Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKI:B20:B49
Extra
PDB:
ATOM 1 O3' U A 19 -9.649 6.807 -22.658 1.00 22.25 O
ATOM 2 P A A 20 -9.681 8.250 -23.353 1.00 24.97 P
ATOM 3 OP1 A A 20 -11.033 8.834 -23.193 1.00 25.62 O
ATOM 4 OP2 A A 20 -9.111 8.090 -24.709 1.00 25.42 O
ATOM 5 O5' A A 20 -8.616 9.069 -22.480 1.00 25.63 O
ATOM 6 C5' A A 20 -9.040 10.023 -21.511 1.00 26.86 C
ATOM 7 C4' A A 20 -8.256 9.923 -20.214 1.00 26.32 C
ATOM 8 O4' A A 20 -8.297 8.576 -19.685 1.00 23.93 O
ATOM 9 C3' A A 20 -6.762 10.190 -20.290 1.00 27.11 C
ATOM 10 O3' A A 20 -6.484 11.573 -20.442 1.00 29.78 O
ATOM 11 C2' A A 20 -6.344 9.686 -18.916 1.00 26.12 C
ATOM 12 O2' A A 20 -6.650 10.620 -17.895 1.00 27.02 O
ATOM 13 C1' A A 20 -7.208 8.427 -18.787 1.00 23.39 C
ATOM 14 N9 A A 20 -6.483 7.202 -19.121 1.00 22.14 N
ATOM 15 C8 A A 20 -6.654 6.422 -20.228 1.00 21.43 C
ATOM 16 N7 A A 20 -5.860 5.382 -20.266 1.00 21.10 N
ATOM 17 C5 A A 20 -5.112 5.482 -19.109 1.00 21.43 C
ATOM 18 C6 A A 20 -4.084 4.677 -18.561 1.00 21.66 C
ATOM 19 N6 A A 20 -3.624 3.568 -19.149 1.00 21.21 N
ATOM 20 N1 A A 20 -3.550 5.057 -17.377 1.00 23.10 N
ATOM 21 C2 A A 20 -4.016 6.168 -16.789 1.00 22.80 C
ATOM 22 N3 A A 20 -4.970 7.002 -17.209 1.00 23.01 N
ATOM 23 C4 A A 20 -5.485 6.598 -18.385 1.00 21.72 C
ATOM 24 P A A 21 -5.153 12.063 -21.186 1.00 32.02 P
ATOM 25 OP1 A A 21 -5.258 13.531 -21.373 1.00 34.98 O
ATOM 26 OP2 A A 21 -4.934 11.192 -22.362 1.00 31.05 O
ATOM 27 O5' A A 21 -4.002 11.739 -20.120 1.00 32.61 O
TER
ATOM 1 O3' U B 48 -4.325 -0.460 -21.216 1.00 30.91 O
ATOM 2 P A B 49 -5.369 -0.824 -20.063 1.00 29.63 P
ATOM 3 OP1 A B 49 -5.136 -2.212 -19.608 1.00 29.62 O
ATOM 4 OP2 A B 49 -6.711 -0.424 -20.539 1.00 29.42 O
ATOM 5 O5' A B 49 -4.913 0.196 -18.922 1.00 28.42 O
ATOM 6 C5' A B 49 -3.712 -0.026 -18.195 1.00 28.75 C
ATOM 7 C4' A B 49 -3.832 0.567 -16.805 1.00 28.64 C
ATOM 8 O4' A B 49 -4.359 1.913 -16.919 1.00 27.84 O
ATOM 9 C3' A B 49 -4.765 -0.185 -15.852 1.00 28.38 C
ATOM 10 O3' A B 49 -4.151 -0.322 -14.590 1.00 29.84 O
ATOM 11 C2' A B 49 -5.993 0.712 -15.743 1.00 27.01 C
ATOM 12 O2' A B 49 -6.587 0.671 -14.461 1.00 26.41 O
ATOM 13 C1' A B 49 -5.406 2.092 -15.991 1.00 26.50 C
ATOM 14 N9 A B 49 -6.385 2.994 -16.571 1.00 25.93 N
ATOM 15 C8 A B 49 -6.909 2.932 -17.830 1.00 26.79 C
ATOM 16 N7 A B 49 -7.784 3.873 -18.079 1.00 27.06 N
ATOM 17 C5 A B 49 -7.845 4.596 -16.904 1.00 25.80 C
ATOM 18 C6 A B 49 -8.594 5.729 -16.526 1.00 25.71 C
ATOM 19 N6 A B 49 -9.457 6.332 -17.338 1.00 25.77 N
ATOM 20 N1 A B 49 -8.423 6.208 -15.273 1.00 25.26 N
ATOM 21 C2 A B 49 -7.556 5.583 -14.456 1.00 24.71 C
ATOM 22 N3 A B 49 -6.793 4.514 -14.705 1.00 24.59 N
ATOM 23 C4 A B 49 -6.986 4.068 -15.958 1.00 25.11 C
ATOM 24 P U B 50 -3.682 -1.749 -14.044 1.00 31.68 P
ATOM 25 OP1 U B 50 -2.594 -2.262 -14.914 1.00 32.28 O
ATOM 26 OP2 U B 50 -4.879 -2.579 -13.784 1.00 31.59 O
ATOM 27 O5' U B 50 -3.075 -1.304 -12.641 1.00 32.64 O
TER
ATOM 2 P A A 20 -9.681 8.250 -23.353 1.00 24.97 P
ATOM 3 OP1 A A 20 -11.033 8.834 -23.193 1.00 25.62 O
ATOM 4 OP2 A A 20 -9.111 8.090 -24.709 1.00 25.42 O
ATOM 5 O5' A A 20 -8.616 9.069 -22.480 1.00 25.63 O
ATOM 6 C5' A A 20 -9.040 10.023 -21.511 1.00 26.86 C
ATOM 7 C4' A A 20 -8.256 9.923 -20.214 1.00 26.32 C
ATOM 8 O4' A A 20 -8.297 8.576 -19.685 1.00 23.93 O
ATOM 9 C3' A A 20 -6.762 10.190 -20.290 1.00 27.11 C
ATOM 10 O3' A A 20 -6.484 11.573 -20.442 1.00 29.78 O
ATOM 11 C2' A A 20 -6.344 9.686 -18.916 1.00 26.12 C
ATOM 12 O2' A A 20 -6.650 10.620 -17.895 1.00 27.02 O
ATOM 13 C1' A A 20 -7.208 8.427 -18.787 1.00 23.39 C
ATOM 14 N9 A A 20 -6.483 7.202 -19.121 1.00 22.14 N
ATOM 15 C8 A A 20 -6.654 6.422 -20.228 1.00 21.43 C
ATOM 16 N7 A A 20 -5.860 5.382 -20.266 1.00 21.10 N
ATOM 17 C5 A A 20 -5.112 5.482 -19.109 1.00 21.43 C
ATOM 18 C6 A A 20 -4.084 4.677 -18.561 1.00 21.66 C
ATOM 19 N6 A A 20 -3.624 3.568 -19.149 1.00 21.21 N
ATOM 20 N1 A A 20 -3.550 5.057 -17.377 1.00 23.10 N
ATOM 21 C2 A A 20 -4.016 6.168 -16.789 1.00 22.80 C
ATOM 22 N3 A A 20 -4.970 7.002 -17.209 1.00 23.01 N
ATOM 23 C4 A A 20 -5.485 6.598 -18.385 1.00 21.72 C
ATOM 24 P A A 21 -5.153 12.063 -21.186 1.00 32.02 P
ATOM 25 OP1 A A 21 -5.258 13.531 -21.373 1.00 34.98 O
ATOM 26 OP2 A A 21 -4.934 11.192 -22.362 1.00 31.05 O
ATOM 27 O5' A A 21 -4.002 11.739 -20.120 1.00 32.61 O
TER
ATOM 1 O3' U B 48 -4.325 -0.460 -21.216 1.00 30.91 O
ATOM 2 P A B 49 -5.369 -0.824 -20.063 1.00 29.63 P
ATOM 3 OP1 A B 49 -5.136 -2.212 -19.608 1.00 29.62 O
ATOM 4 OP2 A B 49 -6.711 -0.424 -20.539 1.00 29.42 O
ATOM 5 O5' A B 49 -4.913 0.196 -18.922 1.00 28.42 O
ATOM 6 C5' A B 49 -3.712 -0.026 -18.195 1.00 28.75 C
ATOM 7 C4' A B 49 -3.832 0.567 -16.805 1.00 28.64 C
ATOM 8 O4' A B 49 -4.359 1.913 -16.919 1.00 27.84 O
ATOM 9 C3' A B 49 -4.765 -0.185 -15.852 1.00 28.38 C
ATOM 10 O3' A B 49 -4.151 -0.322 -14.590 1.00 29.84 O
ATOM 11 C2' A B 49 -5.993 0.712 -15.743 1.00 27.01 C
ATOM 12 O2' A B 49 -6.587 0.671 -14.461 1.00 26.41 O
ATOM 13 C1' A B 49 -5.406 2.092 -15.991 1.00 26.50 C
ATOM 14 N9 A B 49 -6.385 2.994 -16.571 1.00 25.93 N
ATOM 15 C8 A B 49 -6.909 2.932 -17.830 1.00 26.79 C
ATOM 16 N7 A B 49 -7.784 3.873 -18.079 1.00 27.06 N
ATOM 17 C5 A B 49 -7.845 4.596 -16.904 1.00 25.80 C
ATOM 18 C6 A B 49 -8.594 5.729 -16.526 1.00 25.71 C
ATOM 19 N6 A B 49 -9.457 6.332 -17.338 1.00 25.77 N
ATOM 20 N1 A B 49 -8.423 6.208 -15.273 1.00 25.26 N
ATOM 21 C2 A B 49 -7.556 5.583 -14.456 1.00 24.71 C
ATOM 22 N3 A B 49 -6.793 4.514 -14.705 1.00 24.59 N
ATOM 23 C4 A B 49 -6.986 4.068 -15.958 1.00 25.11 C
ATOM 24 P U B 50 -3.682 -1.749 -14.044 1.00 31.68 P
ATOM 25 OP1 U B 50 -2.594 -2.262 -14.914 1.00 32.28 O
ATOM 26 OP2 U B 50 -4.879 -2.579 -13.784 1.00 31.59 O
ATOM 27 O5' U B 50 -3.075 -1.304 -12.641 1.00 32.64 O
TER
Atoms:
OP1: (-11.033,8.834,-23.193)
OP2: (-9.111,8.090,-24.709)
C3': (-6.762,10.190,-20.290)
C1': (-7.208,8.427,-18.787)
C5': (-9.040,10.023,-21.511)
O4': (-8.297,8.576,-19.685)
C8: (-6.654,6.422,-20.228)
O2': (-6.650,10.620,-17.895)
C6: (-4.084,4.677,-18.561)
C5: (-5.112,5.482,-19.109)
C4: (-5.485,6.598,-18.385)
P: (-9.681,8.250,-23.353)
C4': (-8.256,9.923,-20.214)
C2': (-6.344,9.686,-18.916)
C2: (-4.016,6.168,-16.789)
N1: (-3.550,5.057,-17.377)
N3: (-4.970,7.002,-17.209)
N6: (-3.624,3.568,-19.149)
N7: (-5.860,5.382,-20.266)
N9: (-6.483,7.202,-19.121)
O5': (-8.616,9.069,-22.480)
O3': (-6.484,11.573,-20.442)
OP2: (-9.111,8.090,-24.709)
C3': (-6.762,10.190,-20.290)
C1': (-7.208,8.427,-18.787)
C5': (-9.040,10.023,-21.511)
O4': (-8.297,8.576,-19.685)
C8: (-6.654,6.422,-20.228)
O2': (-6.650,10.620,-17.895)
C6: (-4.084,4.677,-18.561)
C5: (-5.112,5.482,-19.109)
C4: (-5.485,6.598,-18.385)
P: (-9.681,8.250,-23.353)
C4': (-8.256,9.923,-20.214)
C2': (-6.344,9.686,-18.916)
C2: (-4.016,6.168,-16.789)
N1: (-3.550,5.057,-17.377)
N3: (-4.970,7.002,-17.209)
N6: (-3.624,3.568,-19.149)
N7: (-5.860,5.382,-20.266)
N9: (-6.483,7.202,-19.121)
O5': (-8.616,9.069,-22.480)
O3': (-6.484,11.573,-20.442)
OP1: (-5.136,-2.212,-19.608)
OP2: (-6.711,-0.424,-20.539)
C3': (-4.765,-0.185,-15.852)
C1': (-5.406,2.092,-15.991)
C5': (-3.712,-0.026,-18.195)
O4': (-4.359,1.913,-16.919)
C8: (-6.909,2.932,-17.830)
O2': (-6.587,0.671,-14.461)
C6: (-8.594,5.729,-16.526)
C5: (-7.845,4.596,-16.904)
C4: (-6.986,4.068,-15.958)
P: (-5.369,-0.824,-20.063)
C4': (-3.832,0.567,-16.805)
C2': (-5.993,0.712,-15.743)
C2: (-7.556,5.583,-14.456)
N1: (-8.423,6.208,-15.273)
N3: (-6.793,4.514,-14.705)
N6: (-9.457,6.332,-17.338)
N7: (-7.784,3.873,-18.079)
N9: (-6.385,2.994,-16.571)
O5': (-4.913,0.196,-18.922)
O3': (-4.151,-0.322,-14.590)
OP2: (-6.711,-0.424,-20.539)
C3': (-4.765,-0.185,-15.852)
C1': (-5.406,2.092,-15.991)
C5': (-3.712,-0.026,-18.195)
O4': (-4.359,1.913,-16.919)
C8: (-6.909,2.932,-17.830)
O2': (-6.587,0.671,-14.461)
C6: (-8.594,5.729,-16.526)
C5: (-7.845,4.596,-16.904)
C4: (-6.986,4.068,-15.958)
P: (-5.369,-0.824,-20.063)
C4': (-3.832,0.567,-16.805)
C2': (-5.993,0.712,-15.743)
C2: (-7.556,5.583,-14.456)
N1: (-8.423,6.208,-15.273)
N3: (-6.793,4.514,-14.705)
N6: (-9.457,6.332,-17.338)
N7: (-7.784,3.873,-18.079)
N9: (-6.385,2.994,-16.571)
O5': (-4.913,0.196,-18.922)
O3': (-4.151,-0.322,-14.590)
Image (generated by PyMOL):