P
ATOM 3 OP1 A A 12 -34.383 110.199 218.116 1.00 1.83 O
ATOM 4 OP2 A A 12 -36.244 111.936 218.455 1.00 1.83 O
ATOM 5 O5' A A 12 -36.294 110.364 216.483 1.00 1.83 O
ATOM 6 C5' A A 12 -35.367 109.867 215.513 1.00 1.83 C
ATOM 7 C4' A A 12 -35.346 110.651 214.202 1.00 1.83 C
ATOM 8 O4' A A 12 -36.644 110.606 213.570 1.00 1.83 O
ATOM 9 C3' A A 12 -34.924 112.110 214.269 1.00 1.83 C
ATOM 10 O3' A A 12 -34.015 112.391 213.192 1.00 1.83 O
ATOM 11 C2' A A 12 -36.233 112.878 214.051 1.00 1.83 C
ATOM 12 O2' A A 12 -36.077 114.113 213.372 1.00 1.83 O
ATOM 13 C1' A A 12 -37.090 111.898 213.237 1.00 1.83 C
ATOM 14 N9 A A 12 -38.508 111.929 213.576 1.00 1.61 N
ATOM 15 C8 A A 12 -38.902 111.707 214.854 1.00 1.61 C
ATOM 16 N7 A A 12 -40.183 111.685 215.055 1.00 1.61 N
ATOM 17 C5 A A 12 -40.679 111.882 213.807 1.00 1.61 C
ATOM 18 C6 A A 12 -42.007 111.955 213.402 1.00 1.61 C
ATOM 19 N6 A A 12 -43.020 111.838 214.256 1.00 1.61 N
ATOM 20 N1 A A 12 -42.240 112.132 212.090 1.00 1.61 N
ATOM 21 C2 A A 12 -41.159 112.233 211.305 1.00 1.61 C
ATOM 22 N3 A A 12 -39.856 112.189 211.602 1.00 1.61 N
ATOM 23 C4 A A 12 -39.668 112.009 212.885 1.00 1.61 C
ATOM 24 P A A 13 -32.523 111.735 213.170 1.00 1.14 P
ATOM 25 OP1 A A 13 -32.515 110.557 214.092 1.00 1.14 O
ATOM 26 OP2 A A 13 -31.556 112.835 213.415 1.00 1.14 O
ATOM 27 O5' A A 13 -32.378 111.218 211.686 1.00 1.14 O
TER
ATOM 1 O3' U B 524 -46.605 112.825 210.850 1.00 0.01 O
ATOM 2 P A B 525 -46.516 111.360 211.468 1.00 0.01 P
ATOM 3 OP1 A B 525 -47.843 110.746 211.328 1.00 0.01 O
ATOM 4 OP2 A B 525 -45.933 111.495 212.819 1.00 0.01 O
ATOM 5 O5' A B 525 -45.478 110.655 210.501 1.00 0.01 O
ATOM 6 C5' A B 525 -45.708 110.586 209.118 1.00 0.01 C
ATOM 7 C4' A B 525 -44.837 109.544 208.487 1.00 0.01 C
ATOM 8 O4' A B 525 -43.452 109.818 208.777 1.00 0.01 O
ATOM 9 C3' A B 525 -45.025 108.122 208.982 1.00 0.01 C
ATOM 10 O3' A B 525 -46.157 107.478 208.397 1.00 0.01 O
ATOM 11 C2' A B 525 -43.694 107.461 208.631 1.00 0.01 C
ATOM 12 O2' A B 525 -43.751 106.933 207.328 1.00 0.01 O
ATOM 13 C1' A B 525 -42.712 108.637 208.627 1.00 0.01 C
ATOM 14 N9 A B 525 -41.701 108.561 209.687 1.00 0.01 N
ATOM 15 C8 A B 525 -41.863 108.574 211.029 1.00 0.01 C
ATOM 16 N7 A B 525 -40.730 108.516 211.695 1.00 0.01 N
ATOM 17 C5 A B 525 -39.741 108.486 210.736 1.00 0.01 C
ATOM 18 C6 A B 525 -38.335 108.410 210.800 1.00 0.01 C
ATOM 19 N6 A B 525 -37.580 108.360 211.894 1.00 0.01 N
ATOM 20 N1 A B 525 -37.669 108.380 209.658 1.00 0.01 N
ATOM 21 C2 A B 525 -38.397 108.421 208.562 1.00 0.01 C
ATOM 22 N3 A B 525 -39.707 108.482 208.386 1.00 0.01 N
ATOM 23 C4 A B 525 -40.346 108.513 209.518 1.00 0.01 C
ATOM 24 P C B 526 -47.407 107.074 209.322 1.00 0.01 P
ATOM 25 OP1 C B 526 -47.702 108.226 210.157 1.00 0.01 O
ATOM 26 OP2 C B 526 -47.065 105.822 209.984 1.00 0.01 O
ATOM 27 O5' C B 526 -48.585 106.838 208.279 1.00 0.01 O
TER
ATOM 2 P A A 12 -35.823 110.583 218.001 1.00 1.83 P
ATOM 3 OP1 A A 12 -34.383 110.199 218.116 1.00 1.83 O
ATOM 4 OP2 A A 12 -36.244 111.936 218.455 1.00 1.83 O
ATOM 5 O5' A A 12 -36.294 110.364 216.483 1.00 1.83 O
ATOM 6 C5' A A 12 -35.367 109.867 215.513 1.00 1.83 C
ATOM 7 C4' A A 12 -35.346 110.651 214.202 1.00 1.83 C
ATOM 8 O4' A A 12 -36.644 110.606 213.570 1.00 1.83 O
ATOM 9 C3' A A 12 -34.924 112.110 214.269 1.00 1.83 C
ATOM 10 O3' A A 12 -34.015 112.391 213.192 1.00 1.83 O
ATOM 11 C2' A A 12 -36.233 112.878 214.051 1.00 1.83 C
ATOM 12 O2' A A 12 -36.077 114.113 213.372 1.00 1.83 O
ATOM 13 C1' A A 12 -37.090 111.898 213.237 1.00 1.83 C
ATOM 14 N9 A A 12 -38.508 111.929 213.576 1.00 1.61 N
ATOM 15 C8 A A 12 -38.902 111.707 214.854 1.00 1.61 C
ATOM 16 N7 A A 12 -40.183 111.685 215.055 1.00 1.61 N
ATOM 17 C5 A A 12 -40.679 111.882 213.807 1.00 1.61 C
ATOM 18 C6 A A 12 -42.007 111.955 213.402 1.00 1.61 C
ATOM 19 N6 A A 12 -43.020 111.838 214.256 1.00 1.61 N
ATOM 20 N1 A A 12 -42.240 112.132 212.090 1.00 1.61 N
ATOM 21 C2 A A 12 -41.159 112.233 211.305 1.00 1.61 C
ATOM 22 N3 A A 12 -39.856 112.189 211.602 1.00 1.61 N
ATOM 23 C4 A A 12 -39.668 112.009 212.885 1.00 1.61 C
ATOM 24 P A A 13 -32.523 111.735 213.170 1.00 1.14 P
ATOM 25 OP1 A A 13 -32.515 110.557 214.092 1.00 1.14 O
ATOM 26 OP2 A A 13 -31.556 112.835 213.415 1.00 1.14 O
ATOM 27 O5' A A 13 -32.378 111.218 211.686 1.00 1.14 O
TER
ATOM 1 O3' U B 524 -46.605 112.825 210.850 1.00 0.01 O
ATOM 2 P A B 525 -46.516 111.360 211.468 1.00 0.01 P
ATOM 3 OP1 A B 525 -47.843 110.746 211.328 1.00 0.01 O
ATOM 4 OP2 A B 525 -45.933 111.495 212.819 1.00 0.01 O
ATOM 5 O5' A B 525 -45.478 110.655 210.501 1.00 0.01 O
ATOM 6 C5' A B 525 -45.708 110.586 209.118 1.00 0.01 C
ATOM 7 C4' A B 525 -44.837 109.544 208.487 1.00 0.01 C
ATOM 8 O4' A B 525 -43.452 109.818 208.777 1.00 0.01 O
ATOM 9 C3' A B 525 -45.025 108.122 208.982 1.00 0.01 C
ATOM 10 O3' A B 525 -46.157 107.478 208.397 1.00 0.01 O
ATOM 11 C2' A B 525 -43.694 107.461 208.631 1.00 0.01 C
ATOM 12 O2' A B 525 -43.751 106.933 207.328 1.00 0.01 O
ATOM 13 C1' A B 525 -42.712 108.637 208.627 1.00 0.01 C
ATOM 14 N9 A B 525 -41.701 108.561 209.687 1.00 0.01 N
ATOM 15 C8 A B 525 -41.863 108.574 211.029 1.00 0.01 C
ATOM 16 N7 A B 525 -40.730 108.516 211.695 1.00 0.01 N
ATOM 17 C5 A B 525 -39.741 108.486 210.736 1.00 0.01 C
ATOM 18 C6 A B 525 -38.335 108.410 210.800 1.00 0.01 C
ATOM 19 N6 A B 525 -37.580 108.360 211.894 1.00 0.01 N
ATOM 20 N1 A B 525 -37.669 108.380 209.658 1.00 0.01 N
ATOM 21 C2 A B 525 -38.397 108.421 208.562 1.00 0.01 C
ATOM 22 N3 A B 525 -39.707 108.482 208.386 1.00 0.01 N
ATOM 23 C4 A B 525 -40.346 108.513 209.518 1.00 0.01 C
ATOM 24 P C B 526 -47.407 107.074 209.322 1.00 0.01 P
ATOM 25 OP1 C B 526 -47.702 108.226 210.157 1.00 0.01 O
ATOM 26 OP2 C B 526 -47.065 105.822 209.984 1.00 0.01 O
ATOM 27 O5' C B 526 -48.585 106.838 208.279 1.00 0.01 O
TER
Atoms:
OP1: (-34.383,110.199,218.116)
OP2: (-36.244,111.936,218.455)
C3': (-34.924,112.110,214.269)
C1': (-37.090,111.898,213.237)
C5': (-35.367,109.867,215.513)
O4': (-36.644,110.606,213.570)
C8: (-38.902,111.707,214.854)
O2': (-36.077,114.113,213.372)
C6: (-42.007,111.955,213.402)
C5: (-40.679,111.882,213.807)
C4: (-39.668,112.009,212.885)
P: (-35.823,110.583,218.001)
C4': (-35.346,110.651,214.202)
C2': (-36.233,112.878,214.051)
C2: (-41.159,112.233,211.305)
N1: (-42.240,112.132,212.090)
N3: (-39.856,112.189,211.602)
N6: (-43.020,111.838,214.256)
N7: (-40.183,111.685,215.055)
N9: (-38.508,111.929,213.576)
O5': (-36.294,110.364,216.483)
O3': (-34.015,112.391,213.192)
OP2: (-36.244,111.936,218.455)
C3': (-34.924,112.110,214.269)
C1': (-37.090,111.898,213.237)
C5': (-35.367,109.867,215.513)
O4': (-36.644,110.606,213.570)
C8: (-38.902,111.707,214.854)
O2': (-36.077,114.113,213.372)
C6: (-42.007,111.955,213.402)
C5: (-40.679,111.882,213.807)
C4: (-39.668,112.009,212.885)
P: (-35.823,110.583,218.001)
C4': (-35.346,110.651,214.202)
C2': (-36.233,112.878,214.051)
C2: (-41.159,112.233,211.305)
N1: (-42.240,112.132,212.090)
N3: (-39.856,112.189,211.602)
N6: (-43.020,111.838,214.256)
N7: (-40.183,111.685,215.055)
N9: (-38.508,111.929,213.576)
O5': (-36.294,110.364,216.483)
O3': (-34.015,112.391,213.192)
OP1: (-47.843,110.746,211.328)
OP2: (-45.933,111.495,212.819)
C3': (-45.025,108.122,208.982)
C1': (-42.712,108.637,208.627)
C5': (-45.708,110.586,209.118)
O4': (-43.452,109.818,208.777)
C8: (-41.863,108.574,211.029)
O2': (-43.751,106.933,207.328)
C6: (-38.335,108.410,210.800)
C5: (-39.741,108.486,210.736)
C4: (-40.346,108.513,209.518)
P: (-46.516,111.360,211.468)
C4': (-44.837,109.544,208.487)
C2': (-43.694,107.461,208.631)
C2: (-38.397,108.421,208.562)
N1: (-37.669,108.380,209.658)
N3: (-39.707,108.482,208.386)
N6: (-37.580,108.360,211.894)
N7: (-40.730,108.516,211.695)
N9: (-41.701,108.561,209.687)
O5': (-45.478,110.655,210.501)
O3': (-46.157,107.478,208.397)
OP2: (-45.933,111.495,212.819)
C3': (-45.025,108.122,208.982)
C1': (-42.712,108.637,208.627)
C5': (-45.708,110.586,209.118)
O4': (-43.452,109.818,208.777)
C8: (-41.863,108.574,211.029)
O2': (-43.751,106.933,207.328)
C6: (-38.335,108.410,210.800)
C5: (-39.741,108.486,210.736)
C4: (-40.346,108.513,209.518)
P: (-46.516,111.360,211.468)
C4': (-44.837,109.544,208.487)
C2': (-43.694,107.461,208.631)
C2: (-38.397,108.421,208.562)
N1: (-37.669,108.380,209.658)
N3: (-39.707,108.482,208.386)
N6: (-37.580,108.360,211.894)
N7: (-40.730,108.516,211.695)
N9: (-41.701,108.561,209.687)
O5': (-45.478,110.655,210.501)
O3': (-46.157,107.478,208.397)
Image (generated by PyMOL):