Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:B39:B62
Extra
PDB:
ATOM 1 O3' C A 38 6.717 -17.932 14.407 1.00 66.82 O
ATOM 2 P A A 39 7.440 -17.265 13.137 1.00 66.79 P
ATOM 3 OP1 A A 39 8.828 -16.952 13.549 1.00 66.58 O
ATOM 4 OP2 A A 39 6.573 -16.201 12.575 1.00 66.70 O
ATOM 5 O5' A A 39 7.459 -18.474 12.094 1.00 65.48 O
ATOM 6 C5' A A 39 8.412 -19.515 12.245 1.00 64.72 C
ATOM 7 C4' A A 39 8.319 -20.490 11.088 1.00 64.38 C
ATOM 8 O4' A A 39 7.092 -21.251 11.215 1.00 63.84 O
ATOM 9 C3' A A 39 8.228 -19.878 9.694 1.00 64.86 C
ATOM 10 O3' A A 39 9.518 -19.508 9.200 1.00 65.79 O
ATOM 11 C2' A A 39 7.621 -21.039 8.919 1.00 63.84 C
ATOM 12 O2' A A 39 8.567 -22.040 8.594 1.00 63.48 O
ATOM 13 C1' A A 39 6.619 -21.598 9.926 1.00 63.08 C
ATOM 14 N9 A A 39 5.256 -21.094 9.748 1.00 62.20 N
ATOM 15 C8 A A 39 4.694 -19.989 10.327 1.00 62.27 C
ATOM 16 N7 A A 39 3.446 -19.780 9.979 1.00 62.07 N
ATOM 17 C5 A A 39 3.168 -20.820 9.112 1.00 61.34 C
ATOM 18 C6 A A 39 2.009 -21.174 8.394 1.00 61.23 C
ATOM 19 N6 A A 39 0.873 -20.475 8.447 1.00 61.81 N
ATOM 20 N1 A A 39 2.060 -22.275 7.615 1.00 60.87 N
ATOM 21 C2 A A 39 3.202 -22.976 7.559 1.00 60.48 C
ATOM 22 N3 A A 39 4.354 -22.742 8.189 1.00 60.37 N
ATOM 23 C4 A A 39 4.271 -21.640 8.957 1.00 61.22 C
ATOM 24 P A A 40 9.727 -18.268 8.198 1.00 67.04 P
ATOM 25 OP1 A A 40 11.191 -18.067 8.099 1.00 67.13 O
ATOM 26 OP2 A A 40 8.864 -17.131 8.593 1.00 67.35 O
ATOM 27 O5' A A 40 9.159 -18.817 6.809 1.00 67.33 O
TER
ATOM 1 O3' G B 61 -2.939 -17.793 10.386 1.00 70.82 O
ATOM 2 P A B 62 -3.709 -17.950 11.779 1.00 68.58 P
ATOM 3 OP1 A B 62 -4.891 -17.056 11.769 1.00 69.05 O
ATOM 4 OP2 A B 62 -2.721 -17.863 12.879 1.00 68.10 O
ATOM 5 O5' A B 62 -4.205 -19.460 11.692 1.00 66.69 O
ATOM 6 C5' A B 62 -4.899 -19.910 10.540 1.00 64.71 C
ATOM 7 C4' A B 62 -4.451 -21.320 10.222 1.00 62.57 C
ATOM 8 O4' A B 62 -3.117 -21.305 9.660 1.00 61.98 O
ATOM 9 C3' A B 62 -4.261 -22.221 11.427 1.00 61.02 C
ATOM 10 O3' A B 62 -5.507 -22.641 11.949 1.00 59.95 O
ATOM 11 C2' A B 62 -3.485 -23.354 10.774 1.00 60.42 C
ATOM 12 O2' A B 62 -4.306 -24.181 9.972 1.00 60.51 O
ATOM 13 C1' A B 62 -2.514 -22.563 9.902 1.00 60.40 C
ATOM 14 N9 A B 62 -1.201 -22.376 10.516 1.00 59.50 N
ATOM 15 C8 A B 62 -0.765 -21.313 11.260 1.00 59.65 C
ATOM 16 N7 A B 62 0.472 -21.429 11.685 1.00 58.93 N
ATOM 17 C5 A B 62 0.874 -22.656 11.186 1.00 58.35 C
ATOM 18 C6 A B 62 2.088 -23.371 11.276 1.00 57.93 C
ATOM 19 N6 A B 62 3.161 -22.922 11.937 1.00 57.93 N
ATOM 20 N1 A B 62 2.160 -24.573 10.659 1.00 57.57 N
ATOM 21 C2 A B 62 1.086 -25.026 9.995 1.00 57.77 C
ATOM 22 N3 A B 62 -0.105 -24.444 9.841 1.00 57.99 N
ATOM 23 C4 A B 62 -0.144 -23.253 10.464 1.00 58.47 C
ATOM 24 P A B 63 -5.645 -23.008 13.499 1.00 58.11 P
ATOM 25 OP1 A B 63 -7.093 -22.997 13.814 1.00 58.27 O
ATOM 26 OP2 A B 63 -4.729 -22.151 14.286 1.00 58.01 O
ATOM 27 O5' A B 63 -5.075 -24.504 13.537 1.00 56.54 O
TER
ATOM 2 P A A 39 7.440 -17.265 13.137 1.00 66.79 P
ATOM 3 OP1 A A 39 8.828 -16.952 13.549 1.00 66.58 O
ATOM 4 OP2 A A 39 6.573 -16.201 12.575 1.00 66.70 O
ATOM 5 O5' A A 39 7.459 -18.474 12.094 1.00 65.48 O
ATOM 6 C5' A A 39 8.412 -19.515 12.245 1.00 64.72 C
ATOM 7 C4' A A 39 8.319 -20.490 11.088 1.00 64.38 C
ATOM 8 O4' A A 39 7.092 -21.251 11.215 1.00 63.84 O
ATOM 9 C3' A A 39 8.228 -19.878 9.694 1.00 64.86 C
ATOM 10 O3' A A 39 9.518 -19.508 9.200 1.00 65.79 O
ATOM 11 C2' A A 39 7.621 -21.039 8.919 1.00 63.84 C
ATOM 12 O2' A A 39 8.567 -22.040 8.594 1.00 63.48 O
ATOM 13 C1' A A 39 6.619 -21.598 9.926 1.00 63.08 C
ATOM 14 N9 A A 39 5.256 -21.094 9.748 1.00 62.20 N
ATOM 15 C8 A A 39 4.694 -19.989 10.327 1.00 62.27 C
ATOM 16 N7 A A 39 3.446 -19.780 9.979 1.00 62.07 N
ATOM 17 C5 A A 39 3.168 -20.820 9.112 1.00 61.34 C
ATOM 18 C6 A A 39 2.009 -21.174 8.394 1.00 61.23 C
ATOM 19 N6 A A 39 0.873 -20.475 8.447 1.00 61.81 N
ATOM 20 N1 A A 39 2.060 -22.275 7.615 1.00 60.87 N
ATOM 21 C2 A A 39 3.202 -22.976 7.559 1.00 60.48 C
ATOM 22 N3 A A 39 4.354 -22.742 8.189 1.00 60.37 N
ATOM 23 C4 A A 39 4.271 -21.640 8.957 1.00 61.22 C
ATOM 24 P A A 40 9.727 -18.268 8.198 1.00 67.04 P
ATOM 25 OP1 A A 40 11.191 -18.067 8.099 1.00 67.13 O
ATOM 26 OP2 A A 40 8.864 -17.131 8.593 1.00 67.35 O
ATOM 27 O5' A A 40 9.159 -18.817 6.809 1.00 67.33 O
TER
ATOM 1 O3' G B 61 -2.939 -17.793 10.386 1.00 70.82 O
ATOM 2 P A B 62 -3.709 -17.950 11.779 1.00 68.58 P
ATOM 3 OP1 A B 62 -4.891 -17.056 11.769 1.00 69.05 O
ATOM 4 OP2 A B 62 -2.721 -17.863 12.879 1.00 68.10 O
ATOM 5 O5' A B 62 -4.205 -19.460 11.692 1.00 66.69 O
ATOM 6 C5' A B 62 -4.899 -19.910 10.540 1.00 64.71 C
ATOM 7 C4' A B 62 -4.451 -21.320 10.222 1.00 62.57 C
ATOM 8 O4' A B 62 -3.117 -21.305 9.660 1.00 61.98 O
ATOM 9 C3' A B 62 -4.261 -22.221 11.427 1.00 61.02 C
ATOM 10 O3' A B 62 -5.507 -22.641 11.949 1.00 59.95 O
ATOM 11 C2' A B 62 -3.485 -23.354 10.774 1.00 60.42 C
ATOM 12 O2' A B 62 -4.306 -24.181 9.972 1.00 60.51 O
ATOM 13 C1' A B 62 -2.514 -22.563 9.902 1.00 60.40 C
ATOM 14 N9 A B 62 -1.201 -22.376 10.516 1.00 59.50 N
ATOM 15 C8 A B 62 -0.765 -21.313 11.260 1.00 59.65 C
ATOM 16 N7 A B 62 0.472 -21.429 11.685 1.00 58.93 N
ATOM 17 C5 A B 62 0.874 -22.656 11.186 1.00 58.35 C
ATOM 18 C6 A B 62 2.088 -23.371 11.276 1.00 57.93 C
ATOM 19 N6 A B 62 3.161 -22.922 11.937 1.00 57.93 N
ATOM 20 N1 A B 62 2.160 -24.573 10.659 1.00 57.57 N
ATOM 21 C2 A B 62 1.086 -25.026 9.995 1.00 57.77 C
ATOM 22 N3 A B 62 -0.105 -24.444 9.841 1.00 57.99 N
ATOM 23 C4 A B 62 -0.144 -23.253 10.464 1.00 58.47 C
ATOM 24 P A B 63 -5.645 -23.008 13.499 1.00 58.11 P
ATOM 25 OP1 A B 63 -7.093 -22.997 13.814 1.00 58.27 O
ATOM 26 OP2 A B 63 -4.729 -22.151 14.286 1.00 58.01 O
ATOM 27 O5' A B 63 -5.075 -24.504 13.537 1.00 56.54 O
TER
Atoms:
OP1: (8.828,-16.952,13.549)
OP2: (6.573,-16.201,12.575)
C3': (8.228,-19.878,9.694)
C1': (6.619,-21.598,9.926)
C5': (8.412,-19.515,12.245)
O4': (7.092,-21.251,11.215)
C8: (4.694,-19.989,10.327)
O2': (8.567,-22.040,8.594)
C6: (2.009,-21.174,8.394)
C5: (3.168,-20.820,9.112)
C4: (4.271,-21.640,8.957)
P: (7.440,-17.265,13.137)
C4': (8.319,-20.490,11.088)
C2': (7.621,-21.039,8.919)
C2: (3.202,-22.976,7.559)
N1: (2.060,-22.275,7.615)
N3: (4.354,-22.742,8.189)
N6: (0.873,-20.475,8.447)
N7: (3.446,-19.780,9.979)
N9: (5.256,-21.094,9.748)
O5': (7.459,-18.474,12.094)
O3': (9.518,-19.508,9.200)
OP2: (6.573,-16.201,12.575)
C3': (8.228,-19.878,9.694)
C1': (6.619,-21.598,9.926)
C5': (8.412,-19.515,12.245)
O4': (7.092,-21.251,11.215)
C8: (4.694,-19.989,10.327)
O2': (8.567,-22.040,8.594)
C6: (2.009,-21.174,8.394)
C5: (3.168,-20.820,9.112)
C4: (4.271,-21.640,8.957)
P: (7.440,-17.265,13.137)
C4': (8.319,-20.490,11.088)
C2': (7.621,-21.039,8.919)
C2: (3.202,-22.976,7.559)
N1: (2.060,-22.275,7.615)
N3: (4.354,-22.742,8.189)
N6: (0.873,-20.475,8.447)
N7: (3.446,-19.780,9.979)
N9: (5.256,-21.094,9.748)
O5': (7.459,-18.474,12.094)
O3': (9.518,-19.508,9.200)
OP1: (-4.891,-17.056,11.769)
OP2: (-2.721,-17.863,12.879)
C3': (-4.261,-22.221,11.427)
C1': (-2.514,-22.563,9.902)
C5': (-4.899,-19.910,10.540)
O4': (-3.117,-21.305,9.660)
C8: (-0.765,-21.313,11.260)
O2': (-4.306,-24.181,9.972)
C6: (2.088,-23.371,11.276)
C5: (0.874,-22.656,11.186)
C4: (-0.144,-23.253,10.464)
P: (-3.709,-17.950,11.779)
C4': (-4.451,-21.320,10.222)
C2': (-3.485,-23.354,10.774)
C2: (1.086,-25.026,9.995)
N1: (2.160,-24.573,10.659)
N3: (-0.105,-24.444,9.841)
N6: (3.161,-22.922,11.937)
N7: (0.472,-21.429,11.685)
N9: (-1.201,-22.376,10.516)
O5': (-4.205,-19.460,11.692)
O3': (-5.507,-22.641,11.949)
OP2: (-2.721,-17.863,12.879)
C3': (-4.261,-22.221,11.427)
C1': (-2.514,-22.563,9.902)
C5': (-4.899,-19.910,10.540)
O4': (-3.117,-21.305,9.660)
C8: (-0.765,-21.313,11.260)
O2': (-4.306,-24.181,9.972)
C6: (2.088,-23.371,11.276)
C5: (0.874,-22.656,11.186)
C4: (-0.144,-23.253,10.464)
P: (-3.709,-17.950,11.779)
C4': (-4.451,-21.320,10.222)
C2': (-3.485,-23.354,10.774)
C2: (1.086,-25.026,9.995)
N1: (2.160,-24.573,10.659)
N3: (-0.105,-24.444,9.841)
N6: (3.161,-22.922,11.937)
N7: (0.472,-21.429,11.685)
N9: (-1.201,-22.376,10.516)
O5': (-4.205,-19.460,11.692)
O3': (-5.507,-22.641,11.949)
Image (generated by PyMOL):