Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1221:A1558
Extra
PDB:
ATOM 1 O3' G A1220 -42.770 -64.441 1.860 1.00 13.40 O
ATOM 2 P A A1221 -41.186 -64.666 1.776 1.00 8.84 P
ATOM 3 OP1 A A1221 -40.919 -65.633 0.674 1.00 45.50 O
ATOM 4 OP2 A A1221 -40.730 -64.983 3.149 1.00 45.69 O
ATOM 5 O5' A A1221 -40.626 -63.228 1.379 1.00 28.35 O
ATOM 6 C5' A A1221 -40.596 -62.789 0.005 1.00 28.35 C
ATOM 7 C4' A A1221 -41.975 -62.329 -0.444 1.00 28.35 C
ATOM 8 O4' A A1221 -42.410 -61.155 0.304 1.00 28.35 O
ATOM 9 C3' A A1221 -42.071 -61.943 -1.921 1.00 28.35 C
ATOM 10 O3' A A1221 -43.318 -62.364 -2.458 1.00 28.35 O
ATOM 11 C2' A A1221 -42.089 -60.422 -1.887 1.00 28.35 C
ATOM 12 O2' A A1221 -42.776 -59.855 -2.982 1.00 28.35 O
ATOM 13 C1' A A1221 -42.873 -60.183 -0.607 1.00 28.35 C
ATOM 14 N9 A A1221 -42.706 -58.838 -0.064 1.00 31.63 N
ATOM 15 C8 A A1221 -41.712 -58.297 0.711 1.00 31.66 C
ATOM 16 N7 A A1221 -41.889 -57.023 0.974 1.00 31.68 N
ATOM 17 C5 A A1221 -43.083 -56.710 0.330 1.00 31.80 C
ATOM 18 C6 A A1221 -43.813 -55.513 0.200 1.00 31.76 C
ATOM 19 N6 A A1221 -43.443 -54.349 0.734 1.00 31.74 N
ATOM 20 N1 A A1221 -44.952 -55.552 -0.515 1.00 31.73 N
ATOM 21 C2 A A1221 -45.324 -56.708 -1.062 1.00 31.70 C
ATOM 22 N3 A A1221 -44.731 -57.886 -1.018 1.00 31.78 N
ATOM 23 C4 A A1221 -43.599 -57.820 -0.299 1.00 31.77 C
ATOM 24 P U A1222 -43.358 -63.508 -3.583 1.00 35.26 P
ATOM 25 OP1 U A1222 -44.514 -63.218 -4.474 1.00 33.19 O
ATOM 26 OP2 U A1222 -43.270 -64.825 -2.892 1.00 33.01 O
ATOM 27 O5' U A1222 -41.997 -63.323 -4.389 1.00 12.00 O
TER
ATOM 1 O3' C B1557 -44.004 -61.880 8.141 1.00 3.56 O
ATOM 2 P A B1558 -43.418 -61.383 6.724 1.00 0.79 P
ATOM 3 OP1 A B1558 -44.487 -61.624 5.734 1.00 0.79 O
ATOM 4 OP2 A B1558 -42.084 -61.977 6.526 1.00 0.79 O
ATOM 5 O5' A B1558 -43.289 -59.792 6.786 1.00 9.28 O
ATOM 6 C5' A B1558 -42.082 -59.127 6.317 1.00 9.28 C
ATOM 7 C4' A B1558 -42.385 -58.033 5.297 1.00 9.28 C
ATOM 8 O4' A B1558 -42.922 -58.606 4.077 1.00 9.28 O
ATOM 9 C3' A B1558 -43.299 -56.863 5.668 1.00 9.28 C
ATOM 10 O3' A B1558 -42.761 -55.643 5.130 1.00 9.28 O
ATOM 11 C2' A B1558 -44.556 -57.145 4.847 1.00 9.28 C
ATOM 12 O2' A B1558 -45.202 -55.945 4.482 1.00 9.28 O
ATOM 13 C1' A B1558 -43.962 -57.788 3.597 1.00 9.28 C
ATOM 14 N9 A B1558 -44.860 -58.587 2.759 1.00 10.72 N
ATOM 15 C8 A B1558 -44.747 -59.910 2.427 1.00 10.72 C
ATOM 16 N7 A B1558 -45.704 -60.347 1.651 1.00 10.72 N
ATOM 17 C5 A B1558 -46.508 -59.236 1.464 1.00 10.72 C
ATOM 18 C6 A B1558 -47.704 -59.044 0.751 1.00 10.72 C
ATOM 19 N6 A B1558 -48.319 -60.005 0.066 1.00 10.72 N
ATOM 20 N1 A B1558 -48.257 -57.817 0.763 1.00 10.72 N
ATOM 21 C2 A B1558 -47.639 -56.852 1.450 1.00 10.72 C
ATOM 22 N3 A B1558 -46.514 -56.908 2.164 1.00 10.72 N
ATOM 23 C4 A B1558 -45.995 -58.144 2.132 1.00 10.72 C
ATOM 24 P G B1559 -42.156 -54.504 6.106 1.00 18.28 P
ATOM 25 OP1 G B1559 -41.907 -53.293 5.270 1.00 32.88 O
ATOM 26 OP2 G B1559 -41.038 -55.104 6.883 1.00 32.88 O
ATOM 27 O5' G B1559 -43.338 -54.151 7.111 1.00 3.31 O
TER
ATOM 2 P A A1221 -41.186 -64.666 1.776 1.00 8.84 P
ATOM 3 OP1 A A1221 -40.919 -65.633 0.674 1.00 45.50 O
ATOM 4 OP2 A A1221 -40.730 -64.983 3.149 1.00 45.69 O
ATOM 5 O5' A A1221 -40.626 -63.228 1.379 1.00 28.35 O
ATOM 6 C5' A A1221 -40.596 -62.789 0.005 1.00 28.35 C
ATOM 7 C4' A A1221 -41.975 -62.329 -0.444 1.00 28.35 C
ATOM 8 O4' A A1221 -42.410 -61.155 0.304 1.00 28.35 O
ATOM 9 C3' A A1221 -42.071 -61.943 -1.921 1.00 28.35 C
ATOM 10 O3' A A1221 -43.318 -62.364 -2.458 1.00 28.35 O
ATOM 11 C2' A A1221 -42.089 -60.422 -1.887 1.00 28.35 C
ATOM 12 O2' A A1221 -42.776 -59.855 -2.982 1.00 28.35 O
ATOM 13 C1' A A1221 -42.873 -60.183 -0.607 1.00 28.35 C
ATOM 14 N9 A A1221 -42.706 -58.838 -0.064 1.00 31.63 N
ATOM 15 C8 A A1221 -41.712 -58.297 0.711 1.00 31.66 C
ATOM 16 N7 A A1221 -41.889 -57.023 0.974 1.00 31.68 N
ATOM 17 C5 A A1221 -43.083 -56.710 0.330 1.00 31.80 C
ATOM 18 C6 A A1221 -43.813 -55.513 0.200 1.00 31.76 C
ATOM 19 N6 A A1221 -43.443 -54.349 0.734 1.00 31.74 N
ATOM 20 N1 A A1221 -44.952 -55.552 -0.515 1.00 31.73 N
ATOM 21 C2 A A1221 -45.324 -56.708 -1.062 1.00 31.70 C
ATOM 22 N3 A A1221 -44.731 -57.886 -1.018 1.00 31.78 N
ATOM 23 C4 A A1221 -43.599 -57.820 -0.299 1.00 31.77 C
ATOM 24 P U A1222 -43.358 -63.508 -3.583 1.00 35.26 P
ATOM 25 OP1 U A1222 -44.514 -63.218 -4.474 1.00 33.19 O
ATOM 26 OP2 U A1222 -43.270 -64.825 -2.892 1.00 33.01 O
ATOM 27 O5' U A1222 -41.997 -63.323 -4.389 1.00 12.00 O
TER
ATOM 1 O3' C B1557 -44.004 -61.880 8.141 1.00 3.56 O
ATOM 2 P A B1558 -43.418 -61.383 6.724 1.00 0.79 P
ATOM 3 OP1 A B1558 -44.487 -61.624 5.734 1.00 0.79 O
ATOM 4 OP2 A B1558 -42.084 -61.977 6.526 1.00 0.79 O
ATOM 5 O5' A B1558 -43.289 -59.792 6.786 1.00 9.28 O
ATOM 6 C5' A B1558 -42.082 -59.127 6.317 1.00 9.28 C
ATOM 7 C4' A B1558 -42.385 -58.033 5.297 1.00 9.28 C
ATOM 8 O4' A B1558 -42.922 -58.606 4.077 1.00 9.28 O
ATOM 9 C3' A B1558 -43.299 -56.863 5.668 1.00 9.28 C
ATOM 10 O3' A B1558 -42.761 -55.643 5.130 1.00 9.28 O
ATOM 11 C2' A B1558 -44.556 -57.145 4.847 1.00 9.28 C
ATOM 12 O2' A B1558 -45.202 -55.945 4.482 1.00 9.28 O
ATOM 13 C1' A B1558 -43.962 -57.788 3.597 1.00 9.28 C
ATOM 14 N9 A B1558 -44.860 -58.587 2.759 1.00 10.72 N
ATOM 15 C8 A B1558 -44.747 -59.910 2.427 1.00 10.72 C
ATOM 16 N7 A B1558 -45.704 -60.347 1.651 1.00 10.72 N
ATOM 17 C5 A B1558 -46.508 -59.236 1.464 1.00 10.72 C
ATOM 18 C6 A B1558 -47.704 -59.044 0.751 1.00 10.72 C
ATOM 19 N6 A B1558 -48.319 -60.005 0.066 1.00 10.72 N
ATOM 20 N1 A B1558 -48.257 -57.817 0.763 1.00 10.72 N
ATOM 21 C2 A B1558 -47.639 -56.852 1.450 1.00 10.72 C
ATOM 22 N3 A B1558 -46.514 -56.908 2.164 1.00 10.72 N
ATOM 23 C4 A B1558 -45.995 -58.144 2.132 1.00 10.72 C
ATOM 24 P G B1559 -42.156 -54.504 6.106 1.00 18.28 P
ATOM 25 OP1 G B1559 -41.907 -53.293 5.270 1.00 32.88 O
ATOM 26 OP2 G B1559 -41.038 -55.104 6.883 1.00 32.88 O
ATOM 27 O5' G B1559 -43.338 -54.151 7.111 1.00 3.31 O
TER
Atoms:
OP1: (-40.919,-65.633,0.674)
OP2: (-40.730,-64.983,3.149)
C3': (-42.071,-61.943,-1.921)
C1': (-42.873,-60.183,-0.607)
C5': (-40.596,-62.789,0.005)
O4': (-42.410,-61.155,0.304)
C8: (-41.712,-58.297,0.711)
O2': (-42.776,-59.855,-2.982)
C6: (-43.813,-55.513,0.200)
C5: (-43.083,-56.710,0.330)
C4: (-43.599,-57.820,-0.299)
P: (-41.186,-64.666,1.776)
C4': (-41.975,-62.329,-0.444)
C2': (-42.089,-60.422,-1.887)
C2: (-45.324,-56.708,-1.062)
N1: (-44.952,-55.552,-0.515)
N3: (-44.731,-57.886,-1.018)
N6: (-43.443,-54.349,0.734)
N7: (-41.889,-57.023,0.974)
N9: (-42.706,-58.838,-0.064)
O5': (-40.626,-63.228,1.379)
O3': (-43.318,-62.364,-2.458)
OP2: (-40.730,-64.983,3.149)
C3': (-42.071,-61.943,-1.921)
C1': (-42.873,-60.183,-0.607)
C5': (-40.596,-62.789,0.005)
O4': (-42.410,-61.155,0.304)
C8: (-41.712,-58.297,0.711)
O2': (-42.776,-59.855,-2.982)
C6: (-43.813,-55.513,0.200)
C5: (-43.083,-56.710,0.330)
C4: (-43.599,-57.820,-0.299)
P: (-41.186,-64.666,1.776)
C4': (-41.975,-62.329,-0.444)
C2': (-42.089,-60.422,-1.887)
C2: (-45.324,-56.708,-1.062)
N1: (-44.952,-55.552,-0.515)
N3: (-44.731,-57.886,-1.018)
N6: (-43.443,-54.349,0.734)
N7: (-41.889,-57.023,0.974)
N9: (-42.706,-58.838,-0.064)
O5': (-40.626,-63.228,1.379)
O3': (-43.318,-62.364,-2.458)
OP1: (-44.487,-61.624,5.734)
OP2: (-42.084,-61.977,6.526)
C3': (-43.299,-56.863,5.668)
C1': (-43.962,-57.788,3.597)
C5': (-42.082,-59.127,6.317)
O4': (-42.922,-58.606,4.077)
C8: (-44.747,-59.910,2.427)
O2': (-45.202,-55.945,4.482)
C6: (-47.704,-59.044,0.751)
C5: (-46.508,-59.236,1.464)
C4: (-45.995,-58.144,2.132)
P: (-43.418,-61.383,6.724)
C4': (-42.385,-58.033,5.297)
C2': (-44.556,-57.145,4.847)
C2: (-47.639,-56.852,1.450)
N1: (-48.257,-57.817,0.763)
N3: (-46.514,-56.908,2.164)
N6: (-48.319,-60.005,0.066)
N7: (-45.704,-60.347,1.651)
N9: (-44.860,-58.587,2.759)
O5': (-43.289,-59.792,6.786)
O3': (-42.761,-55.643,5.130)
OP2: (-42.084,-61.977,6.526)
C3': (-43.299,-56.863,5.668)
C1': (-43.962,-57.788,3.597)
C5': (-42.082,-59.127,6.317)
O4': (-42.922,-58.606,4.077)
C8: (-44.747,-59.910,2.427)
O2': (-45.202,-55.945,4.482)
C6: (-47.704,-59.044,0.751)
C5: (-46.508,-59.236,1.464)
C4: (-45.995,-58.144,2.132)
P: (-43.418,-61.383,6.724)
C4': (-42.385,-58.033,5.297)
C2': (-44.556,-57.145,4.847)
C2: (-47.639,-56.852,1.450)
N1: (-48.257,-57.817,0.763)
N3: (-46.514,-56.908,2.164)
N6: (-48.319,-60.005,0.066)
N7: (-45.704,-60.347,1.651)
N9: (-44.860,-58.587,2.759)
O5': (-43.289,-59.792,6.786)
O3': (-42.761,-55.643,5.130)
Image (generated by PyMOL):